RNA–Protein interactions for RNA: ENST00000593026.1

DDX39A-221, Transcript of DExD-box helicase 39A, humanhuman

TSL 3

Gene DDX39A, Length 657 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX39A-221ENST00000593026 VMO1Q7Z5L0 202 aa12.28□□□□□ -0.44
DDX39A-221ENST00000593026 COQ2Q96H96 371 aa12.28□□□□□ -0.44
DDX39A-221ENST00000593026 TBX15Q96SF7 602 aa12.28□□□□□ -0.44
DDX39A-221ENST00000593026 LINC00312Q9Y6C7 94 aa12.28□□□□□ -0.44
DDX39A-221ENST00000593026 hCG_1809904A0A1W2PP81 198 aa12.27□□□□□ -0.45
DDX39A-221ENST00000593026 A0A1W2PPE2 198 aa12.27□□□□□ -0.45
DDX39A-221ENST00000593026 A0A1W2PR64 198 aa12.27□□□□□ -0.45
DDX39A-221ENST00000593026 A0A1W2PRV1 198 aa12.27□□□□□ -0.45
DDX39A-221ENST00000593026 PDCD6O75340 191 aa12.27□□□□□ -0.45
DDX39A-221ENST00000593026 CLEC2LP0C7M8 214 aa12.27□□□□□ -0.45
DDX39A-221ENST00000593026 SLC2A2P11168 524 aaPredicted RBP12.27□□□□□ -0.45
DDX39A-221ENST00000593026 CCL3L1P16619 93 aa12.27□□□□□ -0.45
DDX39A-221ENST00000593026 GLIPR1P48060 266 aa12.27□□□□□ -0.45
DDX39A-221ENST00000593026 ALDH3B2P48448 385 aa12.27□□□□□ -0.45
DDX39A-221ENST00000593026 SCGB2A2Q13296 93 aa12.27□□□□□ -0.45
DDX39A-221ENST00000593026 C2orf76Q3KRA6 126 aa12.27□□□□□ -0.45
DDX39A-221ENST00000593026 KLF17Q5JT82 389 aaPredicted RBP12.27□□□□□ -0.45
DDX39A-221ENST00000593026 GPR157Q5UAW9 335 aa12.27□□□□□ -0.45
DDX39A-221ENST00000593026 RAB12Q6IQ22 244 aa12.27□□□□□ -0.45
DDX39A-221ENST00000593026 C1orf122Q6ZSJ8 110 aa12.27□□□□□ -0.45
DDX39A-221ENST00000593026 GPR141Q7Z602 305 aa12.27□□□□□ -0.45
DDX39A-221ENST00000593026 TRAPPC6BQ86SZ2 158 aa12.27□□□□□ -0.45
DDX39A-221ENST00000593026 Q8N7P7 452 aa12.27□□□□□ -0.45
DDX39A-221ENST00000593026 NEK7Q8TDX7 302 aa12.27□□□□□ -0.45
DDX39A-221ENST00000593026 URM1Q9BTM9 101 aaKnown RBP12.27□□□□□ -0.45
DDX39A-221ENST00000593026 TM2D1Q9BX74 207 aa12.27□□□□□ -0.45
DDX39A-221ENST00000593026 BARHL1Q9BZE3 327 aa12.27□□□□□ -0.45
DDX39A-221ENST00000593026 METTL8Q9H825 291 aaKnown RBP12.27□□□□□ -0.45
DDX39A-221ENST00000593026 LIN7BQ9HAP6 207 aa12.27□□□□□ -0.45
DDX39A-221ENST00000593026 SIRT7Q9NRC8 400 aa12.27□□□□□ -0.45
DDX39A-221ENST00000593026 RCC2Q9P258 522 aaKnown RBP12.27□□□□□ -0.45
DDX39A-221ENST00000593026 FBLN5Q9UBX5 448 aa12.27□□□□□ -0.45
