RNA–Protein interactions for RNA: ENST00000620675.4

NEK3-210, Transcript of NIMA related kinase 3, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene NEK3, Length 2,072 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEK3-210ENST00000620675 FAM234AQ9H0X4 552 aa11.24□□□□□ -0.61
NEK3-210ENST00000620675 ATG5Q9H1Y0 275 aa11.24□□□□□ -0.61
NEK3-210ENST00000620675 SPATA2Q9UM82 520 aa11.24□□□□□ -0.61
NEK3-210ENST00000620675 POLR3KQ9Y2Y1 108 aaPredicted RBP11.24□□□□□ -0.61
NEK3-210ENST00000620675 A0A075B6Q4 140 aa11.24□□□□□ -0.61
NEK3-210ENST00000620675 IGHV2-70DA0A0C4DH43 119 aa11.24□□□□□ -0.61
NEK3-210ENST00000620675 A6NHS1 94 aa11.24□□□□□ -0.61
NEK3-210ENST00000620675 CCL3L1P16619 93 aa11.24□□□□□ -0.61
NEK3-210ENST00000620675 RAB6AP20340 208 aa11.24□□□□□ -0.61
NEK3-210ENST00000620675 RPL31P62899 125 aaKnown RBP11.24□□□□□ -0.61
NEK3-210ENST00000620675 RSBN1Q5VWQ0 802 aaPredicted RBP11.24□□□□□ -0.61
NEK3-210ENST00000620675 TMEM200BQ69YZ2 307 aa11.24□□□□□ -0.61
NEK3-210ENST00000620675 C1orf229Q6ZS94 237 aaPredicted RBP11.24□□□□□ -0.61
NEK3-210ENST00000620675 IZUMO1Q8IYV9 350 aa11.24□□□□□ -0.61
NEK3-210ENST00000620675 CMTM4Q8IZR5 234 aa11.24□□□□□ -0.61
NEK3-210ENST00000620675 FAM185AQ8N0U4 392 aa11.24□□□□□ -0.61
NEK3-210ENST00000620675 NUDT16L1Q9BRJ7 211 aaKnown RBP11.24□□□□□ -0.61
NEK3-210ENST00000620675 URM1Q9BTM9 101 aaKnown RBP11.24□□□□□ -0.61
NEK3-210ENST00000620675 SLIRPQ9GZT3 109 aaKnown RBP11.24□□□□□ -0.61
NEK3-210ENST00000620675 ABRACLQ9P1F3 81 aa11.24□□□□□ -0.61
NEK3-210ENST00000620675 KIF25Q9UIL4 384 aa11.24□□□□□ -0.61
NEK3-210ENST00000620675 SMIM31A0A1B0GVY4 71 aa11.23□□□□□ -0.61
NEK3-210ENST00000620675 FAM90A10PA6NDY2 464 aa11.23□□□□□ -0.61
NEK3-210ENST00000620675 FAM90A18PA6NE21 464 aa11.23□□□□□ -0.61
NEK3-210ENST00000620675 FAM90A16PA6NEW6 464 aa11.23□□□□□ -0.61
NEK3-210ENST00000620675 FAM90A20PA6NIJ5 464 aa11.23□□□□□ -0.61
NEK3-210ENST00000620675 FAM90A8PA6NJQ4 464 aa11.23□□□□□ -0.61
NEK3-210ENST00000620675 FAM90A7PA6NKC0 464 aa11.23□□□□□ -0.61
NEK3-210ENST00000620675 FAM90A22PA8MWA6 464 aa11.23□□□□□ -0.61
NEK3-210ENST00000620675 FAM90A12PA8MX19 464 aa11.23□□□□□ -0.61
NEK3-210ENST00000620675 FAM90A5PA8MXJ8 464 aa11.23□□□□□ -0.61
NEK3-210ENST00000620675 FAM90A23PA8MXZ1 464 aa11.23□□□□□ -0.61
NEK3-210ENST00000620675 MGST3O14880 152 aa11.23□□□□□ -0.61
NEK3-210ENST00000620675 HPGDSO60760 199 aa11.23□□□□□ -0.61
NEK3-210ENST00000620675 EIF4EP06730 217 aaKnown RBP11.23□□□□□ -0.61
NEK3-210ENST00000620675 FAM90A15PP0C7V4 464 aa11.23□□□□□ -0.61
NEK3-210ENST00000620675 FAM90A13PP0C7W8 464 aa11.23□□□□□ -0.61
NEK3-210ENST00000620675 FAM90A14PP0C7W9 464 aa11.23□□□□□ -0.61
NEK3-210ENST00000620675 FAM90A24PP0C7X0 464 aa11.23□□□□□ -0.61
NEK3-210ENST00000620675 PTHLHP12272 177 aa11.23□□□□□ -0.61
NEK3-210ENST00000620675 GNB3P16520 340 aa11.23□□□□□ -0.61
NEK3-210ENST00000620675 KRBOX4Q5JUW0 171 aa11.23□□□□□ -0.61
NEK3-210ENST00000620675 CROCCP3Q8IVE0 287 aa11.23□□□□□ -0.61
NEK3-210ENST00000620675 LY6G5BQ8NDX9 201 aa11.23□□□□□ -0.61
NEK3-210ENST00000620675 NEK7Q8TDX7 302 aa11.23□□□□□ -0.61
NEK3-210ENST00000620675 RAB40AQ8WXH6 277 aa11.23□□□□□ -0.61
NEK3-210ENST00000620675 PECRQ9BY49 303 aa11.23□□□□□ -0.61
NEK3-210ENST00000620675 JMJD1CQ15652 2540 aa11.23□□□□□ -0.61
