RNA–Protein interactions for RNA: ENST00000626000.1

SNRPA1-216, Transcript of small nuclear ribonucleoprotein polypeptide A', humanhuman

TSL 5 BASIC

Gene SNRPA1, Length 539 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRPA1-216ENST00000626000 ZNF273Q14593 569 aa11.47□□□□□ -0.57
SNRPA1-216ENST00000626000 CD200R1LQ6Q8B3 271 aa11.47□□□□□ -0.57
SNRPA1-216ENST00000626000 RNF144BQ7Z419 303 aa11.47□□□□□ -0.57
SNRPA1-216ENST00000626000 LRRTM1Q86UE6 522 aa11.47□□□□□ -0.57
SNRPA1-216ENST00000626000 LYPD6Q86Y78 171 aa11.47□□□□□ -0.57
SNRPA1-216ENST00000626000 LDLRAD3Q86YD5 345 aa11.47□□□□□ -0.57
SNRPA1-216ENST00000626000 OR10K1Q8NGX5 313 aa11.47□□□□□ -0.57
SNRPA1-216ENST00000626000 SPATA3Q8NHX4 192 aa11.47□□□□□ -0.57
SNRPA1-216ENST00000626000 KCNG3Q8TAE7 436 aa11.47□□□□□ -0.57
SNRPA1-216ENST00000626000 TRAV1-2A0A0B4J238 106 aa11.46□□□□□ -0.57
SNRPA1-216ENST00000626000 TRDV1A0A1B0GX56 115 aa11.46□□□□□ -0.57
SNRPA1-216ENST00000626000 RNASE1P07998 156 aaKnown RBP11.46□□□□□ -0.57
SNRPA1-216ENST00000626000 IGHV1-8P0DP01 117 aa11.46□□□□□ -0.57
SNRPA1-216ENST00000626000 CALCBP10092 127 aa11.46□□□□□ -0.57
SNRPA1-216ENST00000626000 MGMTP16455 207 aa11.46□□□□□ -0.57
SNRPA1-216ENST00000626000 CALRP27797 417 aaKnown RBP11.46□□□□□ -0.57
SNRPA1-216ENST00000626000 PSMB9P28065 219 aa11.46□□□□□ -0.57
SNRPA1-216ENST00000626000 UBA52P62987 128 aaKnown RBP11.46□□□□□ -0.57
SNRPA1-216ENST00000626000 FABP5Q01469 135 aa11.46□□□□□ -0.57
SNRPA1-216ENST00000626000 AANATQ16613 207 aa11.46□□□□□ -0.57
SNRPA1-216ENST00000626000 PIGYQ3MUY2 71 aa11.46□□□□□ -0.57
SNRPA1-216ENST00000626000 Q6YL49 198 aa11.46□□□□□ -0.57
SNRPA1-216ENST00000626000 RTN4RL2Q86UN3 420 aa11.46□□□□□ -0.57
SNRPA1-216ENST00000626000 BCL6BQ8N143 479 aaPredicted RBP11.46□□□□□ -0.57
SNRPA1-216ENST00000626000 OR4D6Q8NGJ1 314 aa11.46□□□□□ -0.57
SNRPA1-216ENST00000626000 CREB3L1Q96BA8 519 aa11.46□□□□□ -0.57
SNRPA1-216ENST00000626000 DPCDQ9BVM2 203 aaPredicted RBP11.46□□□□□ -0.57
SNRPA1-216ENST00000626000 PLGRKTQ9HBL7 147 aa11.46□□□□□ -0.57
SNRPA1-216ENST00000626000 TBL2Q9Y4P3 447 aaKnown RBP11.46□□□□□ -0.57
SNRPA1-216ENST00000626000 SESN1Q9Y6P5 492 aa11.46□□□□□ -0.57
SNRPA1-216ENST00000626000 TRAV24A0A0B4J272 114 aa11.45□□□□□ -0.58
