RNA–Protein interactions for RNA: ENST00000618500.4

SNCA-213, Transcript of synuclein alpha, humanhuman

TSL 1 (best) BASIC

Gene SNCA, Length 3,022 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Synapse .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNCA-213ENST00000618500 VSNL1P62760 191 aa3.49□□□□□ -1.85
SNCA-213ENST00000618500 DEFB136Q30KP8 78 aa3.49□□□□□ -1.85
SNCA-213ENST00000618500 C9orf152Q5JTZ5 239 aa3.49□□□□□ -1.85
SNCA-213ENST00000618500 IL34Q6ZMJ4 242 aa3.49□□□□□ -1.85
SNCA-213ENST00000618500 GTSCR1Q86UQ5 136 aa3.49□□□□□ -1.85
SNCA-213ENST00000618500 TMEM217Q8N7C4 229 aa3.49□□□□□ -1.85
SNCA-213ENST00000618500 DUX3Q96PT4 197 aa3.49□□□□□ -1.85
SNCA-213ENST00000618500 RASL11BQ9BPW5 248 aa3.49□□□□□ -1.85
SNCA-213ENST00000618500 PBOV1Q9GZY1 135 aa3.49□□□□□ -1.85
SNCA-213ENST00000618500 HMG20AQ9NP66 347 aa3.49□□□□□ -1.85
SNCA-213ENST00000618500 MTCH1Q9NZJ7 389 aa3.49□□□□□ -1.85
SNCA-213ENST00000618500 CEPT1Q9Y6K0 416 aa3.49□□□□□ -1.85
SNCA-213ENST00000618500 STAB2Q8WWQ8 2551 aa3.49□□□□□ -1.85
SNCA-213ENST00000618500 VPS13BQ7Z7G8 4022 aa3.49□□□□□ -1.85
SNCA-213ENST00000618500 HSD17B6O14756 317 aa3.49□□□□□ -1.85
SNCA-213ENST00000618500 GADD45GO95257 159 aa3.49□□□□□ -1.85
SNCA-213ENST00000618500 IGKV1D-33P01593 117 aa3.49□□□□□ -1.85
SNCA-213ENST00000618500 IGKV1-33P01594 117 aa3.49□□□□□ -1.85
SNCA-213ENST00000618500 RPSAP08865 295 aaKnown RBP3.49□□□□□ -1.85
SNCA-213ENST00000618500 ALOX5APP20292 161 aa3.49□□□□□ -1.85
SNCA-213ENST00000618500 ZP3P21754 424 aa3.49□□□□□ -1.85
SNCA-213ENST00000618500 RAB9AP51151 201 aa3.49□□□□□ -1.85
SNCA-213ENST00000618500 ZNF660Q6AZW8 331 aaPredicted RBP3.49□□□□□ -1.85
SNCA-213ENST00000618500 ELMOD2Q8IZ81 293 aa3.49□□□□□ -1.85
SNCA-213ENST00000618500 C17orf53Q8N3J3 647 aaPredicted RBP3.49□□□□□ -1.85
SNCA-213ENST00000618500 ASCC1Q8N9N2 400 aaKnown RBP3.49□□□□□ -1.85
SNCA-213ENST00000618500 OR2T33Q8NG76 320 aa3.49□□□□□ -1.85
SNCA-213ENST00000618500 OR52N4Q8NGI2 321 aa3.49□□□□□ -1.85
SNCA-213ENST00000618500 OSBPL10Q9BXB5 764 aa3.49□□□□□ -1.85
SNCA-213ENST00000618500 CHST5Q9GZS9 411 aa3.49□□□□□ -1.85
SNCA-213ENST00000618500 SLA2Q9H6Q3 261 aa3.49□□□□□ -1.85
SNCA-213ENST00000618500 RAB9BQ9NP90 201 aa3.49□□□□□ -1.85
SNCA-213ENST00000618500 EXOSC4Q9NPD3 245 aaKnown RBP3.49□□□□□ -1.85
SNCA-213ENST00000618500 CMTM6Q9NX76 183 aa3.49□□□□□ -1.85
SNCA-213ENST00000618500 RAB21Q9UL25 225 aa3.49□□□□□ -1.85
SNCA-213ENST00000618500 PIGLQ9Y2B2 252 aa3.49□□□□□ -1.85
SNCA-213ENST00000618500 SNX13Q9Y5W8 968 aa3.49□□□□□ -1.85
SNCA-213ENST00000618500 TMEM14AQ9Y6G1 99 aa3.49□□□□□ -1.85
SNCA-213ENST00000618500 A0A1B0GTI1 187 aa3.49□□□□□ -1.85
SNCA-213ENST00000618500 RIIAD1A6NNX1 92 aa3.49□□□□□ -1.85
SNCA-213ENST00000618500 SH2D1BO14796 132 aa3.49□□□□□ -1.85
SNCA-213ENST00000618500 CDK2P24941 298 aa3.49□□□□□ -1.85
SNCA-213ENST00000618500 KLF5Q13887 457 aaPredicted RBP3.49□□□□□ -1.85
SNCA-213ENST00000618500 CRMP1Q14194 572 aa3.49□□□□□ -1.85
SNCA-213ENST00000618500 CEP78Q5JTW2 689 aa3.49□□□□□ -1.85
SNCA-213ENST00000618500 SAMD4BQ5PRF9 694 aaKnown RBP3.49□□□□□ -1.85
SNCA-213ENST00000618500 Q6P435 159 aa3.49□□□□□ -1.85
SNCA-213ENST00000618500 KRT77Q7Z794 578 aa3.49□□□□□ -1.85
