RNA–Protein interactions for RNA: ENST00000597901.1

LIG1-215, Transcript of DNA ligase 1, humanhuman

TSL 4

Gene LIG1, Length 565 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIG1-215ENST00000597901 OR4D6Q8NGJ1 314 aa12.12□□□□□ -0.47
LIG1-215ENST00000597901 OR13C5Q8NGS8 318 aa12.12□□□□□ -0.47
LIG1-215ENST00000597901 OR52N1Q8NH53 320 aa12.12□□□□□ -0.47
LIG1-215ENST00000597901 FAM110DQ8TAY7 271 aaPredicted RBP12.12□□□□□ -0.47
LIG1-215ENST00000597901 ZNF596Q8TC21 504 aa12.12□□□□□ -0.47
LIG1-215ENST00000597901 CFHR4Q92496 578 aa12.12□□□□□ -0.47
LIG1-215ENST00000597901 SMIM19Q96E16 107 aa12.12□□□□□ -0.47
LIG1-215ENST00000597901 PRSS22Q9GZN4 317 aa12.12□□□□□ -0.47
LIG1-215ENST00000597901 NCOR1P1Q9H4R4 102 aa12.12□□□□□ -0.47
LIG1-215ENST00000597901 SERTAD4Q9NUC0 356 aa12.12□□□□□ -0.47
LIG1-215ENST00000597901 OR6C3Q9NZP0 311 aa12.12□□□□□ -0.47
LIG1-215ENST00000597901 TRBV5-5A0A0J9YX44 114 aa12.11□□□□□ -0.47
LIG1-215ENST00000597901 KBTBD11-OT1A0A1B0GTJ5 212 aa12.11□□□□□ -0.47
LIG1-215ENST00000597901 FAM172BPA6NC97 362 aa12.11□□□□□ -0.47
LIG1-215ENST00000597901 EFCAB10A6NFE3 127 aa12.11□□□□□ -0.47
LIG1-215ENST00000597901 LEUTXA8MZ59 168 aa12.11□□□□□ -0.47
LIG1-215ENST00000597901 H3BUI4 141 aa12.11□□□□□ -0.47
LIG1-215ENST00000597901 F2RL2O00254 374 aa12.11□□□□□ -0.47
LIG1-215ENST00000597901 HSPB6O14558 160 aa12.11□□□□□ -0.47
LIG1-215ENST00000597901 TOR1AO14656 332 aa12.11□□□□□ -0.47
LIG1-215ENST00000597901 GPX5O75715 221 aa12.11□□□□□ -0.47
LIG1-215ENST00000597901 TSPAN15O95858 294 aa12.11□□□□□ -0.47
LIG1-215ENST00000597901 GNAO1P09471 354 aa12.11□□□□□ -0.47
LIG1-215ENST00000597901 BDKRB2P30411 391 aa12.11□□□□□ -0.47
LIG1-215ENST00000597901 ZNF93P35789 620 aaPredicted RBP12.11□□□□□ -0.47
LIG1-215ENST00000597901 CAPGP40121 348 aa12.11□□□□□ -0.47
LIG1-215ENST00000597901 OR3A4PP47883 348 aa12.11□□□□□ -0.47
LIG1-215ENST00000597901 PRRX1P54821 245 aa12.11□□□□□ -0.47
LIG1-215ENST00000597901 RPS11P62280 158 aaKnown RBP eCLIP12.11□□□□□ -0.47
LIG1-215ENST00000597901 PPP3R1P63098 170 aa12.11□□□□□ -0.47
LIG1-215ENST00000597901 HABP2Q14520 560 aaPredicted RBP12.11□□□□□ -0.47
LIG1-215ENST00000597901 PIGYQ3MUY2 71 aa12.11□□□□□ -0.47
LIG1-215ENST00000597901 PAN3Q58A45 887 aaKnown RBP12.11□□□□□ -0.47
LIG1-215ENST00000597901 UTF1Q5T230 341 aa12.11□□□□□ -0.47
LIG1-215ENST00000597901 OGFRL1Q5TC84 451 aaPredicted RBP12.11□□□□□ -0.47
LIG1-215ENST00000597901 HIST2H2BDQ6DRA6 164 aa12.11□□□□□ -0.47
LIG1-215ENST00000597901 Q6ZS46 218 aa12.11□□□□□ -0.47
LIG1-215ENST00000597901 ZFP41Q8N8Y5 198 aa12.11□□□□□ -0.47
LIG1-215ENST00000597901 FAM192AQ9GZU8 254 aa12.11□□□□□ -0.47
LIG1-215ENST00000597901 METTL9Q9H1A3 318 aa12.11□□□□□ -0.47
LIG1-215ENST00000597901 ZNF286AQ9HBT8 521 aa12.11□□□□□ -0.47
LIG1-215ENST00000597901 KIF25Q9UIL4 384 aa12.11□□□□□ -0.47
LIG1-215ENST00000597901 MEIKINA0A087WXM9 373 aa12.1□□□□□ -0.47
LIG1-215ENST00000597901 A0A087X0M5 115 aa12.1□□□□□ -0.47
LIG1-215ENST00000597901 A0A1B0GX30 115 aa12.1□□□□□ -0.47
LIG1-215ENST00000597901 ANKRD65E5RJM6 399 aa12.1□□□□□ -0.47
LIG1-215ENST00000597901 CASQ2O14958 399 aaPredicted RBP12.1□□□□□ -0.47
LIG1-215ENST00000597901 XPNPEP2O43895 674 aa12.1□□□□□ -0.47
LIG1-215ENST00000597901 CSF1P09603 554 aa12.1□□□□□ -0.47
