RNA–Protein interactions for RNA: ENST00000593008.1

DDX39A-220, Transcript of DExD-box helicase 39A, humanhuman

TSL 3

Gene DDX39A, Length 538 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX39A-220ENST00000593008 GRK1Q15835 563 aa7.97□□□□□ -1.13
DDX39A-220ENST00000593008 UBE2NLQ5JXB2 153 aa7.97□□□□□ -1.13
DDX39A-220ENST00000593008 UTF1Q5T230 341 aa7.97□□□□□ -1.13
DDX39A-220ENST00000593008 ATPAF1Q5TC12 328 aaPredicted RBP7.97□□□□□ -1.13
DDX39A-220ENST00000593008 WDR25Q64LD2 544 aaPredicted RBP7.97□□□□□ -1.13
DDX39A-220ENST00000593008 FAM53AQ6NSI3 398 aaPredicted RBP7.97□□□□□ -1.13
DDX39A-220ENST00000593008 CNIH2Q6PI25 160 aa7.97□□□□□ -1.13
DDX39A-220ENST00000593008 MUC20Q8N307 709 aaPredicted RBP7.97□□□□□ -1.13
DDX39A-220ENST00000593008 FAM89BQ8N5H3 189 aa7.97□□□□□ -1.13
DDX39A-220ENST00000593008 SPICQ8N5J4 248 aa7.97□□□□□ -1.13
DDX39A-220ENST00000593008 TEX29Q8N6K0 151 aa7.97□□□□□ -1.13
DDX39A-220ENST00000593008 CHST4Q8NCG5 386 aa7.97□□□□□ -1.13
DDX39A-220ENST00000593008 MAFIPQ8WZ33 124 aa7.97□□□□□ -1.13
DDX39A-220ENST00000593008 RAB39BQ96DA2 213 aa7.97□□□□□ -1.13
DDX39A-220ENST00000593008 NEIL1Q96FI4 390 aaPredicted RBP7.97□□□□□ -1.13
DDX39A-220ENST00000593008 MDFIQ99750 246 aa7.97□□□□□ -1.13
DDX39A-220ENST00000593008 FAAP24Q9BTP7 215 aa7.97□□□□□ -1.13
DDX39A-220ENST00000593008 PECRQ9BY49 303 aa7.97□□□□□ -1.13
DDX39A-220ENST00000593008 MMP26Q9NRE1 261 aa7.97□□□□□ -1.13
DDX39A-220ENST00000593008 NDUFA13Q9P0J0 144 aa7.97□□□□□ -1.13
DDX39A-220ENST00000593008 GHRLQ9UBU3 117 aa7.97□□□□□ -1.13
DDX39A-220ENST00000593008 SLC25A10Q9UBX3 287 aaPredicted RBP7.97□□□□□ -1.13
DDX39A-220ENST00000593008 LPAR3Q9UBY5 353 aa7.97□□□□□ -1.13
DDX39A-220ENST00000593008 AK3Q9UIJ7 227 aa7.97□□□□□ -1.13
DDX39A-220ENST00000593008 RAB22AQ9UL26 194 aa7.97□□□□□ -1.13
DDX39A-220ENST00000593008 PCDHB10Q9UN67 800 aa7.97□□□□□ -1.13
DDX39A-220ENST00000593008 PEX16Q9Y5Y5 336 aa7.97□□□□□ -1.13
DDX39A-220ENST00000593008 ETV7Q9Y603 341 aa7.97□□□□□ -1.13
DDX39A-220ENST00000593008 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP7.97□□□□□ -1.137e-7■■■■□ 25.8
DDX39A-220ENST00000593008 TRAV18A0A075B6X5 111 aa7.96□□□□□ -1.14
DDX39A-220ENST00000593008 MEIS3P1A6NDR6 274 aa7.96□□□□□ -1.14
