RNA–Protein interactions for RNA: ENST00000596163.5

SHKBP1-212, Transcript of SH3KBP1 binding protein 1, humanhuman

TSL 3

Gene SHKBP1, Length 785 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHKBP1-212ENST00000596163 ATXN7L3Q14CW9 347 aaPredicted RBP14.12□□□□□ -0.15
SHKBP1-212ENST00000596163 SLC9A3R2Q15599 337 aa14.12□□□□□ -0.15
SHKBP1-212ENST00000596163 C1orf100Q5SVJ3 147 aa14.12□□□□□ -0.15
SHKBP1-212ENST00000596163 OR52W1Q6IF63 320 aa14.12□□□□□ -0.15
SHKBP1-212ENST00000596163 ZNF773Q6PK81 442 aa14.12□□□□□ -0.15
SHKBP1-212ENST00000596163 TMEM91Q6ZNR0 172 aa14.12□□□□□ -0.15
SHKBP1-212ENST00000596163 OR4D6Q8NGJ1 314 aa14.12□□□□□ -0.15
SHKBP1-212ENST00000596163 DPCDQ9BVM2 203 aaPredicted RBP14.12□□□□□ -0.15
SHKBP1-212ENST00000596163 DPAGT1Q9H3H5 408 aa14.12□□□□□ -0.15
SHKBP1-212ENST00000596163 POMT1Q9Y6A1 747 aa14.12□□□□□ -0.15
SHKBP1-212ENST00000596163 MDFIC2A0A1B0GVS7 189 aa14.11□□□□□ -0.15
SHKBP1-212ENST00000596163 FAM90A10PA6NDY2 464 aa14.11□□□□□ -0.15
SHKBP1-212ENST00000596163 FAM90A18PA6NE21 464 aa14.11□□□□□ -0.15
SHKBP1-212ENST00000596163 FAM90A16PA6NEW6 464 aa14.11□□□□□ -0.15
SHKBP1-212ENST00000596163 FAM90A20PA6NIJ5 464 aa14.11□□□□□ -0.15
SHKBP1-212ENST00000596163 FAM90A8PA6NJQ4 464 aa14.11□□□□□ -0.15
SHKBP1-212ENST00000596163 FAM90A7PA6NKC0 464 aa14.11□□□□□ -0.15
SHKBP1-212ENST00000596163 FAM90A22PA8MWA6 464 aa14.11□□□□□ -0.15
SHKBP1-212ENST00000596163 FAM90A12PA8MX19 464 aa14.11□□□□□ -0.15
SHKBP1-212ENST00000596163 FAM90A5PA8MXJ8 464 aa14.11□□□□□ -0.15
SHKBP1-212ENST00000596163 FAM90A23PA8MXZ1 464 aa14.11□□□□□ -0.15
SHKBP1-212ENST00000596163 CCRL2O00421 344 aa14.11□□□□□ -0.15
SHKBP1-212ENST00000596163 HSPB6O14558 160 aa14.11□□□□□ -0.15
SHKBP1-212ENST00000596163 CRTAPO75718 401 aaPredicted RBP14.11□□□□□ -0.15
SHKBP1-212ENST00000596163 RNASE1P07998 156 aaKnown RBP14.11□□□□□ -0.15
SHKBP1-212ENST00000596163 MELTFP08582 738 aa14.11□□□□□ -0.15
SHKBP1-212ENST00000596163 FAM90A15PP0C7V4 464 aa14.11□□□□□ -0.15
SHKBP1-212ENST00000596163 FAM90A13PP0C7W8 464 aa14.11□□□□□ -0.15
SHKBP1-212ENST00000596163 FAM90A14PP0C7W9 464 aa14.11□□□□□ -0.15
SHKBP1-212ENST00000596163 FAM90A24PP0C7X0 464 aa14.11□□□□□ -0.15
SHKBP1-212ENST00000596163 COX7A1P24310 79 aa14.11□□□□□ -0.15