DDX39A-221ENST00000593026 NUP50Q9UKX7 468 aa12.27□□□□□ -0.45
DDX39A-221ENST00000593026 IGHV3OR16-10A0A075B7F0 116 aa12.26□□□□□ -0.45
DDX39A-221ENST00000593026 TRGV10A0A0A0MS01 117 aa12.26□□□□□ -0.45
DDX39A-221ENST00000593026 ODAMA1E959 279 aa12.26□□□□□ -0.45
DDX39A-221ENST00000593026 MCRIP1C9JLW8 97 aa12.26□□□□□ -0.45
DDX39A-221ENST00000593026 ZNF728P0DKX0 622 aa12.26□□□□□ -0.45
DDX39A-221ENST00000593026 IGHV4-38-2P0DP08 117 aa12.26□□□□□ -0.45
DDX39A-221ENST00000593026 FUT3P21217 361 aa12.26□□□□□ -0.45
DDX39A-221ENST00000593026 EPHA1P21709 976 aa12.26□□□□□ -0.45
DDX39A-221ENST00000593026 TGFBR1P36897 503 aa12.26□□□□□ -0.45
DDX39A-221ENST00000593026 PAX5Q02548 391 aa12.26□□□□□ -0.45
DDX39A-221ENST00000593026 RBM39Q14498 530 aaKnown RBP12.26□□□□□ -0.45
DDX39A-221ENST00000593026 RSBN1Q5VWQ0 802 aaPredicted RBP12.26□□□□□ -0.45
DDX39A-221ENST00000593026 SFXN4Q6P4A7 337 aa12.26□□□□□ -0.45
DDX39A-221ENST00000593026 BRICD5Q6PL45 260 aa12.26□□□□□ -0.45
DDX39A-221ENST00000593026 TCF23Q7RTU1 214 aa12.26□□□□□ -0.45
DDX39A-221ENST00000593026 PLPPR1Q8TBJ4 325 aa12.26□□□□□ -0.45
DDX39A-221ENST00000593026 LHX4Q969G2 390 aa12.26□□□□□ -0.45
DDX39A-221ENST00000593026 ZNF714Q96N38 554 aa12.26□□□□□ -0.45
DDX39A-221ENST00000593026 NEDD4LQ96PU5 975 aa12.26□□□□□ -0.45
DDX39A-221ENST00000593026 NICN1Q9BSH3 213 aa12.26□□□□□ -0.45
DDX39A-221ENST00000593026 LPAR5Q9H1C0 372 aa12.26□□□□□ -0.45
DDX39A-221ENST00000593026 DAPK2Q9UIK4 370 aa12.26□□□□□ -0.45
DDX39A-221ENST00000593026 KIF25Q9UIL4 384 aa12.26□□□□□ -0.45
DDX39A-221ENST00000593026 PEX16Q9Y5Y5 336 aa12.26□□□□□ -0.45
DDX39A-221ENST00000593026 SVEP1Q4LDE5 3571 aa12.26□□□□□ -0.45
DDX39A-221ENST00000593026 DSCAML1Q8TD84 2053 aa12.25□□□□□ -0.45
DDX39A-221ENST00000593026 ANK3Q12955 4377 aaKnown RBP12.25□□□□□ -0.45
DDX39A-221ENST00000593026 MEIKINA0A087WXM9 373 aa12.25□□□□□ -0.45
DDX39A-221ENST00000593026 A0A0B4J203 849 aa12.25□□□□□ -0.45
DDX39A-221ENST00000593026 TMEM272A0A1B0GTI8 110 aa12.25□□□□□ -0.45
DDX39A-221ENST00000593026 LDLRAD4O15165 306 aa12.25□□□□□ -0.45
DDX39A-221ENST00000593026 GLAP06280 429 aa12.25□□□□□ -0.45
DDX39A-221ENST00000593026 PRTN3P24158 256 aa12.25□□□□□ -0.45