SNRPA1-216ENST00000626000 TMEM30CPA0ZSE6 113 aa11.45□□□□□ -0.58
SNRPA1-216ENST00000626000 MEIOCA2RUB1 952 aa11.45□□□□□ -0.58
SNRPA1-216ENST00000626000 DNAJC9-AS1A6NH13 148 aa11.45□□□□□ -0.58
SNRPA1-216ENST00000626000 MCRIP1C9JLW8 97 aa11.45□□□□□ -0.58
SNRPA1-216ENST00000626000 SLC17A2O00624 439 aa11.45□□□□□ -0.58
SNRPA1-216ENST00000626000 GEMIN2O14893 280 aaKnown RBP11.45□□□□□ -0.58
SNRPA1-216ENST00000626000 SLC22A1O15245 554 aa11.45□□□□□ -0.58
SNRPA1-216ENST00000626000 CRTAPO75718 401 aaPredicted RBP11.45□□□□□ -0.58
SNRPA1-216ENST00000626000 CCL3L1P16619 93 aa11.45□□□□□ -0.58
SNRPA1-216ENST00000626000 FGF9P31371 208 aaPredicted RBP11.45□□□□□ -0.58
SNRPA1-216ENST00000626000 SAA4P35542 130 aa11.45□□□□□ -0.58
SNRPA1-216ENST00000626000 DLX6P56179 175 aa11.45□□□□□ -0.58
SNRPA1-216ENST00000626000 AESQ08117 197 aa11.45□□□□□ -0.58
SNRPA1-216ENST00000626000 INSL4Q14641 139 aa11.45□□□□□ -0.58
SNRPA1-216ENST00000626000 DEFB112Q30KQ8 113 aa11.45□□□□□ -0.58
SNRPA1-216ENST00000626000 KRTAP24-1Q3LI83 254 aa11.45□□□□□ -0.58
SNRPA1-216ENST00000626000 TMEM30BQ3MIR4 351 aa11.45□□□□□ -0.58
SNRPA1-216ENST00000626000 FAM27D1Q5T7N8 215 aa11.45□□□□□ -0.58
SNRPA1-216ENST00000626000 RUSC1-AS1Q66K80 236 aa11.45□□□□□ -0.58
SNRPA1-216ENST00000626000 SLC35E4Q6ICL7 350 aa11.45□□□□□ -0.58
SNRPA1-216ENST00000626000 TRAT1Q6PIZ9 186 aa11.45□□□□□ -0.58
SNRPA1-216ENST00000626000 HEPN1Q6WQI6 88 aa11.45□□□□□ -0.58
SNRPA1-216ENST00000626000 TMEM91Q6ZNR0 172 aa11.45□□□□□ -0.58
SNRPA1-216ENST00000626000 OR2W3Q7Z3T1 314 aa11.45□□□□□ -0.58
SNRPA1-216ENST00000626000 C11orf42Q8N5U0 333 aa11.45□□□□□ -0.58
SNRPA1-216ENST00000626000 ZDHHC22Q8N966 263 aa11.45□□□□□ -0.58
SNRPA1-216ENST00000626000 SUMF2Q8NBJ7 301 aa11.45□□□□□ -0.58
SNRPA1-216ENST00000626000 OR11H6Q8NGC7 330 aa11.45□□□□□ -0.58
SNRPA1-216ENST00000626000 OR10A7Q8NGE5 316 aa11.45□□□□□ -0.58
SNRPA1-216ENST00000626000 OR5R1Q8NH85 324 aa11.45□□□□□ -0.58
SNRPA1-216ENST00000626000 NEK7Q8TDX7 302 aa11.45□□□□□ -0.58
SNRPA1-216ENST00000626000 URM1Q9BTM9 101 aaKnown RBP11.45□□□□□ -0.58
SNRPA1-216ENST00000626000 C19orf24Q9BVV8 132 aa11.45□□□□□ -0.58
SNRPA1-216ENST00000626000 RCC2Q9P258 522 aaKnown RBP11.45□□□□□ -0.58
SNRPA1-216ENST00000626000 COL6A5A8TX70 2615 aa11.45□□□□□ -0.58