LIG1-215ENST00000597901 IGFBP3P17936 291 aaPredicted RBP12.1□□□□□ -0.47
LIG1-215ENST00000597901 C21orf33P30042 268 aaPredicted RBP12.1□□□□□ -0.47
LIG1-215ENST00000597901 BRS3P32247 399 aa12.1□□□□□ -0.47
LIG1-215ENST00000597901 C2orf68Q2NKX9 166 aa12.1□□□□□ -0.47
LIG1-215ENST00000597901 Q499Y3 187 aa12.1□□□□□ -0.47
LIG1-215ENST00000597901 YIF1BQ5BJH7 314 aa12.1□□□□□ -0.47
LIG1-215ENST00000597901 DDI2Q5TDH0 399 aa12.1□□□□□ -0.47
LIG1-215ENST00000597901 C8orf59Q8N0T1 100 aaPredicted RBP12.1□□□□□ -0.47
LIG1-215ENST00000597901 OSR2Q8N2R0 312 aa12.1□□□□□ -0.47
LIG1-215ENST00000597901 OR13A1Q8NGR1 328 aa12.1□□□□□ -0.47
LIG1-215ENST00000597901 PLCXD1Q9NUJ7 323 aa12.1□□□□□ -0.47
LIG1-215ENST00000597901 IL36GQ9NZH8 169 aa12.1□□□□□ -0.47
LIG1-215ENST00000597901 PSORS1C1Q9UIG5 152 aa12.1□□□□□ -0.47
LIG1-215ENST00000597901 ST3GAL6Q9Y274 331 aa12.1□□□□□ -0.47
LIG1-215ENST00000597901 A0A1W2PPK0 400 aa12.09□□□□□ -0.47
LIG1-215ENST00000597901 LY6LH3BQJ8 138 aa12.09□□□□□ -0.47
LIG1-215ENST00000597901 BUB1B-PAK6H3BSN5 160 aa12.09□□□□□ -0.47
LIG1-215ENST00000597901 CSTBP04080 98 aaKnown RBP12.09□□□□□ -0.47
LIG1-215ENST00000597901 CD24P25063 80 aa12.09□□□□□ -0.47
LIG1-215ENST00000597901 NFYBP25208 207 aa12.09□□□□□ -0.47
LIG1-215ENST00000597901 KCNJ3P48549 501 aa12.09□□□□□ -0.47
LIG1-215ENST00000597901 RIPK1Q13546 671 aa12.09□□□□□ -0.47
LIG1-215ENST00000597901 RSBN1Q5VWQ0 802 aaPredicted RBP12.09□□□□□ -0.47
LIG1-215ENST00000597901 SUMF2Q8NBJ7 301 aa12.09□□□□□ -0.47
LIG1-215ENST00000597901 BPIFB6Q8NFQ5 453 aa12.09□□□□□ -0.47
LIG1-215ENST00000597901 PLPPR1Q8TBJ4 325 aa12.09□□□□□ -0.47
LIG1-215ENST00000597901 FBLIM1Q8WUP2 373 aa12.09□□□□□ -0.47
LIG1-215ENST00000597901 CREB3L1Q96BA8 519 aa12.09□□□□□ -0.47
LIG1-215ENST00000597901 KIRREL1Q96J84 757 aa12.09□□□□□ -0.47
LIG1-215ENST00000597901 PGLYRP3Q96LB9 341 aa12.09□□□□□ -0.47
LIG1-215ENST00000597901 S100A13Q99584 98 aa12.09□□□□□ -0.47
LIG1-215ENST00000597901 DPCDQ9BVM2 203 aaPredicted RBP12.09□□□□□ -0.47
LIG1-215ENST00000597901 LINC00574Q9H8X3 128 aa12.09□□□□□ -0.47
LIG1-215ENST00000597901 CNOT2Q9NZN8 540 aaKnown RBP12.09□□□□□ -0.47
LIG1-215ENST00000597901 ZNF581Q9P0T4 197 aa12.09□□□□□ -0.47
LIG1-215ENST00000597901 MEGF8Q7Z7M0 2845 aa12.08□□□□□ -0.48
LIG1-215ENST00000597901 TRBV5-7A0A0A0MS05 114 aa12.08□□□□□ -0.48
LIG1-215ENST00000597901 NPIPB11E5RHQ5 1161 aa12.08□□□□□ -0.48
LIG1-215ENST00000597901 GEMIN2O14893 280 aaKnown RBP12.08□□□□□ -0.48
LIG1-215ENST00000597901 CEACAM3P40198 252 aa12.08□□□□□ -0.48
LIG1-215ENST00000597901 PAX5Q02548 391 aa12.08□□□□□ -0.48
LIG1-215ENST00000597901 HLA-DRB5Q30154 266 aa12.08□□□□□ -0.48
LIG1-215ENST00000597901 NHLRC3Q5JS37 347 aa12.08□□□□□ -0.48
LIG1-215ENST00000597901 TPTE2P1Q5T6R2 138 aa12.08□□□□□ -0.48
LIG1-215ENST00000597901 STX19Q8N4C7 294 aa12.08□□□□□ -0.48
LIG1-215ENST00000597901 OR9G1Q8NH87 305 aa12.08□□□□□ -0.48
LIG1-215ENST00000597901 RFESDQ8TAC1 157 aa12.08□□□□□ -0.48
LIG1-215ENST00000597901 TFAP2CQ92754 450 aa12.08□□□□□ -0.48
LIG1-215ENST00000597901 OR5M11Q96RB7 305 aa12.08□□□□□ -0.48
LIG1-215ENST00000597901 ZNF184Q99676 751 aaPredicted RBP12.08□□□□□ -0.48
LIG1-215ENST00000597901 WNT10AQ9GZT5 417 aa12.08□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 48.2 ms