RNA–Protein interactions for RNA: ENST00000590704.5

CIRBP-229, Transcript of cold inducible RNA binding protein, humanhuman

TSL 2

Gene CIRBP, Length 1,456 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CIRBP-229ENST00000590704 EFNB2P52799 333 aa17.24■□□□□ 0.35
CIRBP-229ENST00000590704 TMEM50BP56557 158 aa17.24■□□□□ 0.35
CIRBP-229ENST00000590704 EDDM3BP56851 147 aa17.24■□□□□ 0.35
CIRBP-229ENST00000590704 ATXN7L3Q14CW9 347 aaPredicted RBP17.24■□□□□ 0.35
CIRBP-229ENST00000590704 RAB11BQ15907 218 aa17.24■□□□□ 0.35
CIRBP-229ENST00000590704 GDPD3Q7L5L3 318 aa17.24■□□□□ 0.35
CIRBP-229ENST00000590704 VMO1Q7Z5L0 202 aa17.24■□□□□ 0.35
CIRBP-229ENST00000590704 FAM185AQ8N0U4 392 aa17.24■□□□□ 0.35
CIRBP-229ENST00000590704 PCGF1Q9BSM1 259 aa17.24■□□□□ 0.35
CIRBP-229ENST00000590704 DPCDQ9BVM2 203 aaPredicted RBP17.24■□□□□ 0.35
CIRBP-229ENST00000590704 PLGRKTQ9HBL7 147 aa17.24■□□□□ 0.35
CIRBP-229ENST00000590704 VCX3AQ9NNX9 186 aa17.24■□□□□ 0.35
CIRBP-229ENST00000590704 PCDHB16Q9NRJ7 776 aa17.24■□□□□ 0.35
CIRBP-229ENST00000590704 ZNF69Q9UC07 566 aa17.24■□□□□ 0.35
CIRBP-229ENST00000590704 IGHV3OR16-10A0A075B7F0 116 aa17.24■□□□□ 0.35
CIRBP-229ENST00000590704 TMEM272A0A1B0GTI8 110 aa17.24■□□□□ 0.35
CIRBP-229ENST00000590704 FAM90A10PA6NDY2 464 aa17.24■□□□□ 0.35
CIRBP-229ENST00000590704 FAM90A18PA6NE21 464 aa17.24■□□□□ 0.35
CIRBP-229ENST00000590704 FAM90A16PA6NEW6 464 aa17.24■□□□□ 0.35
CIRBP-229ENST00000590704 FAM90A20PA6NIJ5 464 aa17.24■□□□□ 0.35
CIRBP-229ENST00000590704 FAM90A8PA6NJQ4 464 aa17.24■□□□□ 0.35
CIRBP-229ENST00000590704 FAM90A7PA6NKC0 464 aa17.24■□□□□ 0.35
CIRBP-229ENST00000590704 FAM90A22PA8MWA6 464 aa17.24■□□□□ 0.35
CIRBP-229ENST00000590704 FAM90A12PA8MX19 464 aa17.24■□□□□ 0.35
CIRBP-229ENST00000590704 FAM90A5PA8MXJ8 464 aa17.24■□□□□ 0.35
CIRBP-229ENST00000590704 FAM90A23PA8MXZ1 464 aa17.24■□□□□ 0.35
CIRBP-229ENST00000590704 RNASEK-C17orf49H0YIS7 233 aa17.24■□□□□ 0.35
CIRBP-229ENST00000590704 PDCD5O14737 125 aa17.24■□□□□ 0.35
CIRBP-229ENST00000590704 AIREO43918 545 aa17.24■□□□□ 0.35
CIRBP-229ENST00000590704 MMP23AO75900 390 aa17.24■□□□□ 0.35
CIRBP-229ENST00000590704 FAM90A15PP0C7V4 464 aa17.24■□□□□ 0.35
