RNA–Protein interactions for RNA: ENST00000621897.1

BRCA1-229, Transcript of BRCA1, DNA repair associated, humanhuman

TSL 5

Gene BRCA1, Length 375 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA1-229ENST00000621897 TAPBPLQ9BX59 468 aa2.6□□□□□ -1.99
BRCA1-229ENST00000621897 SRXN1Q9BYN0 137 aa2.6□□□□□ -1.99
BRCA1-229ENST00000621897 SELENOIQ9C0D9 397 aa2.6□□□□□ -1.99
BRCA1-229ENST00000621897 DCSTAMPQ9H295 470 aa2.6□□□□□ -1.99
BRCA1-229ENST00000621897 POMKQ9H5K3 350 aa2.6□□□□□ -1.99
BRCA1-229ENST00000621897 METTL17Q9H7H0 456 aaPredicted RBP2.6□□□□□ -1.99
BRCA1-229ENST00000621897 TMEM138Q9NPI0 162 aa2.6□□□□□ -1.99
BRCA1-229ENST00000621897 KCNJ16Q9NPI9 418 aa2.6□□□□□ -1.99
BRCA1-229ENST00000621897 TAS2R5Q9NYW4 299 aa2.6□□□□□ -1.99
BRCA1-229ENST00000621897 CALYQ9NYX4 217 aa2.6□□□□□ -1.99
BRCA1-229ENST00000621897 DNAJC27Q9NZQ0 273 aa2.6□□□□□ -1.99
BRCA1-229ENST00000621897 GSKIPQ9P0R6 139 aa2.6□□□□□ -1.99
BRCA1-229ENST00000621897 OR1A1Q9P1Q5 309 aa2.6□□□□□ -1.99
BRCA1-229ENST00000621897 POLR1DQ9Y2S0 133 aa2.6□□□□□ -1.99
BRCA1-229ENST00000621897 PRELID3BQ9Y3B1 194 aa2.6□□□□□ -1.99
BRCA1-229ENST00000621897 KCNE3Q9Y6H6 103 aa2.6□□□□□ -1.99
BRCA1-229ENST00000621897 VWA8A3KMH1 1905 aa2.6□□□□□ -1.99
BRCA1-229ENST00000621897 PALLDQ8WX93 1383 aa2.6□□□□□ -1.99
BRCA1-229ENST00000621897 PHF3Q92576 2039 aaKnown RBP2.59□□□□□ -1.99
BRCA1-229ENST00000621897 TRAV8-4A0A0B4J246 113 aa2.59□□□□□ -1.99
BRCA1-229ENST00000621897 TRAV39A0A0B4J263 110 aa2.59□□□□□ -1.99
BRCA1-229ENST00000621897 A0A0B4J2A0 478 aa2.59□□□□□ -1.99
BRCA1-229ENST00000621897 IGSF23A1L1A6 192 aa2.59□□□□□ -1.99
BRCA1-229ENST00000621897 DHRS7CA6NNS2 312 aa2.59□□□□□ -1.99
BRCA1-229ENST00000621897 K7ENP7 123 aa2.59□□□□□ -1.99
BRCA1-229ENST00000621897 HCRTR1O43613 425 aa2.59□□□□□ -1.99
BRCA1-229ENST00000621897 CYB5R3P00387 301 aaPredicted RBP2.59□□□□□ -1.99
BRCA1-229ENST00000621897 MT-CO2P00403 227 aa2.59□□□□□ -1.99
BRCA1-229ENST00000621897 P01737 135 aa2.59□□□□□ -1.99
BRCA1-229ENST00000621897 SERPINA7P05543 415 aa2.59□□□□□ -1.99
BRCA1-229ENST00000621897 OR5G3P0C626 314 aa2.59□□□□□ -1.99
BRCA1-229ENST00000621897 OR10J4P0C629 311 aa2.59□□□□□ -1.99
BRCA1-229ENST00000621897 FAM228BP0C875 321 aa2.59□□□□□ -1.99
BRCA1-229ENST00000621897 RBMY1CP0DJD4 496 aa2.59□□□□□ -1.99
BRCA1-229ENST00000621897 OR13C7P0DN81 318 aa2.59□□□□□ -1.99
BRCA1-229ENST00000621897 ATF1P18846 271 aa2.59□□□□□ -1.99
BRCA1-229ENST00000621897 OGNP20774 298 aaKnown RBP2.59□□□□□ -1.99
BRCA1-229ENST00000621897 GABRR1P24046 479 aa2.59□□□□□ -1.99
BRCA1-229ENST00000621897 PAX6P26367 422 aa2.59□□□□□ -1.99
BRCA1-229ENST00000621897 SERPINB5P36952 375 aa2.59□□□□□ -1.99
BRCA1-229ENST00000621897 MYCNOSP40205 109 aa2.59□□□□□ -1.99
BRCA1-229ENST00000621897 OR1E2P47887 323 aa2.59□□□□□ -1.99
BRCA1-229ENST00000621897 RPL29P47914 159 aaKnown RBP2.59□□□□□ -1.99
BRCA1-229ENST00000621897 GCLMP48507 274 aa2.59□□□□□ -1.99
BRCA1-229ENST00000621897 APOC4P55056 127 aa2.59□□□□□ -1.99
BRCA1-229ENST00000621897 TAS2R43P59537 309 aa2.59□□□□□ -1.99
BRCA1-229ENST00000621897 PSG4Q00888 419 aa2.59□□□□□ -1.99
BRCA1-229ENST00000621897 IFITM2Q01629 132 aa2.59□□□□□ -1.99
BRCA1-229ENST00000621897 SNRNP35Q16560 246 aaKnown RBP2.59□□□□□ -1.99
