RNA–Protein interactions for RNA: ENST00000604367.1

CCDC12-211, Transcript of coiled-coil domain containing 12, humanhuman

Gene CCDC12, Length 2,412 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC12-211ENST00000604367 LUMP51884 338 aaPredicted RBP12.8□□□□□ -0.36
CCDC12-211ENST00000604367 S100A10P60903 97 aa12.8□□□□□ -0.36
CCDC12-211ENST00000604367 RAB32Q13637 225 aa12.8□□□□□ -0.36
CCDC12-211ENST00000604367 IL13RA2Q14627 380 aa12.8□□□□□ -0.36
CCDC12-211ENST00000604367 HERPUD1Q15011 391 aa12.8□□□□□ -0.36
CCDC12-211ENST00000604367 C1orf185Q5T7R7 199 aa12.8□□□□□ -0.36
CCDC12-211ENST00000604367 ZNF474Q6S9Z5 364 aaPredicted RBP12.8□□□□□ -0.36
CCDC12-211ENST00000604367 FAM180AQ6UWF9 173 aa12.8□□□□□ -0.36
CCDC12-211ENST00000604367 SLC38A6Q8IZM9 456 aa12.8□□□□□ -0.36
CCDC12-211ENST00000604367 MRPL30Q8TCC3 161 aaKnown RBP12.8□□□□□ -0.36
CCDC12-211ENST00000604367 BOD1Q96IK1 185 aa12.8□□□□□ -0.36
CCDC12-211ENST00000604367 ZNF471Q9BX82 626 aaPredicted RBP12.8□□□□□ -0.36
CCDC12-211ENST00000604367 MSL2Q9HCI7 577 aa12.8□□□□□ -0.36
CCDC12-211ENST00000604367 PURGQ9UJV8 347 aaKnown RBP12.8□□□□□ -0.36
CCDC12-211ENST00000604367 TP53TG5Q9Y2B4 290 aa12.8□□□□□ -0.36
CCDC12-211ENST00000604367 B3GALNT1O75752 331 aa12.79□□□□□ -0.36
CCDC12-211ENST00000604367 NXPH2O95156 264 aa12.79□□□□□ -0.36
CCDC12-211ENST00000604367 IAH1Q2TAA2 248 aaPredicted RBP12.79□□□□□ -0.36
CCDC12-211ENST00000604367 ZNF826PQ6ZT77 177 aa12.79□□□□□ -0.36
CCDC12-211ENST00000604367 SCARB1Q8WTV0 552 aa12.79□□□□□ -0.36
CCDC12-211ENST00000604367 SECTM1Q8WVN6 248 aa12.79□□□□□ -0.36
CCDC12-211ENST00000604367 ST8SIA2Q92186 375 aa12.79□□□□□ -0.36
CCDC12-211ENST00000604367 MRPL24Q96A35 216 aaKnown RBP12.79□□□□□ -0.36
CCDC12-211ENST00000604367 RRNAD1Q96FB5 475 aaKnown RBP12.79□□□□□ -0.36
CCDC12-211ENST00000604367 OR5AC2Q9NZP5 309 aa12.79□□□□□ -0.36
CCDC12-211ENST00000604367 ATP23Q9Y6H3 246 aa12.79□□□□□ -0.36
CCDC12-211ENST00000604367 TRAV39A0A0B4J263 110 aa12.79□□□□□ -0.36
CCDC12-211ENST00000604367 IGHV2OR16-5A0A0B4J2B6 119 aa12.79□□□□□ -0.36
CCDC12-211ENST00000604367 TRDCB7Z8K6 153 aa12.79□□□□□ -0.36
CCDC12-211ENST00000604367 BCL2L11O43521 198 aa12.79□□□□□ -0.36
CCDC12-211ENST00000604367 IGLV1-44P01699 117 aa12.79□□□□□ -0.36
