RNA–Protein interactions for RNA: ENST00000588915.1

VMP1-209, Transcript of vacuole membrane protein 1, humanhuman

TSL 4

Gene VMP1, Length 231 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VMP1-209ENST00000588915 DGCR2P98153 550 aa11.06□□□□□ -0.64
VMP1-209ENST00000588915 PAX5Q02548 391 aa11.06□□□□□ -0.64
VMP1-209ENST00000588915 ZNF85Q03923 595 aa11.06□□□□□ -0.64
VMP1-209ENST00000588915 SCN1BQ07699 218 aa11.06□□□□□ -0.64
VMP1-209ENST00000588915 MADCAM1Q13477 382 aa11.06□□□□□ -0.64
VMP1-209ENST00000588915 RBM39Q14498 530 aaKnown RBP11.06□□□□□ -0.64
VMP1-209ENST00000588915 TP53I3Q53FA7 332 aa11.06□□□□□ -0.64
VMP1-209ENST00000588915 FOXRED2Q8IWF2 684 aa11.06□□□□□ -0.64
VMP1-209ENST00000588915 C5orf56Q8N8D9 126 aa11.06□□□□□ -0.64
VMP1-209ENST00000588915 OR10A7Q8NGE5 316 aa11.06□□□□□ -0.64
VMP1-209ENST00000588915 OR51T1Q8NGJ9 327 aa11.06□□□□□ -0.64
VMP1-209ENST00000588915 TRUB1Q8WWH5 349 aaKnown RBP11.06□□□□□ -0.64
VMP1-209ENST00000588915 TOMM40LQ969M1 308 aa11.06□□□□□ -0.64
VMP1-209ENST00000588915 EME1Q96AY2 570 aa11.06□□□□□ -0.64
VMP1-209ENST00000588915 HRASLS5Q96KN8 279 aa11.06□□□□□ -0.64
VMP1-209ENST00000588915 BARHL1Q9BZE3 327 aa11.06□□□□□ -0.64
VMP1-209ENST00000588915 SERPINE3A8MV23 424 aa11.05□□□□□ -0.64
VMP1-209ENST00000588915 ZFPL1O95159 310 aa11.05□□□□□ -0.64
VMP1-209ENST00000588915 APOL3O95236 402 aa11.05□□□□□ -0.64
VMP1-209ENST00000588915 HTR1AP08908 422 aa11.05□□□□□ -0.64
VMP1-209ENST00000588915 TMEM11P17152 192 aa11.05□□□□□ -0.64
VMP1-209ENST00000588915 KCNJ3P48549 501 aa11.05□□□□□ -0.64
VMP1-209ENST00000588915 MTNR1BP49286 362 aa11.05□□□□□ -0.64
VMP1-209ENST00000588915 BNIP1Q12981 228 aa11.05□□□□□ -0.64
VMP1-209ENST00000588915 EBI3Q14213 229 aa11.05□□□□□ -0.64
VMP1-209ENST00000588915 CDK5R1Q15078 307 aa11.05□□□□□ -0.64
VMP1-209ENST00000588915 ELP2Q6IA86 826 aa11.05□□□□□ -0.64
VMP1-209ENST00000588915 RNF144BQ7Z419 303 aa11.05□□□□□ -0.64
VMP1-209ENST00000588915 ZNF695Q8IW36 515 aa11.05□□□□□ -0.64
VMP1-209ENST00000588915 RFT1Q96AA3 541 aa11.05□□□□□ -0.64
VMP1-209ENST00000588915 SLC7A6OSQ96CW6 309 aaPredicted RBP11.05□□□□□ -0.64
VMP1-209ENST00000588915 MYCBPQ99417 103 aaPredicted RBP11.05□□□□□ -0.64
VMP1-209ENST00000588915 CIB1Q99828 191 aa11.05□□□□□ -0.64
VMP1-209ENST00000588915 OSBPL10Q9BXB5 764 aa11.05□□□□□ -0.64
VMP1-209ENST00000588915 IDI2-AS1Q9NZ38 188 aa11.05□□□□□ -0.64
VMP1-209ENST00000588915 A0A1W2PPI3 338 aa11.04□□□□□ -0.64
VMP1-209ENST00000588915 NUDT19A8MXV4 375 aa11.04□□□□□ -0.64
VMP1-209ENST00000588915 NPIPB11E5RHQ5 1161 aa11.04□□□□□ -0.64
VMP1-209ENST00000588915 J3QRE1 110 aa11.04□□□□□ -0.64
VMP1-209ENST00000588915 IL1AP01583 271 aa11.04□□□□□ -0.64
VMP1-209ENST00000588915 NFYBP25208 207 aa11.04□□□□□ -0.64
VMP1-209ENST00000588915 NANOS3P60323 173 aaKnown RBP11.04□□□□□ -0.64
VMP1-209ENST00000588915 HES1Q14469 280 aa11.04□□□□□ -0.64
VMP1-209ENST00000588915 SLC25A30Q5SVS4 291 aa11.04□□□□□ -0.64
VMP1-209ENST00000588915 TEX38Q6PEX7 206 aa11.04□□□□□ -0.64
VMP1-209ENST00000588915 C8orf86Q6ZUL3 223 aa11.04□□□□□ -0.64
VMP1-209ENST00000588915 SLC35E3Q7Z769 313 aa11.04□□□□□ -0.64
VMP1-209ENST00000588915 DRAM1Q8N682 238 aa11.04□□□□□ -0.64
VMP1-209ENST00000588915 OR5D14Q8NGL3 314 aa11.04□□□□□ -0.64
