RNA–Protein interactions for RNA: ENST00000595631.5

SHKBP1-207, Transcript of SH3KBP1 binding protein 1, humanhuman

TSL 4

Gene SHKBP1, Length 552 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHKBP1-207ENST00000595631 FOXRED1Q96CU9 486 aaPredicted RBP11.26□□□□□ -0.61
SHKBP1-207ENST00000595631 OR51E2Q9H255 320 aa11.26□□□□□ -0.61
SHKBP1-207ENST00000595631 UNKLQ9H9P5 680 aaKnown RBP11.26□□□□□ -0.61
SHKBP1-207ENST00000595631 KIF25Q9UIL4 384 aa11.26□□□□□ -0.61
SHKBP1-207ENST00000595631 LINC00312Q9Y6C7 94 aa11.26□□□□□ -0.61
SHKBP1-207ENST00000595631 DNAJC9-AS1A6NH13 148 aa11.25□□□□□ -0.61
SHKBP1-207ENST00000595631 SLC17A2O00624 439 aa11.25□□□□□ -0.61
SHKBP1-207ENST00000595631 NPFFO15130 113 aa11.25□□□□□ -0.61
SHKBP1-207ENST00000595631 GADD45AP24522 165 aa11.25□□□□□ -0.61
SHKBP1-207ENST00000595631 SAA4P35542 130 aa11.25□□□□□ -0.61
SHKBP1-207ENST00000595631 GDNFP39905 211 aa11.25□□□□□ -0.61
SHKBP1-207ENST00000595631 QRFPP83859 136 aa11.25□□□□□ -0.61
SHKBP1-207ENST00000595631 UNC119Q13432 240 aa11.25□□□□□ -0.61
SHKBP1-207ENST00000595631 MPV17LQ2QL34 196 aa11.25□□□□□ -0.61
SHKBP1-207ENST00000595631 HES5Q5TA89 166 aa11.25□□□□□ -0.61
SHKBP1-207ENST00000595631 PRAMEF5Q5TYX0 476 aa11.25□□□□□ -0.61
SHKBP1-207ENST00000595631 RSBN1Q5VWQ0 802 aaPredicted RBP11.25□□□□□ -0.61
SHKBP1-207ENST00000595631 NCR3LG1Q68D85 454 aa11.25□□□□□ -0.61
SHKBP1-207ENST00000595631 SIGIRRQ6IA17 410 aa11.25□□□□□ -0.61
SHKBP1-207ENST00000595631 LINC00596Q86U02 117 aa11.25□□□□□ -0.61
SHKBP1-207ENST00000595631 RTN4RL2Q86UN3 420 aa11.25□□□□□ -0.61
SHKBP1-207ENST00000595631 OR6M1Q8NGM8 313 aa11.25□□□□□ -0.61
SHKBP1-207ENST00000595631 OR13A1Q8NGR1 328 aa11.25□□□□□ -0.61
SHKBP1-207ENST00000595631 C17orf50Q8WW18 174 aa11.25□□□□□ -0.61
SHKBP1-207ENST00000595631 Q96M66 194 aa11.25□□□□□ -0.61
SHKBP1-207ENST00000595631 RNF167Q9H6Y7 350 aa11.25□□□□□ -0.61
SHKBP1-207ENST00000595631 ZNF696Q9H7X3 374 aa11.25□□□□□ -0.61
SHKBP1-207ENST00000595631 IFT22Q9H7X7 185 aa11.25□□□□□ -0.61
SHKBP1-207ENST00000595631 PLGRKTQ9HBL7 147 aa11.25□□□□□ -0.61
SHKBP1-207ENST00000595631 PCDHB16Q9NRJ7 776 aa11.25□□□□□ -0.61
SHKBP1-207ENST00000595631 TXNL4BQ9NX01 149 aaKnown RBP11.25□□□□□ -0.61
SHKBP1-207ENST00000595631 STUB1Q9UNE7 303 aa11.25□□□□□ -0.61
