RNA–Protein interactions for RNA: ENST00000592815.5

CIRBP-240, Transcript of cold inducible RNA binding protein, human

TSL 4

Gene CIRBP, Length 334 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

Download Table

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
CIRBP-240	ENST00000592815	ZNF565	Q8N9K5	539 aa		12.86	□□□□□ -0.35
CIRBP-240	ENST00000592815	TNFAIP8L1	Q8WVP5	186 aa		12.86	□□□□□ -0.35
CIRBP-240	ENST00000592815	CREB3L1	Q96BA8	519 aa		12.86	□□□□□ -0.35
CIRBP-240	ENST00000592815	MRPS18A	Q9NVS2	196 aa	Known RBP	12.86	□□□□□ -0.35
CIRBP-240	ENST00000592815	PLXNB1	O43157	2135 aa		12.85	□□□□□ -0.35
CIRBP-240	ENST00000592815	TRAV24	A0A0B4J272	114 aa		12.85	□□□□□ -0.35
CIRBP-240	ENST00000592815		A0A1W2PRX2	142 aa		12.85	□□□□□ -0.35
CIRBP-240	ENST00000592815	LY6L	H3BQJ8	138 aa		12.85	□□□□□ -0.35
CIRBP-240	ENST00000592815	LIMS3	P0CW19	117 aa		12.85	□□□□□ -0.35
CIRBP-240	ENST00000592815	LIMS4	P0CW20	117 aa		12.85	□□□□□ -0.35
CIRBP-240	ENST00000592815	CD83	Q01151	205 aa		12.85	□□□□□ -0.35
CIRBP-240	ENST00000592815	HLA-DRB5	Q30154	266 aa		12.85	□□□□□ -0.35
CIRBP-240	ENST00000592815	ABCA11P	Q4W5N1	156 aa		12.85	□□□□□ -0.35
CIRBP-240	ENST00000592815	FBLN7	Q53RD9	439 aa		12.85	□□□□□ -0.35
CIRBP-240	ENST00000592815	PQLC1	Q8N2U9	271 aa		12.85	□□□□□ -0.35
CIRBP-240	ENST00000592815	PXT1	Q8NFP0	134 aa		12.85	□□□□□ -0.35
CIRBP-240	ENST00000592815	OR51A2	Q8NGJ7	313 aa		12.85	□□□□□ -0.35
CIRBP-240	ENST00000592815	OR51T1	Q8NGJ9	327 aa		12.85	□□□□□ -0.35
CIRBP-240	ENST00000592815	CNIH3	Q8TBE1	160 aa		12.85	□□□□□ -0.35
CIRBP-240	ENST00000592815	APH1B	Q8WW43	257 aa		12.85	□□□□□ -0.35
CIRBP-240	ENST00000592815	RBM14	Q96PK6	669 aa	Known RBP	12.85	□□□□□ -0.35
CIRBP-240	ENST00000592815	SLC25A33	Q9BSK2	321 aa		12.85	□□□□□ -0.35
CIRBP-240	ENST00000592815	TAS2R4	Q9NYW5	299 aa		12.85	□□□□□ -0.35
CIRBP-240	ENST00000592815	KIF25	Q9UIL4	384 aa		12.85	□□□□□ -0.35
CIRBP-240	ENST00000592815	MEIKIN	A0A087WXM9	373 aa		12.84	□□□□□ -0.35
CIRBP-240	ENST00000592815		A0A087X0M5	115 aa		12.84	□□□□□ -0.35
CIRBP-240	ENST00000592815		A0A1B0GX30	115 aa		12.84	□□□□□ -0.35
CIRBP-240	ENST00000592815	SH2D7	A6NKC9	451 aa	Predicted RBP	12.84	□□□□□ -0.35
CIRBP-240	ENST00000592815	GABRP	O00591	440 aa		12.84	□□□□□ -0.35
CIRBP-240	ENST00000592815	OR2F2	O95006	317 aa		12.84	□□□□□ -0.35
CIRBP-240	ENST00000592815	LPL	P06858	475 aa		12.84	□□□□□ -0.35