CIRBP-229ENST00000590704 FAM90A13PP0C7W8 464 aa17.24■□□□□ 0.35
CIRBP-229ENST00000590704 FAM90A14PP0C7W9 464 aa17.24■□□□□ 0.35
CIRBP-229ENST00000590704 FAM90A24PP0C7X0 464 aa17.24■□□□□ 0.35
CIRBP-229ENST00000590704 ARSBP15848 533 aa17.24■□□□□ 0.35
CIRBP-229ENST00000590704 MEF2CQ06413 473 aaPredicted RBP17.24■□□□□ 0.35
CIRBP-229ENST00000590704 GAPTQ8N292 157 aa17.24■□□□□ 0.35
CIRBP-229ENST00000590704 KCNG3Q8TAE7 436 aa17.24■□□□□ 0.35
CIRBP-229ENST00000590704 NANPQ8TBE9 248 aa17.24■□□□□ 0.35
CIRBP-229ENST00000590704 SIRT7Q9NRC8 400 aa17.24■□□□□ 0.35
CIRBP-229ENST00000590704 ONECUT1Q9UBC0 465 aa17.24■□□□□ 0.35
CIRBP-229ENST00000590704 A0A1W2PQ09 198 aa17.23■□□□□ 0.35
CIRBP-229ENST00000590704 NOTOA8MTQ0 251 aa17.23■□□□□ 0.35
CIRBP-229ENST00000590704 SRD5A1P18405 259 aa17.23■□□□□ 0.35
CIRBP-229ENST00000590704 PRTN3P24158 256 aa17.23■□□□□ 0.35
CIRBP-229ENST00000590704 CHATP28329 748 aa17.23■□□□□ 0.35
CIRBP-229ENST00000590704 LSM3P62310 102 aaKnown RBP17.23■□□□□ 0.35
CIRBP-229ENST00000590704 CTF1Q16619 201 aa17.23■□□□□ 0.35
CIRBP-229ENST00000590704 C17orf58Q2M2W7 97 aa17.23■□□□□ 0.35
CIRBP-229ENST00000590704 PAN3Q58A45 887 aaKnown RBP17.23■□□□□ 0.35
CIRBP-229ENST00000590704 UTF1Q5T230 341 aa17.23■□□□□ 0.35
CIRBP-229ENST00000590704 OR2W3Q7Z3T1 314 aa17.23■□□□□ 0.35
CIRBP-229ENST00000590704 NCOR1P1Q9H4R4 102 aa17.23■□□□□ 0.35
CIRBP-229ENST00000590704 LINC00312Q9Y6C7 94 aa17.23■□□□□ 0.35
CIRBP-229ENST00000590704 TRAV40A0A0B4J280 105 aa17.22■□□□□ 0.35
CIRBP-229ENST00000590704 ODAMA1E959 279 aa17.22■□□□□ 0.35
CIRBP-229ENST00000590704 SOCS1O15524 211 aa17.22■□□□□ 0.35
CIRBP-229ENST00000590704 RPS19P39019 145 aaKnown RBP17.22■□□□□ 0.35
CIRBP-229ENST00000590704 GDNFP39905 211 aa17.22■□□□□ 0.35
CIRBP-229ENST00000590704 MXD1Q05195 221 aa17.22■□□□□ 0.35
CIRBP-229ENST00000590704 KLRD1Q13241 179 aa17.22■□□□□ 0.35
CIRBP-229ENST00000590704 KRBOX4Q5JUW0 171 aa17.22■□□□□ 0.35
CIRBP-229ENST00000590704 METTL11BQ5VVY1 283 aa17.22■□□□□ 0.35
CIRBP-229ENST00000590704 BAIAP2L2Q6UXY1 529 aa17.22■□□□□ 0.35
CIRBP-229ENST00000590704 Q6ZPA2 131 aa17.22■□□□□ 0.35
