RNA–Protein interactions for RNA: ENST00000614659.1

SNPH-203, Transcript of syntaphilin, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene SNPH, Length 5,354 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNPH-203ENST00000614659 HRASP01112 189 aa12.91□□□□□ -0.34
SNPH-203ENST00000614659 CEACAM6P40199 344 aa12.91□□□□□ -0.34
SNPH-203ENST00000614659 C1orf100Q5SVJ3 147 aa12.91□□□□□ -0.34
SNPH-203ENST00000614659 ZNF66Q6ZN08 573 aa12.91□□□□□ -0.34
SNPH-203ENST00000614659 C19orf35Q6ZS72 473 aa12.91□□□□□ -0.34
SNPH-203ENST00000614659 ZNF596Q8TC21 504 aa12.91□□□□□ -0.34
SNPH-203ENST00000614659 TNFSF18Q9UNG2 199 aa12.91□□□□□ -0.34
SNPH-203ENST00000614659 UBE2L5PA0A1B0GUS4 154 aa12.91□□□□□ -0.34
SNPH-203ENST00000614659 NPIPB13A6NJU9 1138 aa12.91□□□□□ -0.34
SNPH-203ENST00000614659 NPIPB4C9JG80 1138 aa12.91□□□□□ -0.34
SNPH-203ENST00000614659 CLDN34H7C241 214 aa12.91□□□□□ -0.34
SNPH-203ENST00000614659 HIST1H3AP68431 136 aa12.91□□□□□ -0.34
SNPH-203ENST00000614659 OR2B11Q5JQS5 317 aa12.91□□□□□ -0.34
SNPH-203ENST00000614659 ZPLD1Q8TCW7 415 aa12.91□□□□□ -0.34
SNPH-203ENST00000614659 IFNL4K9M1U5 179 aa12.91□□□□□ -0.34
SNPH-203ENST00000614659 PNRC1Q12796 327 aaPredicted RBP12.91□□□□□ -0.34
SNPH-203ENST00000614659 C19orf48Q6RUI8 117 aa12.91□□□□□ -0.34
SNPH-203ENST00000614659 DPPA3Q6W0C5 159 aa12.91□□□□□ -0.34
SNPH-203ENST00000614659 ZBTB34Q8NCN2 500 aa12.91□□□□□ -0.34
SNPH-203ENST00000614659 CA10Q9NS85 328 aa12.91□□□□□ -0.34
SNPH-203ENST00000614659 ZNF638Q14966 1978 aaKnown RBP12.91□□□□□ -0.34
SNPH-203ENST00000614659 SMIM6P0DI80 62 aa12.9□□□□□ -0.34
SNPH-203ENST00000614659 TMEM33P57088 247 aa12.9□□□□□ -0.34
SNPH-203ENST00000614659 C16orf47Q6ZP98 133 aaPredicted RBP12.9□□□□□ -0.34
SNPH-203ENST00000614659 OR5C1Q8NGR4 320 aa12.9□□□□□ -0.34
SNPH-203ENST00000614659 KCNK15Q9H427 330 aa12.9□□□□□ -0.34
SNPH-203ENST00000614659 FKBP11Q9NYL4 201 aa12.9□□□□□ -0.34
SNPH-203ENST00000614659 WSB1Q9Y6I7 421 aa12.9□□□□□ -0.34
SNPH-203ENST00000614659 ELOA3CA0A087WX78 387 aaPredicted RBP12.9□□□□□ -0.34
SNPH-203ENST00000614659 TMEM218A2RU14 115 aa12.9□□□□□ -0.34
SNPH-203ENST00000614659 KLF4O43474 513 aa12.9□□□□□ -0.34
SNPH-203ENST00000614659 CST7O76096 145 aa12.9□□□□□ -0.34
SNPH-203ENST00000614659 CCL3P10147 92 aa12.9□□□□□ -0.34
SNPH-203ENST00000614659 CSN1S1P47710 185 aa12.9□□□□□ -0.34
SNPH-203ENST00000614659 ZNF468Q5VIY5 522 aaPredicted RBP12.9□□□□□ -0.34
SNPH-203ENST00000614659 GPR35Q9HC97 309 aa12.9□□□□□ -0.34
SNPH-203ENST00000614659 PARP11Q9NR21 331 aa12.9□□□□□ -0.34
SNPH-203ENST00000614659 AP4M1O00189 453 aa12.9□□□□□ -0.34
SNPH-203ENST00000614659 LPAR6P43657 344 aa12.9□□□□□ -0.34
SNPH-203ENST00000614659 ZNF816Q0VGE8 651 aaPredicted RBP12.9□□□□□ -0.34
SNPH-203ENST00000614659 SLC16A13Q7RTY0 426 aa12.9□□□□□ -0.34
SNPH-203ENST00000614659 OR10AC1Q8NH08 325 aa12.9□□□□□ -0.34
SNPH-203ENST00000614659 ADTRPQ96IZ2 230 aa12.9□□□□□ -0.34
SNPH-203ENST00000614659 ATP5SQ99766 215 aa12.9□□□□□ -0.34
SNPH-203ENST00000614659 TMEM147Q9BVK8 224 aa12.9□□□□□ -0.34
SNPH-203ENST00000614659 LPAR3Q9UBY5 353 aa12.9□□□□□ -0.34
SNPH-203ENST00000614659 LCTP09848 1927 aa12.9□□□□□ -0.34
SNPH-203ENST00000614659 SLC31A2O15432 143 aa12.9□□□□□ -0.34
