RNA–Protein interactions for RNA: ENST00000600244.5

SSBP4-207, Transcript of single stranded DNA binding protein 4, humanhuman

TSL 2

Gene SSBP4, Length 622 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP4-207ENST00000600244 TMEM244Q5VVB8 128 aa13.87□□□□□ -0.19
SSBP4-207ENST00000600244 RDH10Q8IZV5 341 aa13.87□□□□□ -0.19
SSBP4-207ENST00000600244 CCDC54Q8NEL0 328 aa13.87□□□□□ -0.19
SSBP4-207ENST00000600244 OR4M1Q8NGD0 313 aa13.87□□□□□ -0.19
SSBP4-207ENST00000600244 SMIM19Q96E16 107 aa13.87□□□□□ -0.19
SSBP4-207ENST00000600244 PGLYRP3Q96LB9 341 aa13.87□□□□□ -0.19
SSBP4-207ENST00000600244 NR1H4Q96RI1 486 aaPredicted RBP13.87□□□□□ -0.19
SSBP4-207ENST00000600244 MICU1Q9BPX6 476 aa13.87□□□□□ -0.19
SSBP4-207ENST00000600244 PDCD1LG2Q9BQ51 273 aa13.87□□□□□ -0.19
SSBP4-207ENST00000600244 SLC25A33Q9BSK2 321 aa13.87□□□□□ -0.19
SSBP4-207ENST00000600244 ISYNA1Q9NPH2 558 aa13.87□□□□□ -0.19
SSBP4-207ENST00000600244 GTF2A1LQ9UNN4 478 aa13.87□□□□□ -0.19
SSBP4-207ENST00000600244 RHBDD3Q9Y3P4 386 aa13.87□□□□□ -0.19
SSBP4-207ENST00000600244 TRBV2A0A0J9YWF9 115 aa13.86□□□□□ -0.19
SSBP4-207ENST00000600244 TRIM64CA6NLI5 447 aa13.86□□□□□ -0.19
SSBP4-207ENST00000600244 DHRS3O75911 302 aa13.86□□□□□ -0.19
SSBP4-207ENST00000600244 GLRA1P23415 457 aa13.86□□□□□ -0.19
SSBP4-207ENST00000600244 CD24P25063 80 aa13.86□□□□□ -0.19
SSBP4-207ENST00000600244 OR3A4PP47883 348 aa13.86□□□□□ -0.19
SSBP4-207ENST00000600244 CAPZA1P52907 286 aa13.86□□□□□ -0.19
SSBP4-207ENST00000600244 TAS2R43P59537 309 aa13.86□□□□□ -0.19
SSBP4-207ENST00000600244 GFOD2Q3B7J2 385 aa13.86□□□□□ -0.19
SSBP4-207ENST00000600244 CSNK2A3Q8NEV1 391 aa13.86□□□□□ -0.19
SSBP4-207ENST00000600244 CAPSLQ8WWF8 208 aa13.86□□□□□ -0.19
SSBP4-207ENST00000600244 RGP1Q92546 391 aaPredicted RBP13.86□□□□□ -0.19
SSBP4-207ENST00000600244 RBM14Q96PK6 669 aaKnown RBP13.86□□□□□ -0.19
SSBP4-207ENST00000600244 FGF23Q9GZV9 251 aaPredicted RBP13.86□□□□□ -0.19
SSBP4-207ENST00000600244 LOC107986453A0A1B0GWG9 222 aa13.85□□□□□ -0.19
SSBP4-207ENST00000600244 TMEM210A6NLX4 147 aa13.85□□□□□ -0.19
SSBP4-207ENST00000600244 MTRF1O75570 445 aaKnown RBP13.85□□□□□ -0.19
SSBP4-207ENST00000600244 OR2F2O95006 317 aa13.85□□□□□ -0.19
