RNA–Protein interactions for RNA: ENST00000600274.5

ARHGEF1-220, Transcript of Rho guanine nucleotide exchange factor 1, humanhuman

TSL 1 (best)

Gene ARHGEF1, Length 3,439 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ARHGEF1-220ENST00000600274 RHOFQ9HBH0 211 aa9.93□□□□□ -0.82
ARHGEF1-220ENST00000600274 RAB18Q9NP72 206 aa9.93□□□□□ -0.82
ARHGEF1-220ENST00000600274 ANKRD30BLA7E2S9 258 aa9.92□□□□□ -0.82
ARHGEF1-220ENST00000600274 C21orf140B9A014 251 aa9.92□□□□□ -0.82
ARHGEF1-220ENST00000600274 SLC25A4P12235 298 aa9.92□□□□□ -0.82
ARHGEF1-220ENST00000600274 GNRHRP30968 328 aa9.92□□□□□ -0.82
ARHGEF1-220ENST00000600274 RBM11P57052 281 aaKnown RBP9.92□□□□□ -0.82
ARHGEF1-220ENST00000600274 PDZD11Q5EBL8 140 aa9.92□□□□□ -0.82
ARHGEF1-220ENST00000600274 MDP1Q86V88 176 aa9.92□□□□□ -0.82
ARHGEF1-220ENST00000600274 PIK3IP1Q96FE7 263 aa9.92□□□□□ -0.82
ARHGEF1-220ENST00000600274 SLC2A9Q9NRM0 540 aa9.92□□□□□ -0.82
ARHGEF1-220ENST00000600274 GTF3C1Q12789 2109 aa9.92□□□□□ -0.82
ARHGEF1-220ENST00000600274 PKDREJQ9NTG1 2253 aa9.92□□□□□ -0.82
ARHGEF1-220ENST00000600274 CD300LBA8K4G0 201 aa9.92□□□□□ -0.82
ARHGEF1-220ENST00000600274 FABP1P07148 127 aa9.92□□□□□ -0.82
ARHGEF1-220ENST00000600274 ZNF708P17019 499 aa9.92□□□□□ -0.82
ARHGEF1-220ENST00000600274 CAV2P51636 162 aa9.92□□□□□ -0.82
ARHGEF1-220ENST00000600274 LHFPL1Q86WI0 220 aa9.92□□□□□ -0.82
ARHGEF1-220ENST00000600274 HSD17B11Q8NBQ5 300 aa9.92□□□□□ -0.82
ARHGEF1-220ENST00000600274 OR51H1Q8NH63 302 aa9.92□□□□□ -0.82
ARHGEF1-220ENST00000600274 URGCP-MRPS24S4R325 110 aa9.92□□□□□ -0.82
ARHGEF1-220ENST00000600274 SIRPB1O00241 398 aa9.92□□□□□ -0.82
ARHGEF1-220ENST00000600274 HSPA12AO43301 675 aa9.92□□□□□ -0.82
ARHGEF1-220ENST00000600274 AGFG2O95081 481 aa9.92□□□□□ -0.82
ARHGEF1-220ENST00000600274 RPL12P30050 165 aaKnown RBP9.92□□□□□ -0.82
ARHGEF1-220ENST00000600274 PPA1Q15181 289 aa9.92□□□□□ -0.82
ARHGEF1-220ENST00000600274 TMEM268Q5VZI3 342 aa9.92□□□□□ -0.82
ARHGEF1-220ENST00000600274 FBXW12Q6X9E4 464 aa9.92□□□□□ -0.82
ARHGEF1-220ENST00000600274 WBP1Q96G27 269 aa9.92□□□□□ -0.82
ARHGEF1-220ENST00000600274 PCSK5Q92824 1860 aa9.92□□□□□ -0.82
ARHGEF1-220ENST00000600274 RHBDL1O75783 438 aa9.91□□□□□ -0.82