DDX39A-221ENST00000593026 DLX6P56179 175 aa12.25□□□□□ -0.45
DDX39A-221ENST00000593026 NKAPLQ5M9Q1 402 aa12.25□□□□□ -0.45
DDX39A-221ENST00000593026 GPR107Q5VW38 600 aa12.25□□□□□ -0.45
DDX39A-221ENST00000593026 SIGIRRQ6IA17 410 aa12.25□□□□□ -0.45
DDX39A-221ENST00000593026 ANKRD13BQ86YJ7 626 aa12.25□□□□□ -0.45
DDX39A-221ENST00000593026 GAL3ST2Q9H3Q3 398 aa12.25□□□□□ -0.45
DDX39A-221ENST00000593026 NCOR1P1Q9H4R4 102 aa12.25□□□□□ -0.45
DDX39A-221ENST00000593026 UNKLQ9H9P5 680 aaKnown RBP12.25□□□□□ -0.45
DDX39A-221ENST00000593026 OR6C3Q9NZP0 311 aa12.25□□□□□ -0.45
DDX39A-221ENST00000593026 SCOCQ9UIL1 159 aa12.25□□□□□ -0.45
DDX39A-221ENST00000593026 RAB22AQ9UL26 194 aa12.25□□□□□ -0.45
DDX39A-221ENST00000593026 UBE2J1Q9Y385 318 aaPredicted RBP12.25□□□□□ -0.45
DDX39A-221ENST00000593026 CENPVL3A0A0U1RRI6 287 aa12.24□□□□□ -0.45
DDX39A-221ENST00000593026 TMEM30CPA0ZSE6 113 aa12.24□□□□□ -0.45
DDX39A-221ENST00000593026 C17orf98A8MV24 154 aa12.24□□□□□ -0.45
DDX39A-221ENST00000593026 GABARAPO95166 117 aa12.24□□□□□ -0.45
DDX39A-221ENST00000593026 RBP4P02753 201 aa12.24□□□□□ -0.45
DDX39A-221ENST00000593026 CHATP28329 748 aa12.24□□□□□ -0.45
DDX39A-221ENST00000593026 BLVRBP30043 206 aaPredicted RBP12.24□□□□□ -0.45
DDX39A-221ENST00000593026 GLP1RP43220 463 aa12.24□□□□□ -0.45
DDX39A-221ENST00000593026 RPL5P46777 297 aaKnown RBP12.24□□□□□ -0.45
DDX39A-221ENST00000593026 DLX1P56177 255 aa12.24□□□□□ -0.45
DDX39A-221ENST00000593026 NCS1P62166 190 aa12.24□□□□□ -0.45
DDX39A-221ENST00000593026 PRB3Q04118 309 aaPredicted RBP12.24□□□□□ -0.45
DDX39A-221ENST00000593026 NCR3LG1Q68D85 454 aa12.24□□□□□ -0.45
DDX39A-221ENST00000593026 SLC35E4Q6ICL7 350 aa12.24□□□□□ -0.45
DDX39A-221ENST00000593026 SLC16A12Q6ZSM3 486 aa12.24□□□□□ -0.45
DDX39A-221ENST00000593026 C11orf42Q8N5U0 333 aa12.24□□□□□ -0.45
DDX39A-221ENST00000593026 CORO2AQ92828 525 aa12.24□□□□□ -0.45
DDX39A-221ENST00000593026 MS4A7Q9GZW8 240 aaPredicted RBP12.24□□□□□ -0.45
DDX39A-221ENST00000593026 ETAA1Q9NY74 926 aa12.24□□□□□ -0.45
DDX39A-221ENST00000593026 TAS2R3Q9NYW6 316 aa12.24□□□□□ -0.45
DDX39A-221ENST00000593026 NAV3Q8IVL0 2385 aa12.23□□□□□ -0.45
DDX39A-221ENST00000593026 A0A0A6YYD4 124 aa12.23□□□□□ -0.45
Retrieved 100 of 20,778 RNA–protein pairs in 36.1 ms