CIRBP-229ENST00000590704 ANKRD13BQ86YJ7 626 aa17.22■□□□□ 0.35
CIRBP-229ENST00000590704 PIP4P2Q8N4L2 257 aa17.22■□□□□ 0.35
CIRBP-229ENST00000590704 PPP1R35Q8TAP8 253 aa17.22■□□□□ 0.35
CIRBP-229ENST00000590704 DYRK2Q92630 601 aa17.22■□□□□ 0.35
CIRBP-229ENST00000590704 AJUBAQ96IF1 538 aa17.22■□□□□ 0.35
CIRBP-229ENST00000590704 TMEM59Q9BXS4 323 aa17.22■□□□□ 0.35
CIRBP-229ENST00000590704 CST11Q9H112 138 aa17.22■□□□□ 0.35
CIRBP-229ENST00000590704 KIF25Q9UIL4 384 aa17.22■□□□□ 0.35
CIRBP-229ENST00000590704 NUP50Q9UKX7 468 aa17.22■□□□□ 0.35
CIRBP-229ENST00000590704 ZNF728P0DKX0 622 aa17.21■□□□□ 0.35
CIRBP-229ENST00000590704 HNF1AP20823 631 aa17.21■□□□□ 0.35
CIRBP-229ENST00000590704 NCS1P62166 190 aa17.21■□□□□ 0.35
CIRBP-229ENST00000590704 SFXN4Q6P4A7 337 aa17.21■□□□□ 0.35
CIRBP-229ENST00000590704 C9orf139Q6ZV77 190 aa17.21■□□□□ 0.35
CIRBP-229ENST00000590704 OR13A1Q8NGR1 328 aa17.21■□□□□ 0.35
CIRBP-229ENST00000590704 ZNF48Q96MX3 618 aaPredicted RBP17.21■□□□□ 0.35
CIRBP-229ENST00000590704 LIN7BQ9HAP6 207 aa17.21■□□□□ 0.35
CIRBP-229ENST00000590704 ING3Q9NXR8 418 aa17.21■□□□□ 0.35
CIRBP-229ENST00000590704 TRAV39A0A0B4J263 110 aa17.2■□□□□ 0.34
CIRBP-229ENST00000590704 MT-ND4P03905 459 aa17.2■□□□□ 0.34
CIRBP-229ENST00000590704 FUT3P21217 361 aa17.2■□□□□ 0.34
CIRBP-229ENST00000590704 ATAD3CQ5T2N8 411 aa17.2■□□□□ 0.34
CIRBP-229ENST00000590704 RUSC1-AS1Q66K80 236 aa17.2■□□□□ 0.34
CIRBP-229ENST00000590704 SLC35E4Q6ICL7 350 aa17.2■□□□□ 0.34
CIRBP-229ENST00000590704 RAB12Q6IQ22 244 aa17.2■□□□□ 0.34
CIRBP-229ENST00000590704 BRD3OSQ6XYD6 125 aa17.2■□□□□ 0.34
CIRBP-229ENST00000590704 ZNF497Q6ZNH5 498 aa17.2■□□□□ 0.34
CIRBP-229ENST00000590704 C22orf15Q8WYQ4 148 aa17.2■□□□□ 0.34
CIRBP-229ENST00000590704 LHX4Q969G2 390 aa17.2■□□□□ 0.34
CIRBP-229ENST00000590704 SULT4A1Q9BR01 284 aa17.2■□□□□ 0.34
CIRBP-229ENST00000590704 PEX16Q9Y5Y5 336 aa17.2■□□□□ 0.34
CIRBP-229ENST00000590704 hADV38S2A0JD32 116 aa17.19■□□□□ 0.34
CIRBP-229ENST00000590704 PDCD6O75340 191 aa17.19■□□□□ 0.34
CIRBP-229ENST00000590704 GABARAPO95166 117 aa17.19■□□□□ 0.34
CIRBP-229ENST00000590704 PAHP00439 452 aa17.19■□□□□ 0.34
Retrieved 100 of 20,778 RNA–protein pairs in 30.3 ms