BRCA1-229ENST00000621897 LRRC36Q1X8D7 754 aa2.59□□□□□ -1.99
BRCA1-229ENST00000621897 AVPI1Q5T686 147 aa2.59□□□□□ -1.99
BRCA1-229ENST00000621897 TEX36Q5VZQ5 186 aa2.59□□□□□ -1.99
BRCA1-229ENST00000621897 CYB5R2Q6BCY4 276 aa2.59□□□□□ -1.99
BRCA1-229ENST00000621897 ELP2Q6IA86 826 aa2.59□□□□□ -1.99
BRCA1-229ENST00000621897 TOMM20LQ6UXN7 152 aa2.59□□□□□ -1.99
BRCA1-229ENST00000621897 C3orf62Q6ZUJ4 267 aa2.59□□□□□ -1.99
BRCA1-229ENST00000621897 GRINAQ7Z429 371 aa2.59□□□□□ -1.99
BRCA1-229ENST00000621897 MRPL55Q7Z7F7 128 aaKnown RBP2.59□□□□□ -1.99
BRCA1-229ENST00000621897 RDH10Q8IZV5 341 aa2.59□□□□□ -1.99
BRCA1-229ENST00000621897 OR10G9Q8NGN4 311 aa2.59□□□□□ -1.99
BRCA1-229ENST00000621897 OR6N1Q8NGY5 312 aa2.59□□□□□ -1.99
BRCA1-229ENST00000621897 OR13G1Q8NGZ3 307 aa2.59□□□□□ -1.99
BRCA1-229ENST00000621897 OR13C6PQ8NH95 151 aa2.59□□□□□ -1.99
BRCA1-229ENST00000621897 DCUN1D4Q92564 292 aa2.59□□□□□ -1.99
BRCA1-229ENST00000621897 STARD4Q96DR4 205 aa2.59□□□□□ -1.99
BRCA1-229ENST00000621897 PYURFQ96I23 114 aa2.59□□□□□ -1.99
BRCA1-229ENST00000621897 FAM19A4Q96LR4 140 aa2.59□□□□□ -1.99
BRCA1-229ENST00000621897 BIRC8Q96P09 236 aa2.59□□□□□ -1.99
BRCA1-229ENST00000621897 PFDN5Q99471 154 aa2.59□□□□□ -1.99
BRCA1-229ENST00000621897 C2orf88Q9BSF0 95 aa2.59□□□□□ -1.99
BRCA1-229ENST00000621897 RIOK2Q9BVS4 552 aaKnown RBP2.59□□□□□ -1.99
BRCA1-229ENST00000621897 RPF2Q9H7B2 306 aaKnown RBP2.59□□□□□ -1.99
BRCA1-229ENST00000621897 TPT1P8Q9HAU6 139 aa2.59□□□□□ -1.99
BRCA1-229ENST00000621897 MARCH5Q9NX47 278 aa2.59□□□□□ -1.99
BRCA1-229ENST00000621897 DOK5Q9P104 306 aa2.59□□□□□ -1.99
BRCA1-229ENST00000621897 SHPKQ9UHJ6 478 aa2.59□□□□□ -1.99
BRCA1-229ENST00000621897 VAX2Q9UIW0 290 aa2.59□□□□□ -1.99
BRCA1-229ENST00000621897 C14orf166Q9Y224 244 aaKnown RBP2.59□□□□□ -1.99
BRCA1-229ENST00000621897 CARHSP1Q9Y2V2 147 aaKnown RBP2.59□□□□□ -1.99
BRCA1-229ENST00000621897 SBDSQ9Y3A5 250 aaKnown RBP eCLIP2.59□□□□□ -1.99
BRCA1-229ENST00000621897 FAM32AQ9Y421 112 aaKnown RBP2.59□□□□□ -1.99
BRCA1-229ENST00000621897 ASTN1O14525 1302 aa2.59□□□□□ -2
BRCA1-229ENST00000621897 YTHDC2Q9H6S0 1430 aaKnown RBP2.59□□□□□ -2
BRCA1-229ENST00000621897 KIF1BO60333 1816 aa2.58□□□□□ -2
BRCA1-229ENST00000621897 ARAP1Q96P48 1450 aa2.58□□□□□ -2
BRCA1-229ENST00000621897 PQLC2LA1A4F0 135 aa2.58□□□□□ -2
BRCA1-229ENST00000621897 K7EP13 123 aa2.58□□□□□ -2
BRCA1-229ENST00000621897 EIF1BO60739 113 aaKnown RBP2.58□□□□□ -2
BRCA1-229ENST00000621897 TBL1XO60907 577 aa2.58□□□□□ -2
BRCA1-229ENST00000621897 SULT1C4O75897 302 aa2.58□□□□□ -2
BRCA1-229ENST00000621897 AIFM1O95831 613 aa2.58□□□□□ -2
BRCA1-229ENST00000621897 IGKV1D-16P01601 117 aa2.58□□□□□ -2
BRCA1-229ENST00000621897 IL3P08700 152 aa2.58□□□□□ -2
BRCA1-229ENST00000621897 SULT1A3P0DMM9 295 aa2.58□□□□□ -2
BRCA1-229ENST00000621897 SULT1A4P0DMN0 295 aa2.58□□□□□ -2
BRCA1-229ENST00000621897 CD37P11049 281 aa2.58□□□□□ -2
BRCA1-229ENST00000621897 GGT1P19440 569 aa2.58□□□□□ -2
BRCA1-229ENST00000621897 TCN2P20062 427 aa2.58□□□□□ -2
BRCA1-229ENST00000621897 GZMHP20718 246 aa2.58□□□□□ -2
BRCA1-229ENST00000621897 MYL9P24844 172 aa2.58□□□□□ -2
Retrieved 100 of 20,778 RNA–protein pairs in 57.4 ms