RNA–Protein interactions for RNA: ENST00000620787.4

PDLIM3-212, Transcript of PDZ and LIM domain 3, humanhuman

TSL 4 BASIC

Gene PDLIM3, Length 2,352 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM3-212ENST00000620787 ZIC3O60481 467 aa16.86■□□□□ 0.29
PDLIM3-212ENST00000620787 KLK3P07288 261 aaPredicted RBP16.86■□□□□ 0.29
PDLIM3-212ENST00000620787 SOD3P08294 240 aa16.86■□□□□ 0.29
PDLIM3-212ENST00000620787 PATE4P0C8F1 98 aa16.86■□□□□ 0.29
PDLIM3-212ENST00000620787 ID3Q02535 119 aa16.86■□□□□ 0.29
PDLIM3-212ENST00000620787 BAXQ07812 192 aa16.86■□□□□ 0.29
PDLIM3-212ENST00000620787 AKR1C8PQ5T2L2 129 aa16.86■□□□□ 0.29
PDLIM3-212ENST00000620787 GFI1BQ5VTD9 330 aa16.86■□□□□ 0.29
PDLIM3-212ENST00000620787 ZNF818PQ6ZRF7 136 aa16.86■□□□□ 0.29
PDLIM3-212ENST00000620787 HIST3H2BBQ8N257 126 aa16.86■□□□□ 0.29
PDLIM3-212ENST00000620787 SRXN1Q9BYN0 137 aa16.86■□□□□ 0.29
PDLIM3-212ENST00000620787 PCED1AQ9H1Q7 454 aa16.86■□□□□ 0.29
PDLIM3-212ENST00000620787 DKKL1Q9UK85 242 aa16.86■□□□□ 0.29
PDLIM3-212ENST00000620787 CEP290O15078 2479 aa16.85■□□□□ 0.29
PDLIM3-212ENST00000620787 A0A0J9YW62 118 aa16.85■□□□□ 0.29
PDLIM3-212ENST00000620787 TNFSF11O14788 317 aa16.85■□□□□ 0.29
PDLIM3-212ENST00000620787 OR7C1O76099 320 aaPredicted RBP16.85■□□□□ 0.29
PDLIM3-212ENST00000620787 TRGC2P03986 189 aa16.85■□□□□ 0.29
PDLIM3-212ENST00000620787 LIFP15018 202 aa16.85■□□□□ 0.29
PDLIM3-212ENST00000620787 ZNF154Q13106 437 aa16.85■□□□□ 0.29
PDLIM3-212ENST00000620787 SPIN3Q5JUX0 258 aa16.85■□□□□ 0.29
PDLIM3-212ENST00000620787 BATF2Q8N1L9 274 aa16.85■□□□□ 0.29
PDLIM3-212ENST00000620787 IL22RA1Q8N6P7 574 aa16.85■□□□□ 0.29
PDLIM3-212ENST00000620787 CPNE4Q96A23 557 aaPredicted RBP16.85■□□□□ 0.29
PDLIM3-212ENST00000620787 PROK2Q9HC23 129 aa16.85■□□□□ 0.29
PDLIM3-212ENST00000620787 RARRES3Q9UL19 164 aa16.85■□□□□ 0.29
PDLIM3-212ENST00000620787 CNTRLQ7Z7A1 2325 aa16.85■□□□□ 0.29
PDLIM3-212ENST00000620787 MMP9P14780 707 aa16.85■□□□□ 0.29
PDLIM3-212ENST00000620787 ZNF32P17041 273 aa16.85■□□□□ 0.29
PDLIM3-212ENST00000620787 RPL23AP62750 156 aaKnown RBP16.85■□□□□ 0.29
PDLIM3-212ENST00000620787 ZNF92Q03936 586 aa16.85■□□□□ 0.29
PDLIM3-212ENST00000620787 KHDC3LQ587J8 217 aa16.85■□□□□ 0.29