ARHGEF1-220ENST00000600274 TSPAN15O95858 294 aa9.91□□□□□ -0.82
ARHGEF1-220ENST00000600274 ARG1P05089 322 aa9.91□□□□□ -0.82
ARHGEF1-220ENST00000600274 OR13C7P0DN81 318 aa9.91□□□□□ -0.82
ARHGEF1-220ENST00000600274 NQO2P16083 231 aa9.91□□□□□ -0.82
ARHGEF1-220ENST00000600274 MEOX2P50222 304 aa9.91□□□□□ -0.82
ARHGEF1-220ENST00000600274 UBE2NP61088 152 aaKnown RBP9.91□□□□□ -0.82
ARHGEF1-220ENST00000600274 HNF4GQ14541 408 aa9.91□□□□□ -0.82
ARHGEF1-220ENST00000600274 HFEQ30201 348 aa9.91□□□□□ -0.82
ARHGEF1-220ENST00000600274 PRSS54Q6PEW0 395 aa9.91□□□□□ -0.82
ARHGEF1-220ENST00000600274 HPSE2Q8WWQ2 592 aa9.91□□□□□ -0.82
ARHGEF1-220ENST00000600274 NMES1Q9C002 83 aa9.91□□□□□ -0.82
ARHGEF1-220ENST00000600274 SLC5A7Q9GZV3 580 aa9.91□□□□□ -0.82
ARHGEF1-220ENST00000600274 UNKLQ9H9P5 680 aaKnown RBP9.91□□□□□ -0.82
ARHGEF1-220ENST00000600274 ZFP57Q9NU63 452 aa9.91□□□□□ -0.82
ARHGEF1-220ENST00000600274 FBXO7Q9Y3I1 522 aa9.91□□□□□ -0.82
ARHGEF1-220ENST00000600274 PUS1Q9Y606 427 aaKnown RBP eCLIP9.91□□□□□ -0.82
ARHGEF1-220ENST00000600274 USF2Q15853 346 aaPredicted RBP9.91□□□□□ -0.82
ARHGEF1-220ENST00000600274 LURAP1LQ8IV03 231 aa9.91□□□□□ -0.82
ARHGEF1-220ENST00000600274 APOBEC3DQ96AK3 386 aaPredicted RBP9.91□□□□□ -0.82
ARHGEF1-220ENST00000600274 PFDN5Q99471 154 aa9.91□□□□□ -0.82
ARHGEF1-220ENST00000600274 NUDT16L1Q9BRJ7 211 aaKnown RBP9.91□□□□□ -0.82
ARHGEF1-220ENST00000600274 TAF9BQ9HBM6 251 aa9.91□□□□□ -0.82
ARHGEF1-220ENST00000600274 UQCC1Q9NVA1 299 aa9.91□□□□□ -0.82
ARHGEF1-220ENST00000600274 MTCH1Q9NZJ7 389 aa9.91□□□□□ -0.82
ARHGEF1-220ENST00000600274 SPRR3Q9UBC9 169 aa9.91□□□□□ -0.82
ARHGEF1-220ENST00000600274 NDRG3Q9UGV2 375 aa9.91□□□□□ -0.82
ARHGEF1-220ENST00000600274 HEATR1Q9H583 2144 aaKnown RBP9.91□□□□□ -0.82
ARHGEF1-220ENST00000600274 A6NLC8 198 aa9.91□□□□□ -0.82
ARHGEF1-220ENST00000600274 DBX1A6NMT0 343 aa9.91□□□□□ -0.82
ARHGEF1-220ENST00000600274 PET100P0DJ07 73 aa9.91□□□□□ -0.82
ARHGEF1-220ENST00000600274 DEFB109BQ30KR1 87 aa9.91□□□□□ -0.82
ARHGEF1-220ENST00000600274 LILRB2Q8N423 598 aa9.91□□□□□ -0.82
ARHGEF1-220ENST00000600274 SLC30A7Q8NEW0 376 aa9.91□□□□□ -0.82
ARHGEF1-220ENST00000600274 OR52M1Q8NGK5 317 aa9.91□□□□□ -0.82
ARHGEF1-220ENST00000600274 SFT2D1Q8WV19 159 aa9.91□□□□□ -0.82
