RNA–Protein interactions for RNA: ENST00000612467.1

PCDHGA3-202, Transcript of protocadherin gamma subfamily A, 3, humanhuman

TSL 2

Gene PCDHGA3, Length 2,712 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGA3-202ENST00000612467 SMCO1Q147U7 214 aa12.03□□□□□ -0.48
PCDHGA3-202ENST00000612467 IZUMO4Q1ZYL8 232 aa12.03□□□□□ -0.48
PCDHGA3-202ENST00000612467 FBXW12Q6X9E4 464 aa12.03□□□□□ -0.48
PCDHGA3-202ENST00000612467 TBC1D26Q86UD7 250 aa12.03□□□□□ -0.48
PCDHGA3-202ENST00000612467 WDYHV1Q96HA8 205 aa12.03□□□□□ -0.48
PCDHGA3-202ENST00000612467 DNAJB11Q9UBS4 358 aa12.03□□□□□ -0.48
PCDHGA3-202ENST00000612467 RCL1Q9Y2P8 373 aaKnown RBP12.03□□□□□ -0.48
PCDHGA3-202ENST00000612467 RIF1Q5UIP0 2472 aaKnown RBP12.03□□□□□ -0.48
PCDHGA3-202ENST00000612467 CEP250Q9BV73 2442 aa12.03□□□□□ -0.48
PCDHGA3-202ENST00000612467 MEX3AA1L020 520 aaKnown RBP12.03□□□□□ -0.48
PCDHGA3-202ENST00000612467 TRAPPC2LH3BP13 241 aa12.03□□□□□ -0.48
PCDHGA3-202ENST00000612467 OR8U9P0C7N5 309 aa12.03□□□□□ -0.48
PCDHGA3-202ENST00000612467 OMGP23515 440 aa12.03□□□□□ -0.48
PCDHGA3-202ENST00000612467 TMEM211Q6ICI0 200 aa12.03□□□□□ -0.48
PCDHGA3-202ENST00000612467 OR8U1Q8NH10 309 aa12.03□□□□□ -0.48
PCDHGA3-202ENST00000612467 GALNT14Q96FL9 552 aa12.03□□□□□ -0.48
PCDHGA3-202ENST00000612467 RHOFQ9HBH0 211 aa12.03□□□□□ -0.48
PCDHGA3-202ENST00000612467 Q9N2K0 584 aa12.03□□□□□ -0.48
PCDHGA3-202ENST00000612467 C3orf85A0A1B0GTC6 90 aa12.02□□□□□ -0.48
PCDHGA3-202ENST00000612467 LYZL6O75951 148 aa12.02□□□□□ -0.48
PCDHGA3-202ENST00000612467 TFF1P04155 84 aa12.02□□□□□ -0.48
PCDHGA3-202ENST00000612467 NFYBP25208 207 aa12.02□□□□□ -0.48
PCDHGA3-202ENST00000612467 ECI1P42126 302 aa12.02□□□□□ -0.48
PCDHGA3-202ENST00000612467 NPBWR1P48145 328 aa12.02□□□□□ -0.48
PCDHGA3-202ENST00000612467 PLP2Q04941 152 aa12.02□□□□□ -0.48
PCDHGA3-202ENST00000612467 AKIRIN2Q53H80 203 aa12.02□□□□□ -0.48
PCDHGA3-202ENST00000612467 ZNF766Q5HY98 468 aa12.02□□□□□ -0.48
PCDHGA3-202ENST00000612467 ETV3LQ6ZN32 361 aa12.02□□□□□ -0.48
PCDHGA3-202ENST00000612467 Q6ZRG5 221 aa12.02□□□□□ -0.48
PCDHGA3-202ENST00000612467 SUMF2Q8NBJ7 301 aa12.02□□□□□ -0.48
PCDHGA3-202ENST00000612467 HSD17B11Q8NBQ5 300 aa12.02□□□□□ -0.48
PCDHGA3-202ENST00000612467 ESRP2Q9H6T0 727 aaKnown RBP12.02□□□□□ -0.48
