RNA–Protein interactions for RNA: ENST00000592017.5

CLIP3-205, Transcript of CAP-Gly domain containing linker protein 3, humanhuman

TSL 5

Gene CLIP3, Length 704 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLIP3-205ENST00000592017 RBP4P02753 201 aa11.33□□□□□ -0.6
CLIP3-205ENST00000592017 ARG1P05089 322 aa11.33□□□□□ -0.6
CLIP3-205ENST00000592017 CSN2P05814 226 aa11.33□□□□□ -0.6
CLIP3-205ENST00000592017 GTF2F2P13984 249 aa11.33□□□□□ -0.6
CLIP3-205ENST00000592017 PAX6P26367 422 aa11.33□□□□□ -0.6
CLIP3-205ENST00000592017 ERP29P30040 261 aaKnown RBP11.33□□□□□ -0.6
CLIP3-205ENST00000592017 GLP1RP43220 463 aa11.33□□□□□ -0.6
CLIP3-205ENST00000592017 IER3P46695 156 aa11.33□□□□□ -0.6
CLIP3-205ENST00000592017 TBCEQ15813 527 aaPredicted RBP11.33□□□□□ -0.6
CLIP3-205ENST00000592017 MIDNQ504T8 468 aa11.33□□□□□ -0.6
CLIP3-205ENST00000592017 HSD17B12Q53GQ0 312 aa11.33□□□□□ -0.6
CLIP3-205ENST00000592017 ATAD3CQ5T2N8 411 aa11.33□□□□□ -0.6
CLIP3-205ENST00000592017 ZNF367Q7RTV3 350 aa11.33□□□□□ -0.6
CLIP3-205ENST00000592017 OR4D6Q8NGJ1 314 aa11.33□□□□□ -0.6
CLIP3-205ENST00000592017 MGLLQ99685 303 aa11.33□□□□□ -0.6
CLIP3-205ENST00000592017 DPAGT1Q9H3H5 408 aa11.33□□□□□ -0.6
CLIP3-205ENST00000592017 GAL3ST2Q9H3Q3 398 aa11.33□□□□□ -0.6
CLIP3-205ENST00000592017 PCDHB16Q9NRJ7 776 aa11.33□□□□□ -0.6
CLIP3-205ENST00000592017 UBE2J1Q9Y385 318 aaPredicted RBP11.33□□□□□ -0.6
CLIP3-205ENST00000592017 MMP24Q9Y5R2 645 aa11.33□□□□□ -0.6
CLIP3-205ENST00000592017 POMT1Q9Y6A1 747 aa11.33□□□□□ -0.6
CLIP3-205ENST00000592017 SESN1Q9Y6P5 492 aa11.33□□□□□ -0.6
CLIP3-205ENST00000592017 MEIKINA0A087WXM9 373 aa11.32□□□□□ -0.6
CLIP3-205ENST00000592017 FAM172BPA6NC97 362 aa11.32□□□□□ -0.6
CLIP3-205ENST00000592017 NDUFA7O95182 113 aa11.32□□□□□ -0.6
CLIP3-205ENST00000592017 CRYBA1P05813 215 aa11.32□□□□□ -0.6
CLIP3-205ENST00000592017 CPEP16870 476 aa11.32□□□□□ -0.6
CLIP3-205ENST00000592017 RAG2P55895 527 aa11.32□□□□□ -0.6
CLIP3-205ENST00000592017 GPR50Q13585 617 aa11.32□□□□□ -0.6
CLIP3-205ENST00000592017 TPBGQ13641 420 aa11.32□□□□□ -0.6
CLIP3-205ENST00000592017 GPR176Q14439 515 aa11.32□□□□□ -0.6
CLIP3-205ENST00000592017 PRR31Q5SQ13 230 aa11.32□□□□□ -0.6
CLIP3-205ENST00000592017 UNQ9370/PRO34162Q6UXP9 181 aa11.32□□□□□ -0.6
CLIP3-205ENST00000592017 Q8NFD4 153 aa11.32□□□□□ -0.6
CLIP3-205ENST00000592017 NEK7Q8TDX7 302 aa11.32□□□□□ -0.6
CLIP3-205ENST00000592017 DPCDQ9BVM2 203 aaPredicted RBP11.32□□□□□ -0.6
CLIP3-205ENST00000592017 SLITRK2Q9H156 845 aa11.32□□□□□ -0.6
CLIP3-205ENST00000592017 BANF2Q9H503 90 aa11.32□□□□□ -0.6
CLIP3-205ENST00000592017 ISYNA1Q9NPH2 558 aa11.32□□□□□ -0.6
CLIP3-205ENST00000592017 MEGF11A6BM72 1044 aa11.31□□□□□ -0.6
CLIP3-205ENST00000592017 DENRO43583 198 aaKnown RBP11.31□□□□□ -0.6
CLIP3-205ENST00000592017 GPR137BO60478 399 aa11.31□□□□□ -0.6
CLIP3-205ENST00000592017 CRTAPO75718 401 aaPredicted RBP11.31□□□□□ -0.6
CLIP3-205ENST00000592017 MMP23AO75900 390 aa11.31□□□□□ -0.6
CLIP3-205ENST00000592017 CDK2P24941 298 aa11.31□□□□□ -0.6
CLIP3-205ENST00000592017 GP2P55259 537 aaKnown RBP11.31□□□□□ -0.6
CLIP3-205ENST00000592017 GABARAPL2P60520 117 aa11.31□□□□□ -0.6
CLIP3-205ENST00000592017 SRSF4Q08170 494 aaKnown RBP11.31□□□□□ -0.6