DDX39A-220ENST00000593008 TMEM235A6NFC5 223 aa7.96□□□□□ -1.14
DDX39A-220ENST00000593008 MFNGO00587 321 aa7.96□□□□□ -1.14
DDX39A-220ENST00000593008 SH2D1BO14796 132 aa7.96□□□□□ -1.14
DDX39A-220ENST00000593008 RGS5O15539 181 aa7.96□□□□□ -1.14
DDX39A-220ENST00000593008 SSX5O60225 188 aa7.96□□□□□ -1.14
DDX39A-220ENST00000593008 PDCD6O75340 191 aa7.96□□□□□ -1.14
DDX39A-220ENST00000593008 IFNA2P01563 188 aa7.96□□□□□ -1.14
DDX39A-220ENST00000593008 SOX6P35712 828 aa7.96□□□□□ -1.14
DDX39A-220ENST00000593008 SRP14P37108 136 aaKnown RBP7.96□□□□□ -1.14
DDX39A-220ENST00000593008 GLIPR1P48060 266 aa7.96□□□□□ -1.14
DDX39A-220ENST00000593008 TAS2R20P59543 309 aa7.96□□□□□ -1.14
DDX39A-220ENST00000593008 GPR176Q14439 515 aa7.96□□□□□ -1.14
DDX39A-220ENST00000593008 RSBN1Q5VWQ0 802 aaPredicted RBP7.96□□□□□ -1.14
DDX39A-220ENST00000593008 FIP1L1Q6UN15 594 aaKnown RBP7.96□□□□□ -1.14
DDX39A-220ENST00000593008 BAIAP2L2Q6UXY1 529 aa7.96□□□□□ -1.14
DDX39A-220ENST00000593008 OR8B3Q8NGG8 313 aa7.96□□□□□ -1.14
DDX39A-220ENST00000593008 OR10R2Q8NGX6 335 aa7.96□□□□□ -1.14
DDX39A-220ENST00000593008 NEK7Q8TDX7 302 aa7.96□□□□□ -1.14
DDX39A-220ENST00000593008 CCDC107Q8WV48 283 aa7.96□□□□□ -1.14
DDX39A-220ENST00000593008 NUDCD2Q8WVJ2 157 aa7.96□□□□□ -1.14
DDX39A-220ENST00000593008 H1FXQ92522 213 aaKnown RBP7.96□□□□□ -1.14
DDX39A-220ENST00000593008 KCTD12Q96CX2 325 aaKnown RBP7.96□□□□□ -1.14
DDX39A-220ENST00000593008 OR8B2Q96RD0 313 aa7.96□□□□□ -1.14
DDX39A-220ENST00000593008 RHOFQ9HBH0 211 aa7.96□□□□□ -1.14
DDX39A-220ENST00000593008 BATF3Q9NR55 127 aa7.96□□□□□ -1.14
DDX39A-220ENST00000593008 EXTL2Q9UBQ6 330 aa7.96□□□□□ -1.14
DDX39A-220ENST00000593008 GLS2Q9UI32 602 aa7.96□□□□□ -1.14
DDX39A-220ENST00000593008 KIF25Q9UIL4 384 aa7.96□□□□□ -1.14
DDX39A-220ENST00000593008 MXRA5Q9NR99 2828 aa7.96□□□□□ -1.14
DDX39A-220ENST00000593008 TRAV20A0A0B4J274 112 aa7.95□□□□□ -1.14
DDX39A-220ENST00000593008 MEIOCA2RUB1 952 aa7.95□□□□□ -1.14
DDX39A-220ENST00000593008 FAM25AB3EWG3 89 aa7.95□□□□□ -1.14
DDX39A-220ENST00000593008 FAM25CB3EWG5 89 aa7.95□□□□□ -1.14
DDX39A-220ENST00000593008 FAM25GB3EWG6 89 aa7.95□□□□□ -1.14
DDX39A-220ENST00000593008 K7N7A8 449 aa7.95□□□□□ -1.14