VMP1-209ENST00000588915 OR13C3Q8NGS6 347 aa11.04□□□□□ -0.64
VMP1-209ENST00000588915 OR13C9Q8NGT0 318 aa11.04□□□□□ -0.64
VMP1-209ENST00000588915 OR56B4Q8NH76 319 aa11.04□□□□□ -0.64
VMP1-209ENST00000588915 NOL4LQ96MY1 436 aaPredicted RBP11.04□□□□□ -0.64
VMP1-209ENST00000588915 GON7Q9BXV9 100 aa11.04□□□□□ -0.64
VMP1-209ENST00000588915 GABARAPL3Q9BY60 117 aa11.04□□□□□ -0.64
VMP1-209ENST00000588915 PPIL3Q9H2H8 161 aaKnown RBP11.04□□□□□ -0.64
VMP1-209ENST00000588915 ZCCHC4Q9H5U6 513 aa11.04□□□□□ -0.64
VMP1-209ENST00000588915 CALYQ9NYX4 217 aa11.04□□□□□ -0.64
VMP1-209ENST00000588915 PSG11Q9UQ72 335 aa11.04□□□□□ -0.64
VMP1-209ENST00000588915 MYRFQ9Y2G1 1151 aa11.04□□□□□ -0.64
VMP1-209ENST00000588915 AP4S1Q9Y587 144 aa11.04□□□□□ -0.64
VMP1-209ENST00000588915 MEIKINA0A087WXM9 373 aa11.03□□□□□ -0.64
VMP1-209ENST00000588915 AP4M1O00189 453 aa11.03□□□□□ -0.64
VMP1-209ENST00000588915 SLC16A6O15403 523 aa11.03□□□□□ -0.64
VMP1-209ENST00000588915 FCGR1AP12314 374 aa11.03□□□□□ -0.64
VMP1-209ENST00000588915 POLR2IP36954 125 aaKnown RBP11.03□□□□□ -0.64
VMP1-209ENST00000588915 ZP1P60852 638 aa11.03□□□□□ -0.64
VMP1-209ENST00000588915 ZNF816Q0VGE8 651 aaPredicted RBP11.03□□□□□ -0.64
VMP1-209ENST00000588915 IL13RA2Q14627 380 aa11.03□□□□□ -0.64
VMP1-209ENST00000588915 ATXN7L3Q14CW9 347 aaPredicted RBP11.03□□□□□ -0.64
VMP1-209ENST00000588915 KISS1Q15726 138 aa11.03□□□□□ -0.64
VMP1-209ENST00000588915 SERPINA12Q8IW75 414 aa11.03□□□□□ -0.64
VMP1-209ENST00000588915 STPG2Q8N412 459 aa11.03□□□□□ -0.64
VMP1-209ENST00000588915 KLHL30-AS1Q8NEE0 82 aa11.03□□□□□ -0.64
VMP1-209ENST00000588915 PXT1Q8NFP0 134 aa11.03□□□□□ -0.64
VMP1-209ENST00000588915 OR5D18Q8NGL1 313 aa11.03□□□□□ -0.64
VMP1-209ENST00000588915 CPNE2Q96FN4 548 aaPredicted RBP11.03□□□□□ -0.64
VMP1-209ENST00000588915 MRPL48Q96GC5 212 aaKnown RBP11.03□□□□□ -0.64
VMP1-209ENST00000588915 SPACA5Q96QH8 159 aa11.03□□□□□ -0.64
VMP1-209ENST00000588915 RIBC2Q9H4K1 309 aa11.03□□□□□ -0.64
VMP1-209ENST00000588915 LSM4Q9Y4Z0 139 aaKnown RBP11.03□□□□□ -0.64
VMP1-209ENST00000588915 U3KQK5 164 aa11.03□□□□□ -0.64
VMP1-209ENST00000588915 DAPL1A0PJW8 107 aa11.02□□□□□ -0.65
VMP1-209ENST00000588915 OR4C45A6NMZ5 311 aa11.02□□□□□ -0.65
VMP1-209ENST00000588915 H0YJX3 145 aa11.02□□□□□ -0.65
VMP1-209ENST00000588915 CCL24O00175 119 aa11.02□□□□□ -0.65
VMP1-209ENST00000588915 IGKV1D-33P01593 117 aa11.02□□□□□ -0.65
VMP1-209ENST00000588915 IGKV1-33P01594 117 aa11.02□□□□□ -0.65
VMP1-209ENST00000588915 CCDC159P0C7I6 412 aa11.02□□□□□ -0.65
VMP1-209ENST00000588915 TMEM225BP0DP42 221 aa11.02□□□□□ -0.65
VMP1-209ENST00000588915 ALKBH1Q13686 389 aaKnown RBP11.02□□□□□ -0.65
VMP1-209ENST00000588915 KIR2DS1Q14954 304 aa11.02□□□□□ -0.65
VMP1-209ENST00000588915 PNLIPRP3Q17RR3 467 aa11.02□□□□□ -0.65
VMP1-209ENST00000588915 PAN3Q58A45 887 aaKnown RBP11.02□□□□□ -0.65
VMP1-209ENST00000588915 UTF1Q5T230 341 aa11.02□□□□□ -0.65
VMP1-209ENST00000588915 MEDAGQ5VYS4 303 aa11.02□□□□□ -0.65
VMP1-209ENST00000588915 C18orf65Q6ZTR6 163 aa11.02□□□□□ -0.65
VMP1-209ENST00000588915 TGIF2LXQ8IUE1 241 aa11.02□□□□□ -0.65
VMP1-209ENST00000588915 PARP16Q8N5Y8 322 aa11.02□□□□□ -0.65
VMP1-209ENST00000588915 ACBD7Q8N6N7 88 aa11.02□□□□□ -0.65
Retrieved 100 of 20,778 RNA–protein pairs in 49.8 ms