SNRPA1-216ENST00000626000 A0A087WXM4 84 aa11.44□□□□□ -0.58
SNRPA1-216ENST00000626000 MEIKINA0A087WXM9 373 aa11.44□□□□□ -0.58
SNRPA1-216ENST00000626000 GZMHP20718 246 aa11.44□□□□□ -0.58
SNRPA1-216ENST00000626000 FUT3P21217 361 aa11.44□□□□□ -0.58
SNRPA1-216ENST00000626000 ARHGDIBP52566 201 aa11.44□□□□□ -0.58
SNRPA1-216ENST00000626000 ACTG1P63261 375 aa11.44□□□□□ -0.58
SNRPA1-216ENST00000626000 ATXN7L3Q14CW9 347 aaPredicted RBP11.44□□□□□ -0.58
SNRPA1-216ENST00000626000 SSX1Q16384 188 aa11.44□□□□□ -0.58
SNRPA1-216ENST00000626000 TAF9Q16594 264 aa11.44□□□□□ -0.58
SNRPA1-216ENST00000626000 TIMM50Q3ZCQ8 353 aa11.44□□□□□ -0.58
SNRPA1-216ENST00000626000 ATAD3CQ5T2N8 411 aa11.44□□□□□ -0.58
SNRPA1-216ENST00000626000 SYT6Q5T7P8 510 aaPredicted RBP11.44□□□□□ -0.58
SNRPA1-216ENST00000626000 MINOS1Q5TGZ0 78 aa11.44□□□□□ -0.58
SNRPA1-216ENST00000626000 SLC16A12Q6ZSM3 486 aa11.44□□□□□ -0.58
SNRPA1-216ENST00000626000 DTX3Q8N9I9 347 aa11.44□□□□□ -0.58
SNRPA1-216ENST00000626000 ZNF596Q8TC21 504 aa11.44□□□□□ -0.58
SNRPA1-216ENST00000626000 COQ2Q96H96 371 aa11.44□□□□□ -0.58
SNRPA1-216ENST00000626000 Q96M66 194 aa11.44□□□□□ -0.58
SNRPA1-216ENST00000626000 C1orf147Q96MC9 270 aaPredicted RBP11.44□□□□□ -0.58
SNRPA1-216ENST00000626000 ZNF48Q96MX3 618 aaPredicted RBP11.44□□□□□ -0.58
SNRPA1-216ENST00000626000 TMEM59Q9BXS4 323 aa11.44□□□□□ -0.58
SNRPA1-216ENST00000626000 SELENOIQ9C0D9 397 aa11.44□□□□□ -0.58
SNRPA1-216ENST00000626000 STUB1Q9UNE7 303 aa11.44□□□□□ -0.58
SNRPA1-216ENST00000626000 SSR3Q9UNL2 185 aa11.44□□□□□ -0.58
SNRPA1-216ENST00000626000 MINOS1-NBL1R4GNA1 71 aa11.44□□□□□ -0.58
SNRPA1-216ENST00000626000 V9GY05 133 aa11.44□□□□□ -0.58
SNRPA1-216ENST00000626000 A0A0U1RQK1 487 aa11.43□□□□□ -0.58
SNRPA1-216ENST00000626000 KBTBD11-OT1A0A1B0GTJ5 212 aa11.43□□□□□ -0.58
SNRPA1-216ENST00000626000 HSPB6O14558 160 aa11.43□□□□□ -0.58
SNRPA1-216ENST00000626000 CRYBA1P05813 215 aa11.43□□□□□ -0.58
SNRPA1-216ENST00000626000 MELTFP08582 738 aa11.43□□□□□ -0.58
SNRPA1-216ENST00000626000 ARSBP15848 533 aa11.43□□□□□ -0.58
SNRPA1-216ENST00000626000 CFPP27918 469 aa11.43□□□□□ -0.58
SNRPA1-216ENST00000626000 GLIPR1P48060 266 aa11.43□□□□□ -0.58
Retrieved 100 of 20,778 RNA–protein pairs in 33.1 ms