SNPH-203ENST00000614659 TTRP02766 147 aa12.9□□□□□ -0.34
SNPH-203ENST00000614659 FGF2P09038 288 aa12.9□□□□□ -0.34
SNPH-203ENST00000614659 FCER1GP30273 86 aa12.9□□□□□ -0.34
SNPH-203ENST00000614659 FAM24BQ8N5W8 94 aa12.9□□□□□ -0.34
SNPH-203ENST00000614659 GPR37O15354 613 aa12.89□□□□□ -0.35
SNPH-203ENST00000614659 CA6P23280 308 aa12.89□□□□□ -0.35
SNPH-203ENST00000614659 CD200P41217 278 aa12.89□□□□□ -0.35
SNPH-203ENST00000614659 MESP2Q0VG99 397 aa12.89□□□□□ -0.35
SNPH-203ENST00000614659 TMEM183BQ1AE95 376 aa12.89□□□□□ -0.35
SNPH-203ENST00000614659 C4orf51C9J302 202 aa12.89□□□□□ -0.35
SNPH-203ENST00000614659 ONECUT2O95948 504 aa12.89□□□□□ -0.35
SNPH-203ENST00000614659 HOXB1P14653 301 aaPredicted RBP12.89□□□□□ -0.35
SNPH-203ENST00000614659 FBXW9Q5XUX1 488 aa12.89□□□□□ -0.35
SNPH-203ENST00000614659 ZNRF4Q8WWF5 429 aa12.89□□□□□ -0.35
SNPH-203ENST00000614659 KLK13Q9UKR3 277 aa12.89□□□□□ -0.35
SNPH-203ENST00000614659 IGLV1-36A0A0B4J1U3 117 aa12.89□□□□□ -0.35
SNPH-203ENST00000614659 UPK3AO75631 287 aa12.89□□□□□ -0.35
SNPH-203ENST00000614659 GALR1P47211 349 aa12.89□□□□□ -0.35
SNPH-203ENST00000614659 TMEM105Q8N8V8 129 aa12.89□□□□□ -0.35
SNPH-203ENST00000614659 PRO1933Q9H354 126 aa12.89□□□□□ -0.35
SNPH-203ENST00000614659 ZSWIM8A7E2V4 1837 aa12.89□□□□□ -0.35
SNPH-203ENST00000614659 DICER1Q9UPY3 1922 aaKnown RBP12.89□□□□□ -0.35
SNPH-203ENST00000614659 TMEM210A6NLX4 147 aa12.89□□□□□ -0.35
SNPH-203ENST00000614659 NKX2-8O15522 239 aa12.89□□□□□ -0.35
SNPH-203ENST00000614659 VDAC1P21796 283 aa12.89□□□□□ -0.35
SNPH-203ENST00000614659 SPATA46Q5T0L3 261 aa12.89□□□□□ -0.35
SNPH-203ENST00000614659 OR5A2Q8NGI9 324 aa12.89□□□□□ -0.35
SNPH-203ENST00000614659 ANGPTL4Q9BY76 406 aa12.89□□□□□ -0.35
SNPH-203ENST00000614659 XKRY2A2RUG3 117 aa12.89□□□□□ -0.35
SNPH-203ENST00000614659 BRS3P32247 399 aa12.89□□□□□ -0.35
SNPH-203ENST00000614659 WNT2BQ93097 391 aa12.89□□□□□ -0.35
SNPH-203ENST00000614659 SMDT1Q9H4I9 107 aa12.89□□□□□ -0.35
SNPH-203ENST00000614659 MMP24Q9Y5R2 645 aa12.89□□□□□ -0.35
SNPH-203ENST00000614659 B4DEV8 164 aa12.88□□□□□ -0.35
SNPH-203ENST00000614659 RPL36A-HNRNPH2H7BZ11 118 aa12.88□□□□□ -0.35
SNPH-203ENST00000614659 OR7C2O60412 319 aa12.88□□□□□ -0.35
SNPH-203ENST00000614659 PTTG1IPP53801 180 aa12.88□□□□□ -0.35
SNPH-203ENST00000614659 GNB1P62873 340 aa12.88□□□□□ -0.35
SNPH-203ENST00000614659 PMP22Q01453 160 aa12.88□□□□□ -0.35
SNPH-203ENST00000614659 FAM27BQ5VT28 67 aa12.88□□□□□ -0.35
SNPH-203ENST00000614659 TBC1D26Q86UD7 250 aa12.88□□□□□ -0.35
SNPH-203ENST00000614659 NHLRC2Q8NBF2 726 aa12.88□□□□□ -0.35
SNPH-203ENST00000614659 ADIPOR1Q96A54 375 aa12.88□□□□□ -0.35
SNPH-203ENST00000614659 ADAT3Q96EY9 351 aaPredicted RBP12.88□□□□□ -0.35
SNPH-203ENST00000614659 KCNK17Q96T54 332 aa12.88□□□□□ -0.35
SNPH-203ENST00000614659 MANBALQ9NQG1 85 aa12.88□□□□□ -0.35
SNPH-203ENST00000614659 PTBP3O95758 552 aaKnown RBP12.88□□□□□ -0.35
SNPH-203ENST00000614659 EFNB2P52799 333 aa12.88□□□□□ -0.35
SNPH-203ENST00000614659 MGAT2Q10469 447 aa12.88□□□□□ -0.35
SNPH-203ENST00000614659 GINS3Q9BRX5 216 aa12.88□□□□□ -0.35
SNPH-203ENST00000614659 VSIG4Q9Y279 399 aa12.88□□□□□ -0.35
SNPH-203ENST00000614659 TUSC5Q8IXB3 177 aa12.88□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 63.4 ms