PCDHGA3-202ENST00000612467 GVINP1Q7Z2Y8 2422 aa12.02□□□□□ -0.48
PCDHGA3-202ENST00000612467 LINC01387J3KSC0 135 aa12.02□□□□□ -0.49
PCDHGA3-202ENST00000612467 MPPED1O15442 326 aa12.02□□□□□ -0.49
PCDHGA3-202ENST00000612467 WT1P19544 449 aaPredicted RBP12.02□□□□□ -0.49
PCDHGA3-202ENST00000612467 POLR2GP62487 172 aaKnown RBP eCLIP12.02□□□□□ -0.49
PCDHGA3-202ENST00000612467 DMBX1Q8NFW5 382 aa12.02□□□□□ -0.49
PCDHGA3-202ENST00000612467 IL1F10Q8WWZ1 152 aa12.02□□□□□ -0.49
PCDHGA3-202ENST00000612467 RSRP1Q9BUV0 290 aa12.02□□□□□ -0.49
PCDHGA3-202ENST00000612467 KLF13Q9Y2Y9 288 aaPredicted RBP12.02□□□□□ -0.49
PCDHGA3-202ENST00000612467 AKAP13Q12802 2813 aa12.02□□□□□ -0.49
PCDHGA3-202ENST00000612467 TRGV5A0A0B4J1U4 118 aa12.02□□□□□ -0.49
PCDHGA3-202ENST00000612467 SPAARA0A1B0GVQ0 90 aa12.02□□□□□ -0.49
PCDHGA3-202ENST00000612467 FAM24AA6NFZ4 105 aa12.02□□□□□ -0.49
PCDHGA3-202ENST00000612467 SLC22A20A6NK97 555 aa12.02□□□□□ -0.49
PCDHGA3-202ENST00000612467 ZNF724A8MTY0 619 aa12.02□□□□□ -0.49
PCDHGA3-202ENST00000612467 KLRC4-KLRK1H3BQV0 150 aa12.02□□□□□ -0.49
PCDHGA3-202ENST00000612467 H7C1Q1 480 aa12.02□□□□□ -0.49
PCDHGA3-202ENST00000612467 SS18L1O75177 396 aaPredicted RBP12.02□□□□□ -0.49
PCDHGA3-202ENST00000612467 NAPSAO96009 420 aa12.02□□□□□ -0.49
PCDHGA3-202ENST00000612467 APLNRP35414 380 aa12.02□□□□□ -0.49
PCDHGA3-202ENST00000612467 IDH3GP51553 393 aaPredicted RBP12.02□□□□□ -0.49
PCDHGA3-202ENST00000612467 CCL11P51671 97 aa12.02□□□□□ -0.49
PCDHGA3-202ENST00000612467 WDR86Q86TI4 376 aa12.02□□□□□ -0.49
PCDHGA3-202ENST00000612467 ZFP62Q8NB50 900 aaPredicted RBP12.02□□□□□ -0.49
PCDHGA3-202ENST00000612467 OR1K1Q8NGR3 316 aa12.02□□□□□ -0.49
PCDHGA3-202ENST00000612467 OR5P3Q8WZ94 311 aa12.02□□□□□ -0.49
PCDHGA3-202ENST00000612467 TMEM9BQ9NQ34 198 aa12.02□□□□□ -0.49
PCDHGA3-202ENST00000612467 TRAV24A0A0B4J272 114 aa12.01□□□□□ -0.49
PCDHGA3-202ENST00000612467 RAB19A4D1S5 217 aa12.01□□□□□ -0.49
PCDHGA3-202ENST00000612467 CD80P33681 288 aa12.01□□□□□ -0.49
PCDHGA3-202ENST00000612467 PJVKQ0ZLH3 352 aa12.01□□□□□ -0.49
PCDHGA3-202ENST00000612467 CLINT1Q14677 625 aa12.01□□□□□ -0.49
PCDHGA3-202ENST00000612467 NRN1LQ496H8 165 aa12.01□□□□□ -0.49
PCDHGA3-202ENST00000612467 CXorf66Q5JRM2 361 aaPredicted RBP12.01□□□□□ -0.49