PDLIM3-212ENST00000620787 PLCXD3Q63HM9 321 aa16.85■□□□□ 0.29
PDLIM3-212ENST00000620787 CALHM1Q8IU99 346 aa16.85■□□□□ 0.29
PDLIM3-212ENST00000620787 CMTM1Q8IZ96 169 aa16.85■□□□□ 0.29
PDLIM3-212ENST00000620787 OR13D1Q8NGV5 346 aa16.85■□□□□ 0.29
PDLIM3-212ENST00000620787 AKIRIN1Q9H9L7 192 aaPredicted RBP16.85■□□□□ 0.29
PDLIM3-212ENST00000620787 TMEM38BQ9NVV0 291 aa16.85■□□□□ 0.29
PDLIM3-212ENST00000620787 LOC102723971A0A1B0GUV8 181 aa16.84■□□□□ 0.29
PDLIM3-212ENST00000620787 ZNF587BE7ETH6 402 aa16.84■□□□□ 0.29
PDLIM3-212ENST00000620787 BCAT2O15382 392 aaPredicted RBP16.84■□□□□ 0.29
PDLIM3-212ENST00000620787 CCL3P10147 92 aa16.84■□□□□ 0.29
PDLIM3-212ENST00000620787 NTF4P34130 210 aa16.84■□□□□ 0.29
PDLIM3-212ENST00000620787 TLE4Q04727 773 aa16.84■□□□□ 0.29
PDLIM3-212ENST00000620787 RAB30Q15771 203 aa16.84■□□□□ 0.29
PDLIM3-212ENST00000620787 NAT6Q93015 286 aa16.84■□□□□ 0.29
PDLIM3-212ENST00000620787 GPR61Q9BZJ8 451 aa16.84■□□□□ 0.29
PDLIM3-212ENST00000620787 CRLF2Q9HC73 371 aa16.84■□□□□ 0.29
PDLIM3-212ENST00000620787 CCDC163A0A0D9SF12 145 aa16.84■□□□□ 0.29
PDLIM3-212ENST00000620787 HSFX4A0A1B0GTS1 333 aaPredicted RBP16.84■□□□□ 0.29
PDLIM3-212ENST00000620787 HSFX3A0A1B0GWH4 333 aaPredicted RBP16.84■□□□□ 0.29
PDLIM3-212ENST00000620787 G3V3Y1 287 aa16.84■□□□□ 0.29
PDLIM3-212ENST00000620787 SLC33A1O00400 549 aaPredicted RBP16.84■□□□□ 0.29
PDLIM3-212ENST00000620787 NXPH3O95157 252 aa16.84■□□□□ 0.29
PDLIM3-212ENST00000620787 HBE1P02100 147 aa16.84■□□□□ 0.29
PDLIM3-212ENST00000620787 NPBWR2P48146 333 aa16.84■□□□□ 0.29
PDLIM3-212ENST00000620787 DSCR4P56555 118 aaPredicted RBP16.84■□□□□ 0.29
PDLIM3-212ENST00000620787 HLA-DRB3P79483 266 aa16.84■□□□□ 0.29
PDLIM3-212ENST00000620787 DEFA6Q01524 100 aa16.84■□□□□ 0.29
PDLIM3-212ENST00000620787 DPPA3Q6W0C5 159 aa16.84■□□□□ 0.29
PDLIM3-212ENST00000620787 Q6ZS49 121 aa16.84■□□□□ 0.29
PDLIM3-212ENST00000620787 P4HA3Q7Z4N8 544 aa16.84■□□□□ 0.29
PDLIM3-212ENST00000620787 GAPTQ8N292 157 aa16.84■□□□□ 0.29
PDLIM3-212ENST00000620787 ATP5SQ99766 215 aa16.84■□□□□ 0.29
PDLIM3-212ENST00000620787 FAM86C1Q9NVL1 165 aa16.84■□□□□ 0.29
PDLIM3-212ENST00000620787 ELOA3CA0A087WX78 387 aaPredicted RBP16.83■□□□□ 0.28