SHKBP1-212ENST00000596163 SAA4P35542 130 aa14.11□□□□□ -0.15
SHKBP1-212ENST00000596163 DLX1P56177 255 aa14.11□□□□□ -0.15
SHKBP1-212ENST00000596163 FABP5Q01469 135 aa14.11□□□□□ -0.15
SHKBP1-212ENST00000596163 PRB3Q04118 309 aaPredicted RBP14.11□□□□□ -0.15
SHKBP1-212ENST00000596163 RBM39Q14498 530 aaKnown RBP14.11□□□□□ -0.15
SHKBP1-212ENST00000596163 ATAD3CQ5T2N8 411 aa14.11□□□□□ -0.15
SHKBP1-212ENST00000596163 HCP5Q6MZN7 132 aa14.11□□□□□ -0.15
SHKBP1-212ENST00000596163 ZNF782Q6ZMW2 699 aaPredicted RBP14.11□□□□□ -0.15
SHKBP1-212ENST00000596163 LDLRAD3Q86YD5 345 aa14.11□□□□□ -0.15
SHKBP1-212ENST00000596163 PNKDQ8N490 385 aa14.11□□□□□ -0.15
SHKBP1-212ENST00000596163 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP14.11□□□□□ -0.15
SHKBP1-212ENST00000596163 SUMF2Q8NBJ7 301 aa14.11□□□□□ -0.15
SHKBP1-212ENST00000596163 NDUFB11Q9NX14 153 aa14.11□□□□□ -0.15
SHKBP1-212ENST00000596163 ING3Q9NXR8 418 aa14.11□□□□□ -0.15
SHKBP1-212ENST00000596163 SESN1Q9Y6P5 492 aa14.11□□□□□ -0.15
SHKBP1-212ENST00000596163 CUBNO60494 3623 aa14.11□□□□□ -0.15
SHKBP1-212ENST00000596163 FBN1P35555 2871 aaKnown RBP14.11□□□□□ -0.15
SHKBP1-212ENST00000596163 MEIKINA0A087WXM9 373 aa14.1□□□□□ -0.15
SHKBP1-212ENST00000596163 MEX3AA1L020 520 aaKnown RBP14.1□□□□□ -0.15
SHKBP1-212ENST00000596163 BTBD17A6NE02 478 aa14.1□□□□□ -0.15
SHKBP1-212ENST00000596163 ZNF729A6NN14 1252 aaPredicted RBP14.1□□□□□ -0.15
SHKBP1-212ENST00000596163 CLPXO76031 633 aa14.1□□□□□ -0.15
SHKBP1-212ENST00000596163 MGMTP16455 207 aa14.1□□□□□ -0.15
SHKBP1-212ENST00000596163 GALP22466 123 aa14.1□□□□□ -0.15
SHKBP1-212ENST00000596163 CALRP27797 417 aaKnown RBP14.1□□□□□ -0.15
SHKBP1-212ENST00000596163 PSMB9P28065 219 aa14.1□□□□□ -0.15
SHKBP1-212ENST00000596163 HTR2CP28335 458 aa14.1□□□□□ -0.15
SHKBP1-212ENST00000596163 PAX5Q02548 391 aa14.1□□□□□ -0.15
SHKBP1-212ENST00000596163 SSX1Q16384 188 aa14.1□□□□□ -0.15
SHKBP1-212ENST00000596163 TAF9Q16594 264 aa14.1□□□□□ -0.15
SHKBP1-212ENST00000596163 KCTD21Q4G0X4 260 aa14.1□□□□□ -0.15
SHKBP1-212ENST00000596163 C16orf87Q6PH81 154 aa14.1□□□□□ -0.15
SHKBP1-212ENST00000596163 TCF23Q7RTU1 214 aa14.1□□□□□ -0.15
SHKBP1-212ENST00000596163 OR6M1Q8NGM8 313 aa14.1□□□□□ -0.15
SHKBP1-212ENST00000596163 GCDHQ92947 438 aaPredicted RBP14.1□□□□□ -0.15