CCDC12-211ENST00000604367 ZNF83P51522 516 aa12.79□□□□□ -0.36
CCDC12-211ENST00000604367 CTAG1AP78358 180 aa12.79□□□□□ -0.36
CCDC12-211ENST00000604367 ESCO2Q56NI9 601 aa12.79□□□□□ -0.36
CCDC12-211ENST00000604367 UNQ6126/PRO20091Q6UXV3 157 aa12.79□□□□□ -0.36
CCDC12-211ENST00000604367 COMMD7Q86VX2 200 aa12.79□□□□□ -0.36
CCDC12-211ENST00000604367 SPACA3Q8IXA5 215 aa12.79□□□□□ -0.36
CCDC12-211ENST00000604367 POC1AQ8NBT0 407 aa12.79□□□□□ -0.36
CCDC12-211ENST00000604367 OR8G5Q8NG78 346 aa12.79□□□□□ -0.36
CCDC12-211ENST00000604367 S100PBPQ96BU1 408 aa12.79□□□□□ -0.36
CCDC12-211ENST00000604367 PIK3IP1Q96FE7 263 aa12.79□□□□□ -0.36
CCDC12-211ENST00000604367 RASL12Q9NYN1 266 aa12.79□□□□□ -0.36
CCDC12-211ENST00000604367 IGKV1-6A0A0C4DH72 117 aa12.78□□□□□ -0.36
CCDC12-211ENST00000604367 KIR2DS1A0A191URI9 304 aa12.78□□□□□ -0.36
CCDC12-211ENST00000604367 DIRAS3O95661 229 aa12.78□□□□□ -0.36
CCDC12-211ENST00000604367 OR2H2O95918 312 aa12.78□□□□□ -0.36
CCDC12-211ENST00000604367 KIR2DS4P43632 304 aa12.78□□□□□ -0.36
CCDC12-211ENST00000604367 KIR2DS1Q14954 304 aa12.78□□□□□ -0.36
CCDC12-211ENST00000604367 PAN3Q58A45 887 aaKnown RBP12.78□□□□□ -0.36
CCDC12-211ENST00000604367 SPIN3Q5JUX0 258 aa12.78□□□□□ -0.36
CCDC12-211ENST00000604367 GGNBP1Q5YKI7 109 aa12.78□□□□□ -0.36
CCDC12-211ENST00000604367 Q6P435 159 aa12.78□□□□□ -0.36
CCDC12-211ENST00000604367 Q6ZS49 121 aa12.78□□□□□ -0.36
CCDC12-211ENST00000604367 GPHA2Q96T91 129 aa12.78□□□□□ -0.36
CCDC12-211ENST00000604367 SYT3Q9BQG1 590 aa12.78□□□□□ -0.36
CCDC12-211ENST00000604367 NRIP2Q9BQI9 281 aa12.78□□□□□ -0.36
CCDC12-211ENST00000604367 OR14J1Q9UGF5 321 aa12.78□□□□□ -0.36
CCDC12-211ENST00000604367 SLC25A15Q9Y619 301 aa12.78□□□□□ -0.36
CCDC12-211ENST00000604367 PHF1O43189 567 aaPredicted RBP12.78□□□□□ -0.36
CCDC12-211ENST00000604367 PGA5P0DJD9 388 aa12.78□□□□□ -0.36
CCDC12-211ENST00000604367 GCH1P30793 250 aa12.78□□□□□ -0.36
CCDC12-211ENST00000604367 GNRHRP30968 328 aa12.78□□□□□ -0.36
CCDC12-211ENST00000604367 ERVK11-1P61568 191 aa12.78□□□□□ -0.36
CCDC12-211ENST00000604367 TMEM187Q14656 261 aa12.78□□□□□ -0.36
CCDC12-211ENST00000604367 ZGRF1Q86YA3 2104 aa12.78□□□□□ -0.36
CCDC12-211ENST00000604367 RELL2Q8NC24 303 aaPredicted RBP12.78□□□□□ -0.36
