RNA–Protein interactions for RNA: ENST00000589076.5

SMAD4-207, Transcript of SMAD family member 4, humanhuman

TSL 5

Gene SMAD4, Length 576 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD4-207ENST00000589076 NSD1Q96L73 2696 aaPredicted RBP1.69□□□□□ -2.14
SMAD4-207ENST00000589076 IGHV3-21A0A0B4J1V1 117 aa1.69□□□□□ -2.14
SMAD4-207ENST00000589076 IGHV3-43A0A0B4J1X8 118 aa1.69□□□□□ -2.14
SMAD4-207ENST00000589076 A0A1W2PNN7 141 aa1.69□□□□□ -2.14
SMAD4-207ENST00000589076 GOLGA8IPA6NC78 632 aa1.69□□□□□ -2.14
SMAD4-207ENST00000589076 CRXO43186 299 aaPredicted RBP1.69□□□□□ -2.14
SMAD4-207ENST00000589076 HLA-AP01891 365 aaKnown RBP1.69□□□□□ -2.14
SMAD4-207ENST00000589076 SLC2A1P11166 492 aa1.69□□□□□ -2.14
SMAD4-207ENST00000589076 M6PRP20645 277 aa1.69□□□□□ -2.14
SMAD4-207ENST00000589076 CNTFRP26992 372 aa1.69□□□□□ -2.14
SMAD4-207ENST00000589076 PSMB9P28065 219 aa1.69□□□□□ -2.14
SMAD4-207ENST00000589076 LCN1P31025 176 aa1.69□□□□□ -2.14
SMAD4-207ENST00000589076 LGALS7P47929 136 aa1.69□□□□□ -2.14
SMAD4-207ENST00000589076 ZNF83P51522 516 aa1.69□□□□□ -2.14
SMAD4-207ENST00000589076 HADHBP55084 474 aaKnown RBP1.69□□□□□ -2.14
SMAD4-207ENST00000589076 KLF3P57682 345 aaPredicted RBP1.69□□□□□ -2.14
SMAD4-207ENST00000589076 BAXQ07812 192 aa1.69□□□□□ -2.14
SMAD4-207ENST00000589076 STX3Q13277 289 aa1.69□□□□□ -2.14
SMAD4-207ENST00000589076 TRAM1Q15629 374 aa1.69□□□□□ -2.14
SMAD4-207ENST00000589076 TRIP13Q15645 432 aaPredicted RBP1.69□□□□□ -2.14
SMAD4-207ENST00000589076 TMEM241Q24JQ0 296 aa1.69□□□□□ -2.14
SMAD4-207ENST00000589076 GOLGA7BQ2TAP0 167 aa1.69□□□□□ -2.14
SMAD4-207ENST00000589076 DEFB134Q4QY38 66 aa1.69□□□□□ -2.14
SMAD4-207ENST00000589076 ZNF660Q6AZW8 331 aaPredicted RBP1.69□□□□□ -2.14
SMAD4-207ENST00000589076 AMMECR1LQ6DCA0 310 aa1.69□□□□□ -2.14
SMAD4-207ENST00000589076 ERICH5Q6P6B1 374 aa1.69□□□□□ -2.14
SMAD4-207ENST00000589076 BRD3OSQ6XYD6 125 aa1.69□□□□□ -2.14
SMAD4-207ENST00000589076 Q6ZQT7 251 aa1.69□□□□□ -2.14
SMAD4-207ENST00000589076 Q6ZT83 130 aa1.69□□□□□ -2.14
SMAD4-207ENST00000589076 OR2M3Q8NG83 312 aa1.69□□□□□ -2.14
SMAD4-207ENST00000589076 C2orf15Q8WU43 125 aaKnown RBP1.69□□□□□ -2.14