NEK3-210ENST00000620675 PPIAL4CA0A0B4J2A2 164 aa11.23□□□□□ -0.61
NEK3-210ENST00000620675 CTDSP2O14595 271 aa11.23□□□□□ -0.61
NEK3-210ENST00000620675 CD5LO43866 347 aa11.23□□□□□ -0.61
NEK3-210ENST00000620675 CSN2P05814 226 aa11.23□□□□□ -0.61
NEK3-210ENST00000620675 PPIAL4GP0DN37 164 aa11.23□□□□□ -0.61
NEK3-210ENST00000620675 P2RX3P56373 397 aa11.23□□□□□ -0.61
NEK3-210ENST00000620675 ARF6P62330 175 aa11.23□□□□□ -0.61
NEK3-210ENST00000620675 FAHD2BQ6P2I3 314 aaPredicted RBP11.23□□□□□ -0.61
NEK3-210ENST00000620675 OR10R2Q8NGX6 335 aa11.23□□□□□ -0.61
NEK3-210ENST00000620675 UBALD1Q8TB05 177 aa11.23□□□□□ -0.61
NEK3-210ENST00000620675 CCDC107Q8WV48 283 aa11.23□□□□□ -0.61
NEK3-210ENST00000620675 PTX4Q96A99 478 aa11.23□□□□□ -0.61
NEK3-210ENST00000620675 FAHD2AQ96GK7 314 aa11.23□□□□□ -0.61
NEK3-210ENST00000620675 TMPRSS13Q9BYE2 586 aa11.23□□□□□ -0.61
NEK3-210ENST00000620675 INSIG2Q9Y5U4 225 aa11.23□□□□□ -0.61
NEK3-210ENST00000620675 KIR2DS1A0A191URI9 304 aa11.22□□□□□ -0.61
NEK3-210ENST00000620675 ODAMA1E959 279 aa11.22□□□□□ -0.61
NEK3-210ENST00000620675 UTF1Q5T230 341 aa11.22□□□□□ -0.61
NEK3-210ENST00000620675 DCAF12L2Q5VW00 463 aa11.22□□□□□ -0.61
NEK3-210ENST00000620675 IL17RELQ6ZVW7 336 aa11.22□□□□□ -0.61
NEK3-210ENST00000620675 C11orf42Q8N5U0 333 aa11.22□□□□□ -0.61
NEK3-210ENST00000620675 OR5D13Q8NGL4 314 aa11.22□□□□□ -0.61
NEK3-210ENST00000620675 OR13A1Q8NGR1 328 aa11.22□□□□□ -0.61
NEK3-210ENST00000620675 C8orf46Q8TAG6 207 aa11.22□□□□□ -0.61
NEK3-210ENST00000620675 DGCR14Q96DF8 476 aaKnown RBP11.22□□□□□ -0.61
NEK3-210ENST00000620675 NEDD4LQ96PU5 975 aa11.22□□□□□ -0.61
NEK3-210ENST00000620675 MIXL1Q9H2W2 232 aa11.22□□□□□ -0.61
NEK3-210ENST00000620675 PLEKHJ1Q9NW61 149 aa11.22□□□□□ -0.61
NEK3-210ENST00000620675 ETAA1Q9NY74 926 aa11.22□□□□□ -0.61
NEK3-210ENST00000620675 AK3Q9UIJ7 227 aa11.22□□□□□ -0.61
NEK3-210ENST00000620675 ETV7Q9Y603 341 aa11.22□□□□□ -0.61
NEK3-210ENST00000620675 TRAV20A0A0B4J274 112 aa11.21□□□□□ -0.61
NEK3-210ENST00000620675 A0A1W2PQ09 198 aa11.21□□□□□ -0.61
NEK3-210ENST00000620675 MCRIP1C9JLW8 97 aa11.21□□□□□ -0.61
NEK3-210ENST00000620675 ZNF701M0R085 212 aaPredicted RBP11.21□□□□□ -0.61
NEK3-210ENST00000620675 MMP23AO75900 390 aa11.21□□□□□ -0.61
NEK3-210ENST00000620675 ELK1P19419 428 aa11.21□□□□□ -0.61
NEK3-210ENST00000620675 CDK2P24941 298 aa11.21□□□□□ -0.61
NEK3-210ENST00000620675 DVL1P1P54792 670 aaPredicted RBP11.21□□□□□ -0.61
NEK3-210ENST00000620675 CLEC9AQ6UXN8 241 aa11.21□□□□□ -0.61
NEK3-210ENST00000620675 BAIAP2L2Q6UXY1 529 aa11.21□□□□□ -0.61
NEK3-210ENST00000620675 Q6ZTK2 550 aa11.21□□□□□ -0.61
NEK3-210ENST00000620675 GLCCI1Q86VQ1 547 aa11.21□□□□□ -0.61
NEK3-210ENST00000620675 Q8N7P7 452 aa11.21□□□□□ -0.61
NEK3-210ENST00000620675 OR56B1Q8NGI3 324 aa11.21□□□□□ -0.61
NEK3-210ENST00000620675 OR4K15Q8NH41 348 aa11.21□□□□□ -0.61
NEK3-210ENST00000620675 KCTD12Q96CX2 325 aaKnown RBP11.21□□□□□ -0.61
NEK3-210ENST00000620675 MRI1Q9BV20 369 aa11.21□□□□□ -0.61
NEK3-210ENST00000620675 YAE1D1Q9NRH1 226 aa11.21□□□□□ -0.61
NEK3-210ENST00000620675 CCDC59Q9P031 241 aaKnown RBP11.21□□□□□ -0.61
NEK3-210ENST00000620675 ONECUT1Q9UBC0 465 aa11.21□□□□□ -0.61
NEK3-210ENST00000620675 OPN4Q9UHM6 478 aa11.21□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 67.1 ms