DDX39A-220ENST00000593008 NDUFB3O43676 98 aa7.95□□□□□ -1.14
DDX39A-220ENST00000593008 CLPXO76031 633 aa7.95□□□□□ -1.14
DDX39A-220ENST00000593008 CHRM2P08172 466 aa7.95□□□□□ -1.14
DDX39A-220ENST00000593008 HIST1H1DP16402 221 aaKnown RBP7.95□□□□□ -1.14
DDX39A-220ENST00000593008 CCL3L1P16619 93 aa7.95□□□□□ -1.14
DDX39A-220ENST00000593008 LMO1P25800 156 aa7.95□□□□□ -1.14
DDX39A-220ENST00000593008 GDNFP39905 211 aa7.95□□□□□ -1.14
DDX39A-220ENST00000593008 EDDM3BP56851 147 aa7.95□□□□□ -1.14
DDX39A-220ENST00000593008 MPV17LQ2QL34 196 aa7.95□□□□□ -1.14
DDX39A-220ENST00000593008 C11orf91Q3C1V1 193 aa7.95□□□□□ -1.14
DDX39A-220ENST00000593008 BTN2A1Q7KYR7 527 aa7.95□□□□□ -1.14
DDX39A-220ENST00000593008 SNX29P2Q8IUI4 249 aa7.95□□□□□ -1.14
DDX39A-220ENST00000593008 CROCCP3Q8IVE0 287 aa7.95□□□□□ -1.14
DDX39A-220ENST00000593008 FAM185AQ8N0U4 392 aa7.95□□□□□ -1.14
DDX39A-220ENST00000593008 OR8H2Q8N162 312 aa7.95□□□□□ -1.14
DDX39A-220ENST00000593008 ZNF561Q8N587 486 aa7.95□□□□□ -1.14
DDX39A-220ENST00000593008 OR56B1Q8NGI3 324 aa7.95□□□□□ -1.14
DDX39A-220ENST00000593008 OR6Q1Q8NGQ2 317 aa7.95□□□□□ -1.14
DDX39A-220ENST00000593008 OR13A1Q8NGR1 328 aa7.95□□□□□ -1.14
DDX39A-220ENST00000593008 OR4K15Q8NH41 348 aa7.95□□□□□ -1.14
DDX39A-220ENST00000593008 MRPL30Q8TCC3 161 aaKnown RBP7.95□□□□□ -1.14
DDX39A-220ENST00000593008 AP3S1Q92572 193 aa7.95□□□□□ -1.14
DDX39A-220ENST00000593008 RAB3CQ96E17 227 aa7.95□□□□□ -1.14
DDX39A-220ENST00000593008 MRPS24Q96EL2 167 aaKnown RBP7.95□□□□□ -1.14
DDX39A-220ENST00000593008 URM1Q9BTM9 101 aaKnown RBP7.95□□□□□ -1.14
DDX39A-220ENST00000593008 SSBP3Q9BWW4 388 aaPredicted RBP7.95□□□□□ -1.14
DDX39A-220ENST00000593008 AUNIPQ9H7T9 357 aa7.95□□□□□ -1.14
DDX39A-220ENST00000593008 IFT22Q9H7X7 185 aa7.95□□□□□ -1.14
DDX39A-220ENST00000593008 KAAG1Q9UBP8 84 aa7.95□□□□□ -1.14
DDX39A-220ENST00000593008 CLN8Q9UBY8 286 aa7.95□□□□□ -1.14
DDX39A-220ENST00000593008 ZNF230Q9UIE0 474 aaPredicted RBP7.95□□□□□ -1.14
DDX39A-220ENST00000593008 V9GYH0 126 aa7.95□□□□□ -1.14
DDX39A-220ENST00000593008 LOC105371242A0A075B767 164 aa7.94□□□□□ -1.14
DDX39A-220ENST00000593008 IGKV1D-8A0A087WSZ0 117 aa7.94□□□□□ -1.14
Retrieved 100 of 20,778 RNA–protein pairs in 52.3 ms