SMAD4-207ENST00000589076 TWIST2Q8WVJ9 160 aa1.69□□□□□ -2.14
SMAD4-207ENST00000589076 IFT81Q8WYA0 676 aa1.69□□□□□ -2.14
SMAD4-207ENST00000589076 ZNF75AQ96N20 296 aa1.69□□□□□ -2.14
SMAD4-207ENST00000589076 OLFM3Q96PB7 478 aa1.69□□□□□ -2.14
SMAD4-207ENST00000589076 APOL4Q9BPW4 351 aa1.69□□□□□ -2.14
SMAD4-207ENST00000589076 ANAPC13Q9BS18 74 aa1.69□□□□□ -2.14
SMAD4-207ENST00000589076 SLC25A31Q9H0C2 315 aa1.69□□□□□ -2.14
SMAD4-207ENST00000589076 POMKQ9H5K3 350 aa1.69□□□□□ -2.14
SMAD4-207ENST00000589076 ASF1BQ9NVP2 202 aa1.69□□□□□ -2.14
SMAD4-207ENST00000589076 MAT2BQ9NZL9 334 aa1.69□□□□□ -2.14
SMAD4-207ENST00000589076 RBM12B-AS1Q9P1G2 102 aa1.69□□□□□ -2.14
SMAD4-207ENST00000589076 CYB5R1Q9UHQ9 305 aa1.69□□□□□ -2.14
SMAD4-207ENST00000589076 ICOSQ9Y6W8 199 aa1.69□□□□□ -2.14
SMAD4-207ENST00000589076 FLNCQ14315 2725 aa1.69□□□□□ -2.14
SMAD4-207ENST00000589076 ZANQ9Y493 2812 aa1.69□□□□□ -2.14
SMAD4-207ENST00000589076 HERC1Q15751 4861 aa1.69□□□□□ -2.14
SMAD4-207ENST00000589076 PLXNB1O43157 2135 aa1.69□□□□□ -2.14
SMAD4-207ENST00000589076 HIVEP3Q5T1R4 2406 aa1.68□□□□□ -2.14
SMAD4-207ENST00000589076 ATRNO75882 1429 aa1.68□□□□□ -2.14
SMAD4-207ENST00000589076 ARAP3Q8WWN8 1544 aa1.68□□□□□ -2.14
SMAD4-207ENST00000589076 MYO15BQ96JP2 1530 aa1.68□□□□□ -2.14
SMAD4-207ENST00000589076 TRAV8-3A0A0A6YYJ7 113 aa1.68□□□□□ -2.14
SMAD4-207ENST00000589076 D6RAR5 112 aa1.68□□□□□ -2.14
SMAD4-207ENST00000589076 I3L4J1 428 aa1.68□□□□□ -2.14
SMAD4-207ENST00000589076 CDIPTO14735 213 aa1.68□□□□□ -2.14
SMAD4-207ENST00000589076 YKT6O15498 198 aa1.68□□□□□ -2.14
SMAD4-207ENST00000589076 LDOC1O95751 146 aaPredicted RBP1.68□□□□□ -2.14
SMAD4-207ENST00000589076 IGHV3-53P01767 116 aa1.68□□□□□ -2.14
SMAD4-207ENST00000589076 IGKV5-2P06315 115 aa1.68□□□□□ -2.14
SMAD4-207ENST00000589076 GTF2F2P13984 249 aa1.68□□□□□ -2.14
SMAD4-207ENST00000589076 PRPS1L1P21108 318 aa1.68□□□□□ -2.14
SMAD4-207ENST00000589076 MAGEA3P43357 314 aa1.68□□□□□ -2.14
SMAD4-207ENST00000589076 HBG1P69891 147 aa1.68□□□□□ -2.14
SMAD4-207ENST00000589076 HBG2P69892 147 aa1.68□□□□□ -2.14
SMAD4-207ENST00000589076 CD164Q04900 197 aa1.68□□□□□ -2.14