SHKBP1-207ENST00000595631 A0A087WXM4 84 aa11.24□□□□□ -0.61
SHKBP1-207ENST00000595631 MEIKINA0A087WXM9 373 aa11.24□□□□□ -0.61
SHKBP1-207ENST00000595631 TRAV1-2A0A0B4J238 106 aa11.24□□□□□ -0.61
SHKBP1-207ENST00000595631 FAM172BPA6NC97 362 aa11.24□□□□□ -0.61
SHKBP1-207ENST00000595631 RNF212BA8MTL3 300 aa11.24□□□□□ -0.61
SHKBP1-207ENST00000595631 CLPXO76031 633 aa11.24□□□□□ -0.61
SHKBP1-207ENST00000595631 UBBP0CG47 229 aa11.24□□□□□ -0.61
SHKBP1-207ENST00000595631 IGHV1-8P0DP01 117 aa11.24□□□□□ -0.61
SHKBP1-207ENST00000595631 CD36P16671 472 aa11.24□□□□□ -0.61
SHKBP1-207ENST00000595631 OMGP23515 440 aa11.24□□□□□ -0.61
SHKBP1-207ENST00000595631 MYL9P24844 172 aa11.24□□□□□ -0.61
SHKBP1-207ENST00000595631 PAX6P26367 422 aa11.24□□□□□ -0.61
SHKBP1-207ENST00000595631 GLP1RP43220 463 aa11.24□□□□□ -0.61
SHKBP1-207ENST00000595631 GUCA2AQ02747 115 aa11.24□□□□□ -0.61
SHKBP1-207ENST00000595631 BAMBIQ13145 260 aa11.24□□□□□ -0.61
SHKBP1-207ENST00000595631 RAB11BQ15907 218 aa11.24□□□□□ -0.61
SHKBP1-207ENST00000595631 RBMS3Q6XE24 437 aaKnown RBP11.24□□□□□ -0.61
SHKBP1-207ENST00000595631 USP43Q70EL4 1123 aa11.24□□□□□ -0.61
SHKBP1-207ENST00000595631 NR2C2APQ86WQ0 139 aa11.24□□□□□ -0.61
SHKBP1-207ENST00000595631 NEK7Q8TDX7 302 aa11.24□□□□□ -0.61
SHKBP1-207ENST00000595631 DYRK2Q92630 601 aa11.24□□□□□ -0.61
SHKBP1-207ENST00000595631 MRPS24Q96EL2 167 aaKnown RBP11.24□□□□□ -0.61
SHKBP1-207ENST00000595631 CHCHD6Q9BRQ6 235 aa11.24□□□□□ -0.61
SHKBP1-207ENST00000595631 NICN1Q9BSH3 213 aa11.24□□□□□ -0.61
SHKBP1-207ENST00000595631 CST11Q9H112 138 aa11.24□□□□□ -0.61
SHKBP1-207ENST00000595631 TNFRSF19Q9NS68 423 aa11.24□□□□□ -0.61
SHKBP1-207ENST00000595631 RCC2Q9P258 522 aaKnown RBP11.24□□□□□ -0.61
SHKBP1-207ENST00000595631 GHRLQ9UBU3 117 aa11.24□□□□□ -0.61
SHKBP1-207ENST00000595631 UBE2J1Q9Y385 318 aaPredicted RBP11.24□□□□□ -0.61
SHKBP1-207ENST00000595631 V9GY05 133 aa11.24□□□□□ -0.61
SHKBP1-207ENST00000595631 TRGV10A0A0A0MS01 117 aa11.23□□□□□ -0.61
SHKBP1-207ENST00000595631 A0A0A6YYD4 124 aa11.23□□□□□ -0.61
SHKBP1-207ENST00000595631 A0A0A6YYJ9 748 aa11.23□□□□□ -0.61
SHKBP1-207ENST00000595631 hCG_1809904A0A1W2PP81 198 aa11.23□□□□□ -0.61