CCDC12-211ENST00000604367 CXorf58Q96LI9 332 aa12.78□□□□□ -0.36
CCDC12-211ENST00000604367 RSRP1Q9BUV0 290 aa12.78□□□□□ -0.36
CCDC12-211ENST00000604367 BCL2L14Q9BZR8 327 aa12.78□□□□□ -0.36
CCDC12-211ENST00000604367 A6NLC8 198 aa12.77□□□□□ -0.37
CCDC12-211ENST00000604367 F5H0A9 414 aaPredicted RBP12.77□□□□□ -0.37
CCDC12-211ENST00000604367 IFNA21P01568 189 aa12.77□□□□□ -0.37
CCDC12-211ENST00000604367 NMBP08949 121 aa12.77□□□□□ -0.37
CCDC12-211ENST00000604367 CEBPDP49716 269 aaPredicted RBP12.77□□□□□ -0.37
CCDC12-211ENST00000604367 UCP3P55916 312 aa12.77□□□□□ -0.37
CCDC12-211ENST00000604367 PRAMEF6Q5VXH4 476 aa12.77□□□□□ -0.37
CCDC12-211ENST00000604367 PRR18Q8N4B5 295 aa12.77□□□□□ -0.37
CCDC12-211ENST00000604367 CISD2Q8N5K1 135 aaKnown RBP12.77□□□□□ -0.37
CCDC12-211ENST00000604367 UFSP2Q9NUQ7 469 aa12.77□□□□□ -0.37
CCDC12-211ENST00000604367 WASF3Q9UPY6 502 aa12.77□□□□□ -0.37
CCDC12-211ENST00000604367 IGKV1D-13A0A0B4J2D9 117 aa12.77□□□□□ -0.37
CCDC12-211ENST00000604367 MSGN1A6NI15 193 aa12.77□□□□□ -0.37
CCDC12-211ENST00000604367 TEX46H3BTG2 121 aa12.77□□□□□ -0.37
CCDC12-211ENST00000604367 M0R1B8 84 aa12.77□□□□□ -0.37
CCDC12-211ENST00000604367 IGKV1-13P0DP09 117 aa12.77□□□□□ -0.37
CCDC12-211ENST00000604367 UBA52P62987 128 aaKnown RBP12.77□□□□□ -0.37
CCDC12-211ENST00000604367 SRSF7Q16629 238 aaKnown RBP eCLIP12.77□□□□□ -0.37
CCDC12-211ENST00000604367 ZNF718Q3SXZ3 478 aa12.77□□□□□ -0.37
CCDC12-211ENST00000604367 KRTCAP3Q53RY4 240 aa12.77□□□□□ -0.37
CCDC12-211ENST00000604367 FAM74A1Q5RGS3 127 aa12.77□□□□□ -0.37
CCDC12-211ENST00000604367 PRSS54Q6PEW0 395 aa12.77□□□□□ -0.37
CCDC12-211ENST00000604367 MEX3BQ6ZN04 569 aaKnown RBP12.77□□□□□ -0.37
CCDC12-211ENST00000604367 Q6ZR03 302 aa12.77□□□□□ -0.37
CCDC12-211ENST00000604367 LYZL2Q7Z4W2 148 aa12.77□□□□□ -0.37
CCDC12-211ENST00000604367 Q8IYB0 196 aa12.77□□□□□ -0.37
CCDC12-211ENST00000604367 ZNF565Q8N9K5 539 aa12.77□□□□□ -0.37
CCDC12-211ENST00000604367 FAM57AQ8TBR7 257 aa12.77□□□□□ -0.37
CCDC12-211ENST00000604367 GLYATL2Q8WU03 294 aa12.77□□□□□ -0.37
CCDC12-211ENST00000604367 IL1F10Q8WWZ1 152 aa12.77□□□□□ -0.37
CCDC12-211ENST00000604367 GALNT14Q96FL9 552 aa12.77□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 81.2 ms