SMAD4-207ENST00000589076 USF2Q15853 346 aaPredicted RBP1.68□□□□□ -2.14
SMAD4-207ENST00000589076 BSXQ3C1V8 233 aa1.68□□□□□ -2.14
SMAD4-207ENST00000589076 CEACAM21Q3KPI0 293 aa1.68□□□□□ -2.14
SMAD4-207ENST00000589076 PDZD11Q5EBL8 140 aa1.68□□□□□ -2.14
SMAD4-207ENST00000589076 LAMTOR1Q6IAA8 161 aa1.68□□□□□ -2.14
SMAD4-207ENST00000589076 DPPA2Q7Z7J5 298 aa1.68□□□□□ -2.14
SMAD4-207ENST00000589076 MRPL52Q86TS9 123 aaKnown RBP1.68□□□□□ -2.14
SMAD4-207ENST00000589076 LRRC6Q86X45 466 aa1.68□□□□□ -2.14
SMAD4-207ENST00000589076 ZFP82Q8N141 532 aa1.68□□□□□ -2.14
SMAD4-207ENST00000589076 BPIFB6Q8NFQ5 453 aa1.68□□□□□ -2.14
SMAD4-207ENST00000589076 OR2K2Q8NGT1 345 aa1.68□□□□□ -2.14
SMAD4-207ENST00000589076 FXYD5Q96DB9 178 aa1.68□□□□□ -2.14
SMAD4-207ENST00000589076 PYURFQ96I23 114 aa1.68□□□□□ -2.14
SMAD4-207ENST00000589076 CATSPER2Q96P56 530 aa1.68□□□□□ -2.14
SMAD4-207ENST00000589076 SUCNR1Q9BXA5 334 aa1.68□□□□□ -2.14
SMAD4-207ENST00000589076 ULBP1Q9BZM6 244 aa1.68□□□□□ -2.14
SMAD4-207ENST00000589076 ZNF436Q9C0F3 470 aaPredicted RBP1.68□□□□□ -2.14
SMAD4-207ENST00000589076 TXNIPQ9H3M7 391 aa1.68□□□□□ -2.14
SMAD4-207ENST00000589076 MRM2Q9UI43 246 aaKnown RBP1.68□□□□□ -2.14
SMAD4-207ENST00000589076 R4GN34 69 aa1.68□□□□□ -2.14
SMAD4-207ENST00000589076 USP42Q9H9J4 1324 aaKnown RBP1.67□□□□□ -2.14
SMAD4-207ENST00000589076 IGHV2-26A0A0B4J1V2 119 aa1.67□□□□□ -2.14
SMAD4-207ENST00000589076 A0A1W2PRG6 482 aa1.67□□□□□ -2.14
SMAD4-207ENST00000589076 ZNF729A6NN14 1252 aaPredicted RBP1.67□□□□□ -2.14
SMAD4-207ENST00000589076 F5H5P2 479 aa1.67□□□□□ -2.14
SMAD4-207ENST00000589076 M0QXV9 152 aa1.67□□□□□ -2.14
SMAD4-207ENST00000589076 SHOX2O60902 331 aaPredicted RBP1.67□□□□□ -2.14
SMAD4-207ENST00000589076 FADS2O95864 444 aaKnown RBP1.67□□□□□ -2.14
SMAD4-207ENST00000589076 TRGV3P03979 118 aa1.67□□□□□ -2.14
SMAD4-207ENST00000589076 TSPOP30536 169 aa1.67□□□□□ -2.14
SMAD4-207ENST00000589076 CBX5P45973 191 aa1.67□□□□□ -2.14
SMAD4-207ENST00000589076 FOXA1P55317 472 aa1.67□□□□□ -2.14
SMAD4-207ENST00000589076 RAB25P57735 213 aa1.67□□□□□ -2.14
SMAD4-207ENST00000589076 UBE2KP61086 200 aa1.67□□□□□ -2.14
Retrieved 100 of 20,778 RNA–protein pairs in 30.8 ms