SHKBP1-207ENST00000595631 A0A1W2PPE2 198 aa11.23□□□□□ -0.61
SHKBP1-207ENST00000595631 A0A1W2PR64 198 aa11.23□□□□□ -0.61
SHKBP1-207ENST00000595631 A0A1W2PRV1 198 aa11.23□□□□□ -0.61
SHKBP1-207ENST00000595631 MEIOCA2RUB1 952 aa11.23□□□□□ -0.61
SHKBP1-207ENST00000595631 FUOMA2VDF0 154 aa11.23□□□□□ -0.61
SHKBP1-207ENST00000595631 TMEM14DPA8MWL7 114 aa11.23□□□□□ -0.61
SHKBP1-207ENST00000595631 BPNT1O95861 308 aa11.23□□□□□ -0.61
SHKBP1-207ENST00000595631 GALP22466 123 aa11.23□□□□□ -0.61
SHKBP1-207ENST00000595631 UBE2E1P51965 193 aa11.23□□□□□ -0.61
SHKBP1-207ENST00000595631 BPIFB3P59826 476 aa11.23□□□□□ -0.61
SHKBP1-207ENST00000595631 PLA2G7Q13093 441 aa11.23□□□□□ -0.61
SHKBP1-207ENST00000595631 C17orf58Q2M2W7 97 aa11.23□□□□□ -0.61
SHKBP1-207ENST00000595631 UTF1Q5T230 341 aa11.23□□□□□ -0.61
SHKBP1-207ENST00000595631 RAB12Q6IQ22 244 aa11.23□□□□□ -0.61
SHKBP1-207ENST00000595631 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP11.23□□□□□ -0.61
SHKBP1-207ENST00000595631 OR51D1Q8NGF3 324 aa11.23□□□□□ -0.61
SHKBP1-207ENST00000595631 CORO2AQ92828 525 aa11.23□□□□□ -0.61
SHKBP1-207ENST00000595631 ZDHHC16Q969W1 377 aa11.23□□□□□ -0.61
SHKBP1-207ENST00000595631 TMEM59Q9BXS4 323 aa11.23□□□□□ -0.61
SHKBP1-207ENST00000595631 PEX16Q9Y5Y5 336 aa11.23□□□□□ -0.61
SHKBP1-207ENST00000595631 FBN1P35555 2871 aaKnown RBP11.23□□□□□ -0.61
SHKBP1-207ENST00000595631 A0A0B4J203 849 aa11.22□□□□□ -0.61
SHKBP1-207ENST00000595631 LOC100506127A0A0U1RQW1 187 aa11.22□□□□□ -0.61
SHKBP1-207ENST00000595631 UBE2QL1A1L167 161 aa11.22□□□□□ -0.61
SHKBP1-207ENST00000595631 TRIM64CA6NLI5 447 aa11.22□□□□□ -0.61
SHKBP1-207ENST00000595631 HOXA3O43365 443 aaPredicted RBP11.22□□□□□ -0.61
SHKBP1-207ENST00000595631 RBP4P02753 201 aa11.22□□□□□ -0.61
SHKBP1-207ENST00000595631 MELTFP08582 738 aa11.22□□□□□ -0.61
SHKBP1-207ENST00000595631 SMIM18P0DKX4 95 aa11.22□□□□□ -0.61
SHKBP1-207ENST00000595631 ARSBP15848 533 aa11.22□□□□□ -0.61
SHKBP1-207ENST00000595631 RAB3BP20337 219 aa11.22□□□□□ -0.61
SHKBP1-207ENST00000595631 CDK2P24941 298 aa11.22□□□□□ -0.61
SHKBP1-207ENST00000595631 FGF9P31371 208 aaPredicted RBP11.22□□□□□ -0.61
SHKBP1-207ENST00000595631 RPS27AP62979 156 aaKnown RBP11.22□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 48.6 ms