SSBP4-207ENST00000600244 LY86O95711 162 aa13.85□□□□□ -0.19
SSBP4-207ENST00000600244 CST4P01036 141 aa13.85□□□□□ -0.19
SSBP4-207ENST00000600244 RPSAP08865 295 aaKnown RBP13.85□□□□□ -0.19
SSBP4-207ENST00000600244 MAP2K3P46734 347 aa13.85□□□□□ -0.19
SSBP4-207ENST00000600244 DYNC1I2Q13409 638 aaKnown RBP13.85□□□□□ -0.19
SSBP4-207ENST00000600244 TPBGQ13641 420 aa13.85□□□□□ -0.19
SSBP4-207ENST00000600244 MED22Q15528 200 aa13.85□□□□□ -0.19
SSBP4-207ENST00000600244 ODF4Q2M2E3 257 aa13.85□□□□□ -0.19
SSBP4-207ENST00000600244 UBE2UQ5VVX9 321 aa13.85□□□□□ -0.19
SSBP4-207ENST00000600244 TMEM42Q69YG0 159 aa13.85□□□□□ -0.19
SSBP4-207ENST00000600244 SVOPQ8N4V2 548 aa13.85□□□□□ -0.19
SSBP4-207ENST00000600244 ZFP41Q8N8Y5 198 aa13.85□□□□□ -0.19
SSBP4-207ENST00000600244 OR10AC1Q8NH08 325 aa13.85□□□□□ -0.19
SSBP4-207ENST00000600244 OR5AK2Q8NH90 309 aa13.85□□□□□ -0.19
SSBP4-207ENST00000600244 HHLA2Q9UM44 414 aa13.85□□□□□ -0.19
SSBP4-207ENST00000600244 SYT7O43581 403 aa13.84□□□□□ -0.19
SSBP4-207ENST00000600244 RBP4P02753 201 aa13.84□□□□□ -0.19
SSBP4-207ENST00000600244 HCKP08631 526 aa13.84□□□□□ -0.19
SSBP4-207ENST00000600244 RPS11P62280 158 aaKnown RBP eCLIP13.84□□□□□ -0.19
SSBP4-207ENST00000600244 MLLT11Q13015 90 aaPredicted RBP13.84□□□□□ -0.19
SSBP4-207ENST00000600244 GPR50Q13585 617 aa13.84□□□□□ -0.19
SSBP4-207ENST00000600244 ZNF367Q7RTV3 350 aa13.84□□□□□ -0.19
SSBP4-207ENST00000600244 CD177Q8N6Q3 437 aa13.84□□□□□ -0.19
SSBP4-207ENST00000600244 ZNF676Q8N7Q3 588 aa13.84□□□□□ -0.19
SSBP4-207ENST00000600244 OR51A4Q8NGJ6 313 aa13.84□□□□□ -0.19
SSBP4-207ENST00000600244 OR5P3Q8WZ94 311 aa13.84□□□□□ -0.19
SSBP4-207ENST00000600244 DDB2Q92466 427 aa13.84□□□□□ -0.19
SSBP4-207ENST00000600244 GHSRQ92847 366 aa13.84□□□□□ -0.19
SSBP4-207ENST00000600244 OPALINQ96PE5 141 aa13.84□□□□□ -0.19
SSBP4-207ENST00000600244 MGLLQ99685 303 aa13.84□□□□□ -0.19
SSBP4-207ENST00000600244 RTL8AQ9BWD3 113 aa13.84□□□□□ -0.19
SSBP4-207ENST00000600244 PAPOLGQ9BWT3 736 aaKnown RBP13.84□□□□□ -0.19
SSBP4-207ENST00000600244 ANXA2P2A6NMY6 339 aa13.83□□□□□ -0.2
SSBP4-207ENST00000600244 CPEP16870 476 aa13.83□□□□□ -0.2
SSBP4-207ENST00000600244 CELP19835 753 aa13.83□□□□□ -0.2