PDLIM3-212ENST00000620787 MSANTD3-TMEFF1A0A0A6YYJ0 341 aa16.83■□□□□ 0.28
PDLIM3-212ENST00000620787 IGKV1D-13A0A0B4J2D9 117 aa16.83■□□□□ 0.28
PDLIM3-212ENST00000620787 DUXBA0A1W2PPF3 345 aa16.83■□□□□ 0.28
PDLIM3-212ENST00000620787 PPP1R2P9O14990 202 aa16.83■□□□□ 0.28
PDLIM3-212ENST00000620787 CHST1O43916 411 aa16.83■□□□□ 0.28
PDLIM3-212ENST00000620787 IGKV1-13P0DP09 117 aa16.83■□□□□ 0.28
PDLIM3-212ENST00000620787 HIST1H1BP16401 226 aaKnown RBP16.83■□□□□ 0.28
PDLIM3-212ENST00000620787 UCP1P25874 307 aa16.83■□□□□ 0.28
PDLIM3-212ENST00000620787 PAX9P55771 341 aa16.83■□□□□ 0.28
PDLIM3-212ENST00000620787 TAS2R30P59541 319 aa16.83■□□□□ 0.28
PDLIM3-212ENST00000620787 PCOLCEQ15113 449 aa16.83■□□□□ 0.28
PDLIM3-212ENST00000620787 WDR5BQ86VZ2 330 aa16.83■□□□□ 0.28
PDLIM3-212ENST00000620787 OR10G4Q8NGN3 311 aa16.83■□□□□ 0.28
PDLIM3-212ENST00000620787 PIGCQ92535 297 aa16.83■□□□□ 0.28
PDLIM3-212ENST00000620787 EXTL1Q92935 676 aa16.83■□□□□ 0.28
PDLIM3-212ENST00000620787 ZNF391Q9UJN7 358 aa16.83■□□□□ 0.28
PDLIM3-212ENST00000620787 LY86O95711 162 aa16.82■□□□□ 0.28
PDLIM3-212ENST00000620787 F10P00742 488 aa16.82■□□□□ 0.28
PDLIM3-212ENST00000620787 B4GALT1P15291 398 aa16.82■□□□□ 0.28
PDLIM3-212ENST00000620787 NKX6-1P78426 367 aaPredicted RBP16.82■□□□□ 0.28
PDLIM3-212ENST00000620787 PSG4Q00888 419 aa16.82■□□□□ 0.28
PDLIM3-212ENST00000620787 TRIM61Q5EBN2 209 aa16.82■□□□□ 0.28
PDLIM3-212ENST00000620787 ZNF611Q8N823 705 aa16.82■□□□□ 0.28
PDLIM3-212ENST00000620787 RNF115Q9Y4L5 304 aa16.82■□□□□ 0.28
PDLIM3-212ENST00000620787 VDAC1P21796 283 aa16.82■□□□□ 0.28
PDLIM3-212ENST00000620787 IL24Q13007 206 aa16.82■□□□□ 0.28
PDLIM3-212ENST00000620787 PDZD11Q5EBL8 140 aa16.82■□□□□ 0.28
PDLIM3-212ENST00000620787 ABHD5Q8WTS1 349 aa16.82■□□□□ 0.28
PDLIM3-212ENST00000620787 TRAV1-1A0A0B4J248 108 aa16.81■□□□□ 0.28
PDLIM3-212ENST00000620787 SLC22A20A6NK97 555 aa16.81■□□□□ 0.28
PDLIM3-212ENST00000620787 B4DEV8 164 aa16.81■□□□□ 0.28
PDLIM3-212ENST00000620787 TRGC1P0CF51 173 aa16.81■□□□□ 0.28
PDLIM3-212ENST00000620787 HERPUD1Q15011 391 aa16.81■□□□□ 0.28
PDLIM3-212ENST00000620787 FAM90A2PQ658T7 463 aa16.81■□□□□ 0.28
Retrieved 100 of 20,778 RNA–protein pairs in 28.2 ms