SHKBP1-212ENST00000596163 COQ2Q96H96 371 aa14.1□□□□□ -0.15
SHKBP1-212ENST00000596163 DUX5Q96PT3 197 aa14.1□□□□□ -0.15
SHKBP1-212ENST00000596163 SELENOIQ9C0D9 397 aa14.1□□□□□ -0.15
SHKBP1-212ENST00000596163 PPIL3Q9H2H8 161 aaKnown RBP14.1□□□□□ -0.15
SHKBP1-212ENST00000596163 COL6A5A8TX70 2615 aa14.1□□□□□ -0.15
SHKBP1-212ENST00000596163 TRDV1A0A1B0GX56 115 aa14.09□□□□□ -0.15
SHKBP1-212ENST00000596163 A0A1W2PP11 408 aa14.09□□□□□ -0.15
SHKBP1-212ENST00000596163 MCRIP1C9JLW8 97 aa14.09□□□□□ -0.15
SHKBP1-212ENST00000596163 PDCD5O14737 125 aa14.09□□□□□ -0.15
SHKBP1-212ENST00000596163 GLAP06280 429 aa14.09□□□□□ -0.15
SHKBP1-212ENST00000596163 CD37P11049 281 aa14.09□□□□□ -0.15
SHKBP1-212ENST00000596163 SLC35E4Q6ICL7 350 aa14.09□□□□□ -0.15
SHKBP1-212ENST00000596163 HEPN1Q6WQI6 88 aa14.09□□□□□ -0.15
SHKBP1-212ENST00000596163 OR11H6Q8NGC7 330 aa14.09□□□□□ -0.15
SHKBP1-212ENST00000596163 KCNG3Q8TAE7 436 aa14.09□□□□□ -0.15
SHKBP1-212ENST00000596163 NEK7Q8TDX7 302 aa14.09□□□□□ -0.15
SHKBP1-212ENST00000596163 C1orf147Q96MC9 270 aaPredicted RBP14.09□□□□□ -0.15
SHKBP1-212ENST00000596163 BANF2Q9H503 90 aa14.09□□□□□ -0.15
SHKBP1-212ENST00000596163 PLGRKTQ9HBL7 147 aa14.09□□□□□ -0.15
SHKBP1-212ENST00000596163 KIF25Q9UIL4 384 aa14.09□□□□□ -0.15
SHKBP1-212ENST00000596163 TMEM30CPA0ZSE6 113 aa14.08□□□□□ -0.16
SHKBP1-212ENST00000596163 SLC22A1O15245 554 aa14.08□□□□□ -0.16
SHKBP1-212ENST00000596163 BPNT1O95861 308 aa14.08□□□□□ -0.16
SHKBP1-212ENST00000596163 ARG1P05089 322 aa14.08□□□□□ -0.16
SHKBP1-212ENST00000596163 CRYBA1P05813 215 aa14.08□□□□□ -0.16
SHKBP1-212ENST00000596163 MYL9P24844 172 aa14.08□□□□□ -0.16
SHKBP1-212ENST00000596163 IER3P46695 156 aa14.08□□□□□ -0.16
SHKBP1-212ENST00000596163 RSBN1Q5VWQ0 802 aaPredicted RBP14.08□□□□□ -0.16
SHKBP1-212ENST00000596163 CD200R1LQ6Q8B3 271 aa14.08□□□□□ -0.16
SHKBP1-212ENST00000596163 RTN4RL2Q86UN3 420 aa14.08□□□□□ -0.16
SHKBP1-212ENST00000596163 BEND2Q8NDZ0 799 aa14.08□□□□□ -0.16
SHKBP1-212ENST00000596163 TMEM133Q9H2Q1 129 aa14.08□□□□□ -0.16
SHKBP1-212ENST00000596163 ZNRD1Q9P1U0 126 aa14.08□□□□□ -0.16
SHKBP1-212ENST00000596163 AK6Q9Y3D8 172 aaKnown RBP14.08□□□□□ -0.16
Retrieved 100 of 20,778 RNA–protein pairs in 30.3 ms