CIRBP-240	ENST00000592815	CGB3	P0DN86	165 aa		12.84	□□□□□ -0.35
CIRBP-240	ENST00000592815	CGB7	P0DN87	165 aa		12.84	□□□□□ -0.35
CIRBP-240	ENST00000592815	C21orf33	P30042	268 aa	Predicted RBP	12.84	□□□□□ -0.35
CIRBP-240	ENST00000592815	MNDA	P41218	407 aa		12.84	□□□□□ -0.35
CIRBP-240	ENST00000592815	GLP1R	P43220	463 aa		12.84	□□□□□ -0.35
CIRBP-240	ENST00000592815	RSU1	Q15404	277 aa		12.84	□□□□□ -0.35
CIRBP-240	ENST00000592815	SMN1	Q16637	294 aa	Known RBP	12.84	□□□□□ -0.35
CIRBP-240	ENST00000592815	ZNF529	Q6P280	563 aa		12.84	□□□□□ -0.35
CIRBP-240	ENST00000592815	OR13A1	Q8NGR1	328 aa		12.84	□□□□□ -0.35
CIRBP-240	ENST00000592815	OR10K1	Q8NGX5	313 aa		12.84	□□□□□ -0.35
CIRBP-240	ENST00000592815	OR9G1	Q8NH87	305 aa		12.84	□□□□□ -0.35
CIRBP-240	ENST00000592815	HAVCR2	Q8TDQ0	301 aa		12.84	□□□□□ -0.35
CIRBP-240	ENST00000592815	RGP1	Q92546	391 aa	Predicted RBP	12.84	□□□□□ -0.35
CIRBP-240	ENST00000592815	CPNE2	Q96FN4	548 aa	Predicted RBP	12.84	□□□□□ -0.35
CIRBP-240	ENST00000592815	KIRREL1	Q96J84	757 aa		12.84	□□□□□ -0.35
CIRBP-240	ENST00000592815	JAM3	Q9BX67	310 aa		12.84	□□□□□ -0.35
CIRBP-240	ENST00000592815	BARHL1	Q9BZE3	327 aa		12.84	□□□□□ -0.35
CIRBP-240	ENST00000592815	FAM192A	Q9GZU8	254 aa		12.84	□□□□□ -0.35
CIRBP-240	ENST00000592815	FGF20	Q9NP95	211 aa	Predicted RBP	12.84	□□□□□ -0.35
CIRBP-240	ENST00000592815	TCRBV4S1A1T	A0A5B7	111 aa		12.83	□□□□□ -0.36
CIRBP-240	ENST00000592815	HTR3B	O95264	441 aa		12.83	□□□□□ -0.36
CIRBP-240	ENST00000592815	BAG2	O95816	211 aa		12.83	□□□□□ -0.36
CIRBP-240	ENST00000592815	IGHV3-7	P01780	117 aa		12.83	□□□□□ -0.36
CIRBP-240	ENST00000592815	ETV1	P50549	477 aa		12.83	□□□□□ -0.36
CIRBP-240	ENST00000592815	PIGY	Q3MUY2	71 aa		12.83	□□□□□ -0.36
CIRBP-240	ENST00000592815	CCDC144NL	Q6NUI1	221 aa		12.83	□□□□□ -0.36
CIRBP-240	ENST00000592815	RPL22L1	Q6P5R6	122 aa	Known RBP	12.83	□□□□□ -0.36
CIRBP-240	ENST00000592815	ZNF555	Q8NEP9	628 aa		12.83	□□□□□ -0.36
CIRBP-240	ENST00000592815	RFESD	Q8TAC1	157 aa		12.83	□□□□□ -0.36
CIRBP-240	ENST00000592815	GPR148	Q8TDV2	347 aa		12.83	□□□□□ -0.36
CIRBP-240	ENST00000592815	SGCD	Q92629	289 aa		12.83	□□□□□ -0.36
CIRBP-240	ENST00000592815	LEAP2	Q969E1	77 aa		12.83	□□□□□ -0.36
CIRBP-240	ENST00000592815	NCOR1P1	Q9H4R4	102 aa		12.83	□□□□□ -0.36
CIRBP-240	ENST00000592815	CALY	Q9NYX4	217 aa		12.83	□□□□□ -0.36