SNCA-213ENST00000618500 HIST2H2ABQ8IUE6 130 aaPredicted RBP3.49□□□□□ -1.85
SNCA-213ENST00000618500 OR8D4Q8NGM9 314 aa3.49□□□□□ -1.85
SNCA-213ENST00000618500 OR56B4Q8NH76 319 aa3.49□□□□□ -1.85
SNCA-213ENST00000618500 PP6455Q8WZ26 134 aa3.49□□□□□ -1.85
SNCA-213ENST00000618500 OR4C12Q96R67 309 aa3.49□□□□□ -1.85
SNCA-213ENST00000618500 AMELYQ99218 206 aa3.49□□□□□ -1.85
SNCA-213ENST00000618500 ST6GALNAC5Q9BVH7 336 aa3.49□□□□□ -1.85
SNCA-213ENST00000618500 SLC25A19Q9HC21 320 aa3.49□□□□□ -1.85
SNCA-213ENST00000618500 ZNF107Q9UII5 783 aaPredicted RBP3.49□□□□□ -1.85
SNCA-213ENST00000618500 SH2D7A6NKC9 451 aaPredicted RBP3.48□□□□□ -1.85
SNCA-213ENST00000618500 UBE2CO00762 179 aa3.48□□□□□ -1.85
SNCA-213ENST00000618500 MAGEB3O15480 346 aa3.48□□□□□ -1.85
SNCA-213ENST00000618500 CDK2AP2O75956 126 aa3.48□□□□□ -1.85
SNCA-213ENST00000618500 LY6G6CO95867 125 aa3.48□□□□□ -1.85
SNCA-213ENST00000618500 TTRP02766 147 aa3.48□□□□□ -1.85
SNCA-213ENST00000618500 SOX6P35712 828 aa3.48□□□□□ -1.85
SNCA-213ENST00000618500 IL13RA2Q14627 380 aa3.48□□□□□ -1.85
SNCA-213ENST00000618500 ELP2Q6IA86 826 aa3.48□□□□□ -1.85
SNCA-213ENST00000618500 LINC00596Q86U02 117 aa3.48□□□□□ -1.85
SNCA-213ENST00000618500 ZNF679Q8IYX0 411 aa3.48□□□□□ -1.85
SNCA-213ENST00000618500 FAM58AQ8N1B3 248 aa3.48□□□□□ -1.85
SNCA-213ENST00000618500 ANKRD42Q8N9B4 389 aa3.48□□□□□ -1.85
SNCA-213ENST00000618500 OR6N2Q8NGY6 317 aa3.48□□□□□ -1.85
SNCA-213ENST00000618500 BCAS4Q8TDM0 211 aa3.48□□□□□ -1.85
SNCA-213ENST00000618500 RTN4IP1Q8WWV3 396 aaPredicted RBP3.48□□□□□ -1.85
SNCA-213ENST00000618500 EMG1Q92979 244 aaKnown RBP3.48□□□□□ -1.85
SNCA-213ENST00000618500 SPSB1Q96BD6 273 aa3.48□□□□□ -1.85
SNCA-213ENST00000618500 COQ2Q96H96 371 aa3.48□□□□□ -1.85
SNCA-213ENST00000618500 ZNF488Q96MN9 340 aa3.48□□□□□ -1.85
SNCA-213ENST00000618500 PAIP2Q9BPZ3 127 aaKnown RBP3.48□□□□□ -1.85
SNCA-213ENST00000618500 HSPB9Q9BQS6 159 aa3.48□□□□□ -1.85
SNCA-213ENST00000618500 ZCCHC4Q9H5U6 513 aa3.48□□□□□ -1.85
SNCA-213ENST00000618500 TMBIM4Q9HC24 238 aa3.48□□□□□ -1.85
SNCA-213ENST00000618500 GPR84Q9NQS5 396 aa3.48□□□□□ -1.85
SNCA-213ENST00000618500 CALYQ9NYX4 217 aa3.48□□□□□ -1.85
SNCA-213ENST00000618500 FOXA2Q9Y261 457 aaPredicted RBP3.48□□□□□ -1.85
SNCA-213ENST00000618500 SNX5Q9Y5X3 404 aa3.48□□□□□ -1.85
SNCA-213ENST00000618500 R4GMQ9 66 aa3.48□□□□□ -1.85
SNCA-213ENST00000618500 TRAV41A0A0B4J266 112 aa3.48□□□□□ -1.85
SNCA-213ENST00000618500 SLC33A1O00400 549 aaPredicted RBP3.48□□□□□ -1.85
SNCA-213ENST00000618500 OR2A4O95047 310 aa3.48□□□□□ -1.85
SNCA-213ENST00000618500 DBTP11182 482 aaKnown RBP3.48□□□□□ -1.85
SNCA-213ENST00000618500 PRKACBP22694 351 aa3.48□□□□□ -1.85
SNCA-213ENST00000618500 MAGEA2P43356 314 aa3.48□□□□□ -1.85
SNCA-213ENST00000618500 ID3Q02535 119 aa3.48□□□□□ -1.85
SNCA-213ENST00000618500 LIPEQ05469 1076 aa3.48□□□□□ -1.85
SNCA-213ENST00000618500 NHLRC3Q5JS37 347 aa3.48□□□□□ -1.85
SNCA-213ENST00000618500 FAHD1Q6P587 224 aa3.48□□□□□ -1.85
SNCA-213ENST00000618500 ANKRD13BQ86YJ7 626 aa3.48□□□□□ -1.85
SNCA-213ENST00000618500 PRR18Q8N4B5 295 aa3.48□□□□□ -1.85
SNCA-213ENST00000618500 ZNF439Q8NDP4 499 aa3.48□□□□□ -1.85
SNCA-213ENST00000618500 OR51T1Q8NGJ9 327 aa3.48□□□□□ -1.85
Retrieved 100 of 20,778 RNA–protein pairs in 45.1 ms