ARHGEF1-220ENST00000600274 C10orf35Q96D05 121 aa9.91□□□□□ -0.82
ARHGEF1-220ENST00000600274 UFSP2Q9NUQ7 469 aa9.91□□□□□ -0.82
ARHGEF1-220ENST00000600274 FBXL17Q9UF56 701 aa9.91□□□□□ -0.82
ARHGEF1-220ENST00000600274 AMDHD2Q9Y303 409 aa9.91□□□□□ -0.82
ARHGEF1-220ENST00000600274 MED12LQ86YW9 2145 aa9.9□□□□□ -0.82
ARHGEF1-220ENST00000600274 CNOT4O95628 575 aaKnown RBP9.9□□□□□ -0.82
ARHGEF1-220ENST00000600274 TFF1P04155 84 aa9.9□□□□□ -0.82
ARHGEF1-220ENST00000600274 TK1P04183 234 aa9.9□□□□□ -0.82
ARHGEF1-220ENST00000600274 SFTA3P0C7M3 94 aa9.9□□□□□ -0.82
ARHGEF1-220ENST00000600274 ZNF883P0CG24 379 aa9.9□□□□□ -0.82
ARHGEF1-220ENST00000600274 Q6ZRG5 221 aa9.9□□□□□ -0.82
ARHGEF1-220ENST00000600274 TMEM217Q8N7C4 229 aa9.9□□□□□ -0.82
ARHGEF1-220ENST00000600274 FDCSPQ8NFU4 85 aa9.9□□□□□ -0.82
ARHGEF1-220ENST00000600274 BSCL2Q96G97 398 aaPredicted RBP9.9□□□□□ -0.82
ARHGEF1-220ENST00000600274 OR2J1Q9GZK6 312 aa9.9□□□□□ -0.82
ARHGEF1-220ENST00000600274 FGF23Q9GZV9 251 aaPredicted RBP9.9□□□□□ -0.82
ARHGEF1-220ENST00000600274 FOXI3A8MTJ6 420 aaPredicted RBP9.9□□□□□ -0.82
ARHGEF1-220ENST00000600274 H3BP45 60 aa9.9□□□□□ -0.82
ARHGEF1-220ENST00000600274 CTSDP07339 412 aaPredicted RBP9.9□□□□□ -0.82
ARHGEF1-220ENST00000600274 RPS2P15880 293 aaKnown RBP9.9□□□□□ -0.82
ARHGEF1-220ENST00000600274 MUC1P15941 1255 aaPredicted RBP9.9□□□□□ -0.82
ARHGEF1-220ENST00000600274 ALDH3B1P43353 468 aa9.9□□□□□ -0.82
ARHGEF1-220ENST00000600274 ZNF345Q14585 488 aa9.9□□□□□ -0.82
ARHGEF1-220ENST00000600274 IZUMO4Q1ZYL8 232 aa9.9□□□□□ -0.82
ARHGEF1-220ENST00000600274 ALKBH6Q3KRA9 238 aa9.9□□□□□ -0.82
ARHGEF1-220ENST00000600274 POC1AQ8NBT0 407 aa9.9□□□□□ -0.82
ARHGEF1-220ENST00000600274 CLCC1Q96S66 551 aa9.9□□□□□ -0.82
ARHGEF1-220ENST00000600274 C1QTNF5Q9BXJ0 243 aa9.9□□□□□ -0.82
ARHGEF1-220ENST00000600274 SPRY4Q9C004 299 aa9.9□□□□□ -0.82
ARHGEF1-220ENST00000600274 NAA60Q9H7X0 242 aa9.9□□□□□ -0.82
ARHGEF1-220ENST00000600274 KCNS2Q9ULS6 477 aa9.9□□□□□ -0.82
ARHGEF1-220ENST00000600274 ANKRD11Q6UB99 2663 aaPredicted RBP9.9□□□□□ -0.83
ARHGEF1-220ENST00000600274 hCG_1809904A0A1W2PP81 198 aa9.89□□□□□ -0.83
ARHGEF1-220ENST00000600274 A0A1W2PR64 198 aa9.89□□□□□ -0.83
Retrieved 100 of 20,778 RNA–protein pairs in 84.9 ms