PCDHGA3-202ENST00000612467 SHEQ5VZ18 495 aa12.01□□□□□ -0.49
PCDHGA3-202ENST00000612467 FAM53AQ6NSI3 398 aaPredicted RBP12.01□□□□□ -0.49
PCDHGA3-202ENST00000612467 MKXQ8IYA7 352 aa12.01□□□□□ -0.49
PCDHGA3-202ENST00000612467 HIST1H2AAQ96QV6 131 aa12.01□□□□□ -0.49
PCDHGA3-202ENST00000612467 MMP26Q9NRE1 261 aa12.01□□□□□ -0.49
PCDHGA3-202ENST00000612467 UQCC1Q9NVA1 299 aa12.01□□□□□ -0.49
PCDHGA3-202ENST00000612467 UBE2J1Q9Y385 318 aaPredicted RBP12.01□□□□□ -0.49
PCDHGA3-202ENST00000612467 CST4P01036 141 aa12.01□□□□□ -0.49
PCDHGA3-202ENST00000612467 CD46P15529 392 aa12.01□□□□□ -0.49
PCDHGA3-202ENST00000612467 AKR1C3P42330 323 aa12.01□□□□□ -0.49
PCDHGA3-202ENST00000612467 CEBPDP49716 269 aaPredicted RBP12.01□□□□□ -0.49
PCDHGA3-202ENST00000612467 DPPA2Q7Z7J5 298 aa12.01□□□□□ -0.49
PCDHGA3-202ENST00000612467 CCDC36Q8IYA8 594 aa12.01□□□□□ -0.49
PCDHGA3-202ENST00000612467 LGI3Q8N145 548 aa12.01□□□□□ -0.49
PCDHGA3-202ENST00000612467 SMIM8Q96KF7 97 aa12.01□□□□□ -0.49
PCDHGA3-202ENST00000612467 OR2J1Q9GZK6 312 aa12.01□□□□□ -0.49
PCDHGA3-202ENST00000612467 SIRPB1O00241 398 aa12□□□□□ -0.49
PCDHGA3-202ENST00000612467 ZNF44P15621 663 aa12□□□□□ -0.49
PCDHGA3-202ENST00000612467 TRIP6Q15654 476 aaKnown RBP12□□□□□ -0.49
PCDHGA3-202ENST00000612467 CXorf67Q86X51 503 aaPredicted RBP12□□□□□ -0.49
PCDHGA3-202ENST00000612467 DEFB124Q8NES8 71 aa12□□□□□ -0.49
PCDHGA3-202ENST00000612467 LILRB1Q8NHL6 650 aaPredicted RBP12□□□□□ -0.49
PCDHGA3-202ENST00000612467 MRPL30Q8TCC3 161 aaKnown RBP12□□□□□ -0.49
PCDHGA3-202ENST00000612467 BCL2L2Q92843 193 aaPredicted RBP12□□□□□ -0.49
PCDHGA3-202ENST00000612467 FER1L6-AS2Q96M78 137 aa12□□□□□ -0.49
PCDHGA3-202ENST00000612467 SUCNR1Q9BXA5 334 aa12□□□□□ -0.49
PCDHGA3-202ENST00000612467 OR1A1Q9P1Q5 309 aa12□□□□□ -0.49
PCDHGA3-202ENST00000612467 ICE1Q9Y2F5 2266 aa12□□□□□ -0.49
PCDHGA3-202ENST00000612467 CADP27708 2225 aa12□□□□□ -0.49
PCDHGA3-202ENST00000612467 ANKRD30BLA7E2S9 258 aa12□□□□□ -0.49
PCDHGA3-202ENST00000612467 H0YL77 283 aa12□□□□□ -0.49
PCDHGA3-202ENST00000612467 ADAM20O43506 726 aa12□□□□□ -0.49
PCDHGA3-202ENST00000612467 NDUFA2O43678 99 aa12□□□□□ -0.49
PCDHGA3-202ENST00000612467 AGFG2O95081 481 aa12□□□□□ -0.49
Retrieved 100 of 20,778 RNA–protein pairs in 131.9 ms