CIRBP-240	ENST00000592815	ZKSCAN7	Q9P0L1	754 aa	Predicted RBP	12.83	□□□□□ -0.36
CIRBP-240	ENST00000592815	ING4	Q9UNL4	249 aa		12.83	□□□□□ -0.36
CIRBP-240	ENST00000592815	OOSP1	A8MZH6	123 aa		12.82	□□□□□ -0.36
CIRBP-240	ENST00000592815		J3QR06	171 aa		12.82	□□□□□ -0.36
CIRBP-240	ENST00000592815	WBP4	O75554	376 aa	Known RBP	12.82	□□□□□ -0.36
CIRBP-240	ENST00000592815	CDRT1	O95170	752 aa		12.82	□□□□□ -0.36
CIRBP-240	ENST00000592815	AMY1A	P04745	511 aa		12.82	□□□□□ -0.36
CIRBP-240	ENST00000592815	AMY2A	P04746	511 aa		12.82	□□□□□ -0.36
CIRBP-240	ENST00000592815	CD2	P06729	351 aa		12.82	□□□□□ -0.36
CIRBP-240	ENST00000592815	FAM106CP	P0CH98	169 aa		12.82	□□□□□ -0.36
CIRBP-240	ENST00000592815	IL13RA2	Q14627	380 aa		12.82	□□□□□ -0.36
CIRBP-240	ENST00000592815	LTC4S	Q16873	150 aa		12.82	□□□□□ -0.36
CIRBP-240	ENST00000592815	CCDC58	Q4VC31	144 aa		12.82	□□□□□ -0.36
CIRBP-240	ENST00000592815	TCTEX1D4	Q5JR98	221 aa		12.82	□□□□□ -0.36
CIRBP-240	ENST00000592815	C9orf152	Q5JTZ5	239 aa		12.82	□□□□□ -0.36
CIRBP-240	ENST00000592815	XAF1	Q6GPH4	301 aa		12.82	□□□□□ -0.36
CIRBP-240	ENST00000592815	ASCL4	Q6XD76	172 aa		12.82	□□□□□ -0.36
CIRBP-240	ENST00000592815	TMPRSS11A	Q6ZMR5	421 aa		12.82	□□□□□ -0.36
CIRBP-240	ENST00000592815	REC114	Q7Z4M0	266 aa		12.82	□□□□□ -0.36
CIRBP-240	ENST00000592815		Q8NFD4	153 aa		12.82	□□□□□ -0.36
CIRBP-240	ENST00000592815	PLPPR1	Q8TBJ4	325 aa		12.82	□□□□□ -0.36
CIRBP-240	ENST00000592815	MRGPRD	Q8TDS7	321 aa		12.82	□□□□□ -0.36
CIRBP-240	ENST00000592815	RPE	Q96AT9	228 aa		12.82	□□□□□ -0.36
CIRBP-240	ENST00000592815	IDI2-AS1	Q9NZ38	188 aa		12.82	□□□□□ -0.36
CIRBP-240	ENST00000592815	TRAV39	A0A0B4J263	110 aa		12.81	□□□□□ -0.36
CIRBP-240	ENST00000592815	IL1A	P01583	271 aa		12.81	□□□□□ -0.36
CIRBP-240	ENST00000592815	PF4V1	P10720	104 aa		12.81	□□□□□ -0.36
CIRBP-240	ENST00000592815	DCK	P27707	260 aa		12.81	□□□□□ -0.36
CIRBP-240	ENST00000592815	OR2G6	Q5TZ20	316 aa		12.81	□□□□□ -0.36
CIRBP-240	ENST00000592815	RSBN1	Q5VWQ0	802 aa	Predicted RBP	12.81	□□□□□ -0.36
CIRBP-240	ENST00000592815		Q6ZPA2	131 aa		12.81	□□□□□ -0.36
CIRBP-240	ENST00000592815	MYDGF	Q969H8	173 aa		12.81	□□□□□ -0.36
CIRBP-240	ENST00000592815	TOMM40L	Q969M1	308 aa		12.81	□□□□□ -0.36
CIRBP-240	ENST00000592815	TMEM106A	Q96A25	262 aa		12.81	□□□□□ -0.36
CIRBP-240	ENST00000592815	LINC00574	Q9H8X3	128 aa		12.81	□□□□□ -0.36

Retrieved 100 of 20,778 RNA–protein pairs in 43.4 ms