CLIP3-205ENST00000592017 TAF9Q16594 264 aa11.31□□□□□ -0.6
CLIP3-205ENST00000592017 MPV17LQ2QL34 196 aa11.31□□□□□ -0.6
CLIP3-205ENST00000592017 PLA1AQ53H76 456 aa11.31□□□□□ -0.6
CLIP3-205ENST00000592017 NHLRC3Q5JS37 347 aa11.31□□□□□ -0.6
CLIP3-205ENST00000592017 GLT8D1Q68CQ7 371 aa11.31□□□□□ -0.6
CLIP3-205ENST00000592017 BAIAP2L2Q6UXY1 529 aa11.31□□□□□ -0.6
CLIP3-205ENST00000592017 LHFPL4Q7Z7J7 247 aa11.31□□□□□ -0.6
CLIP3-205ENST00000592017 LINC00596Q86U02 117 aa11.31□□□□□ -0.6
CLIP3-205ENST00000592017 LRRTM1Q86UE6 522 aa11.31□□□□□ -0.6
CLIP3-205ENST00000592017 CDH26Q8IXH8 852 aa11.31□□□□□ -0.6
CLIP3-205ENST00000592017 SUMF2Q8NBJ7 301 aa11.31□□□□□ -0.6
CLIP3-205ENST00000592017 OR4F5Q8NH21 305 aa11.31□□□□□ -0.6
CLIP3-205ENST00000592017 PLPPR1Q8TBJ4 325 aa11.31□□□□□ -0.6
CLIP3-205ENST00000592017 DYRK2Q92630 601 aa11.31□□□□□ -0.6
CLIP3-205ENST00000592017 FAM46BQ96A09 425 aa11.31□□□□□ -0.6
CLIP3-205ENST00000592017 UQCC2Q9BRT2 126 aa11.31□□□□□ -0.6
CLIP3-205ENST00000592017 ZNF696Q9H7X3 374 aa11.31□□□□□ -0.6
CLIP3-205ENST00000592017 ACOT13Q9NPJ3 140 aa11.31□□□□□ -0.6
CLIP3-205ENST00000592017 OR6C3Q9NZP0 311 aa11.31□□□□□ -0.6
CLIP3-205ENST00000592017 KIF25Q9UIL4 384 aa11.31□□□□□ -0.6
CLIP3-205ENST00000592017 CMYA5Q8N3K9 4069 aa11.3□□□□□ -0.6
CLIP3-205ENST00000592017 IGHV2-26A0A0B4J1V2 119 aa11.3□□□□□ -0.6
CLIP3-205ENST00000592017 H3BUX3 64 aa11.3□□□□□ -0.6
CLIP3-205ENST00000592017 SC5DO75845 299 aa11.3□□□□□ -0.6
CLIP3-205ENST00000592017 UCHL1P09936 223 aa11.3□□□□□ -0.6
CLIP3-205ENST00000592017 MGMTP16455 207 aa11.3□□□□□ -0.6
CLIP3-205ENST00000592017 PSMA1P25786 263 aaKnown RBP11.3□□□□□ -0.6
CLIP3-205ENST00000592017 TRAM1Q15629 374 aa11.3□□□□□ -0.6
CLIP3-205ENST00000592017 RSBN1Q5VWQ0 802 aaPredicted RBP11.3□□□□□ -0.6
CLIP3-205ENST00000592017 BRICD5Q6PL45 260 aa11.3□□□□□ -0.6
CLIP3-205ENST00000592017 TMEM91Q6ZNR0 172 aa11.3□□□□□ -0.6
CLIP3-205ENST00000592017 SVOPQ8N4V2 548 aa11.3□□□□□ -0.6
CLIP3-205ENST00000592017 BEND2Q8NDZ0 799 aa11.3□□□□□ -0.6
CLIP3-205ENST00000592017 OR13A1Q8NGR1 328 aa11.3□□□□□ -0.6
CLIP3-205ENST00000592017 NDNFQ8TB73 568 aa11.3□□□□□ -0.6
CLIP3-205ENST00000592017 MRGPRDQ8TDS7 321 aa11.3□□□□□ -0.6
CLIP3-205ENST00000592017 PHYHIPQ92561 330 aa11.3□□□□□ -0.6
CLIP3-205ENST00000592017 AJUBAQ96IF1 538 aa11.3□□□□□ -0.6
CLIP3-205ENST00000592017 CLEC7AQ9BXN2 247 aa11.3□□□□□ -0.6
CLIP3-205ENST00000592017 BARHL1Q9BZE3 327 aa11.3□□□□□ -0.6
CLIP3-205ENST00000592017 SELENOIQ9C0D9 397 aa11.3□□□□□ -0.6
CLIP3-205ENST00000592017 TMEM133Q9H2Q1 129 aa11.3□□□□□ -0.6
CLIP3-205ENST00000592017 BEX1Q9HBH7 125 aa11.3□□□□□ -0.6
CLIP3-205ENST00000592017 TAS2R3Q9NYW6 316 aa11.3□□□□□ -0.6
CLIP3-205ENST00000592017 VPREB3Q9UKI3 123 aa11.3□□□□□ -0.6
CLIP3-205ENST00000592017 TRAV39A0A0B4J263 110 aa11.29□□□□□ -0.6
CLIP3-205ENST00000592017 CLPSL1A2RUU4 121 aa11.29□□□□□ -0.6
CLIP3-205ENST00000592017 ODF3BA8MYP8 253 aa11.29□□□□□ -0.6
CLIP3-205ENST00000592017 SRMP19623 302 aa11.29□□□□□ -0.6
CLIP3-205ENST00000592017 NFYBP25208 207 aa11.29□□□□□ -0.6
CLIP3-205ENST00000592017 CALRP27797 417 aaKnown RBP11.29□□□□□ -0.6
CLIP3-205ENST00000592017 GABRA5P31644 462 aa11.29□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 46.7 ms