SSBP4-207ENST00000600244 RIPPLY1Q0D2K3 151 aa13.83□□□□□ -0.2
SSBP4-207ENST00000600244 ZNF260Q3ZCT1 412 aa13.83□□□□□ -0.2
SSBP4-207ENST00000600244 C9orf152Q5JTZ5 239 aa13.83□□□□□ -0.2
SSBP4-207ENST00000600244 COMMD2Q86X83 199 aa13.83□□□□□ -0.2
SSBP4-207ENST00000600244 TSPAN14Q8NG11 270 aa13.83□□□□□ -0.2
SSBP4-207ENST00000600244 FCGR1BQ92637 280 aa13.83□□□□□ -0.2
SSBP4-207ENST00000600244 C10orf35Q96D05 121 aa13.83□□□□□ -0.2
SSBP4-207ENST00000600244 COMMD4Q9H0A8 199 aa13.83□□□□□ -0.2
SSBP4-207ENST00000600244 HECTD4Q9Y4D8 3996 aa13.83□□□□□ -0.2
SSBP4-207ENST00000600244 TRBV5-5A0A0J9YX44 114 aa13.82□□□□□ -0.2
SSBP4-207ENST00000600244 KIR2DS1Q14954 304 aa13.82□□□□□ -0.2
SSBP4-207ENST00000600244 YIF1BQ5BJH7 314 aa13.82□□□□□ -0.2
SSBP4-207ENST00000600244 ZNF561Q8N587 486 aa13.82□□□□□ -0.2
SSBP4-207ENST00000600244 NDNFQ8TB73 568 aa13.82□□□□□ -0.2
SSBP4-207ENST00000600244 CHPT1Q8WUD6 406 aa13.82□□□□□ -0.2
SSBP4-207ENST00000600244 NOL4LQ96MY1 436 aaPredicted RBP13.82□□□□□ -0.2
SSBP4-207ENST00000600244 PIGLQ9Y2B2 252 aa13.82□□□□□ -0.2
SSBP4-207ENST00000600244 MPC1Q9Y5U8 109 aa13.82□□□□□ -0.2
SSBP4-207ENST00000600244 A0A087WXM4 84 aa13.81□□□□□ -0.2
SSBP4-207ENST00000600244 RFPL4AA6NLU0 287 aa13.81□□□□□ -0.2
SSBP4-207ENST00000600244 RFPL4AL1F8VTS6 287 aa13.81□□□□□ -0.2
SSBP4-207ENST00000600244 H3BSH0 61 aa13.81□□□□□ -0.2
SSBP4-207ENST00000600244 LDLRAD4O15165 306 aa13.81□□□□□ -0.2
SSBP4-207ENST00000600244 ZNF728P0DKX0 622 aa13.81□□□□□ -0.2
SSBP4-207ENST00000600244 SMIM18P0DKX4 95 aa13.81□□□□□ -0.2
SSBP4-207ENST00000600244 INSL3P51460 131 aa13.81□□□□□ -0.2
SSBP4-207ENST00000600244 DEFB136Q30KP8 78 aa13.81□□□□□ -0.2
SSBP4-207ENST00000600244 SYT6Q5T7P8 510 aaPredicted RBP13.81□□□□□ -0.2
SSBP4-207ENST00000600244 FTMTQ8N4E7 242 aa13.81□□□□□ -0.2
SSBP4-207ENST00000600244 PARP16Q8N5Y8 322 aa13.81□□□□□ -0.2
SSBP4-207ENST00000600244 COMMD1Q8N668 190 aa13.81□□□□□ -0.2
SSBP4-207ENST00000600244 OR8U1Q8NH10 309 aa13.81□□□□□ -0.2
SSBP4-207ENST00000600244 GPR148Q8TDV2 347 aa13.81□□□□□ -0.2
SSBP4-207ENST00000600244 ADAT3Q96EY9 351 aaPredicted RBP13.81□□□□□ -0.2
Retrieved 100 of 20,778 RNA–protein pairs in 59.8 ms