RNA–Protein interactions for RNA: ENST00000587525.5

CACNA1A-209, Transcript of calcium voltage-gated channel subunit alpha1 A, humanhuman

TSL 1 (best)

Gene CACNA1A, Length 3,765 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACNA1A-209ENST00000587525 TRGC2P03986 189 aa11.97□□□□□ -0.49
CACNA1A-209ENST00000587525 ZNF735P0CB33 412 aa11.97□□□□□ -0.49
CACNA1A-209ENST00000587525 ZNF429Q86V71 674 aa11.97□□□□□ -0.49
CACNA1A-209ENST00000587525 PP6455Q8WZ26 134 aa11.97□□□□□ -0.49
CACNA1A-209ENST00000587525 SRXN1Q9BYN0 137 aa11.97□□□□□ -0.49
CACNA1A-209ENST00000587525 SLC7A10Q9NS82 523 aa11.97□□□□□ -0.49
CACNA1A-209ENST00000587525 AQP7P3A6NL99 342 aa11.96□□□□□ -0.49
CACNA1A-209ENST00000587525 SCTP09683 121 aa11.96□□□□□ -0.49
CACNA1A-209ENST00000587525 DSCR4P56555 118 aaPredicted RBP11.96□□□□□ -0.49
CACNA1A-209ENST00000587525 OR10V1Q8NGI7 309 aa11.96□□□□□ -0.49
CACNA1A-209ENST00000587525 COA4Q9NYJ1 87 aa11.96□□□□□ -0.49
CACNA1A-209ENST00000587525 BOKQ9UMX3 212 aaPredicted RBP11.96□□□□□ -0.49
CACNA1A-209ENST00000587525 PMS2P1A4D2B8 440 aa11.96□□□□□ -0.49
CACNA1A-209ENST00000587525 NGFP01138 241 aa11.96□□□□□ -0.49
CACNA1A-209ENST00000587525 CELA3AP09093 270 aa11.96□□□□□ -0.49
CACNA1A-209ENST00000587525 ZNF133P52736 654 aaPredicted RBP11.96□□□□□ -0.49
CACNA1A-209ENST00000587525 PCBD1P61457 104 aa11.96□□□□□ -0.49
CACNA1A-209ENST00000587525 SSBP1Q04837 148 aaKnown RBP11.96□□□□□ -0.49
CACNA1A-209ENST00000587525 CLN3Q13286 438 aa11.96□□□□□ -0.49
CACNA1A-209ENST00000587525 HIKESHIQ53FT3 197 aa11.96□□□□□ -0.49
CACNA1A-209ENST00000587525 SKA3Q8IX90 412 aa11.96□□□□□ -0.49
CACNA1A-209ENST00000587525 GAPTQ8N292 157 aa11.96□□□□□ -0.49
CACNA1A-209ENST00000587525 SLC35G3Q8N808 338 aa11.96□□□□□ -0.49
CACNA1A-209ENST00000587525 ZNF610Q8N9Z0 462 aa11.96□□□□□ -0.49
CACNA1A-209ENST00000587525 OR10J5Q8NHC4 309 aa11.96□□□□□ -0.49
CACNA1A-209ENST00000587525 SPIN2AQ99865 258 aa11.96□□□□□ -0.49
CACNA1A-209ENST00000587525 SPIN2BQ9BPZ2 258 aa11.96□□□□□ -0.49
CACNA1A-209ENST00000587525 ATG101Q9BSB4 218 aa11.96□□□□□ -0.49
CACNA1A-209ENST00000587525 CABLES2Q9BTV7 478 aa11.96□□□□□ -0.49
CACNA1A-209ENST00000587525 LAMP3Q9UQV4 416 aa11.96□□□□□ -0.49
CACNA1A-209ENST00000587525 NSG2Q9Y328 171 aa11.96□□□□□ -0.49
CACNA1A-209ENST00000587525 THADAQ6YHU6 1953 aa11.96□□□□□ -0.49
CACNA1A-209ENST00000587525 E5RGE8 158 aa11.96□□□□□ -0.5
CACNA1A-209ENST00000587525 LYZL6O75951 148 aa11.96□□□□□ -0.5
CACNA1A-209ENST00000587525 BCL3P20749 454 aa11.96□□□□□ -0.5
CACNA1A-209ENST00000587525 FUT3P21217 361 aa11.96□□□□□ -0.5
CACNA1A-209ENST00000587525 THBS4P35443 961 aa11.96□□□□□ -0.5
CACNA1A-209ENST00000587525 EDDM3BP56851 147 aa11.96□□□□□ -0.5
CACNA1A-209ENST00000587525 SURF2Q15527 256 aaPredicted RBP11.96□□□□□ -0.5
CACNA1A-209ENST00000587525 ATP1A1-AS1Q5TC04 95 aa11.96□□□□□ -0.5
CACNA1A-209ENST00000587525 VAMP5O95183 116 aa11.95□□□□□ -0.5
CACNA1A-209ENST00000587525 MAGEA5P43359 124 aa11.95□□□□□ -0.5
CACNA1A-209ENST00000587525 PSG4Q00888 419 aa11.95□□□□□ -0.5
CACNA1A-209ENST00000587525 DHRS7BQ6IAN0 325 aaPredicted RBP11.95□□□□□ -0.5
CACNA1A-209ENST00000587525 C15orf54Q8N8G6 183 aa11.95□□□□□ -0.5
CACNA1A-209ENST00000587525 OR10AD1Q8NGE0 317 aa11.95□□□□□ -0.5
CACNA1A-209ENST00000587525 EDEM2Q9BV94 578 aa11.95□□□□□ -0.5
CACNA1A-209ENST00000587525 GGACTQ9BVM4 153 aa11.95□□□□□ -0.5
CACNA1A-209ENST00000587525 FAM117AQ9C073 453 aa11.95□□□□□ -0.5
CACNA1A-209ENST00000587525 SLC35B3Q9H1N7 401 aa11.95□□□□□ -0.5
CACNA1A-209ENST00000587525 MSL2Q9HCI7 577 aa11.95□□□□□ -0.5
CACNA1A-209ENST00000587525 HS3ST3B1Q9Y662 390 aa11.95□□□□□ -0.5
CACNA1A-209ENST00000587525 NPIPB7O75200 414 aa11.95□□□□□ -0.5
CACNA1A-209ENST00000587525 CD74P04233 296 aa11.95□□□□□ -0.5
CACNA1A-209ENST00000587525 SNRPCP09234 159 aaKnown RBP11.95□□□□□ -0.5
CACNA1A-209ENST00000587525 SLC25A4P12235 298 aa11.95□□□□□ -0.5
CACNA1A-209ENST00000587525 GABRA4P48169 554 aa11.95□□□□□ -0.5
CACNA1A-209ENST00000587525 UBE2G2P60604 165 aa11.95□□□□□ -0.5
CACNA1A-209ENST00000587525 PRDX4Q13162 271 aa11.95□□□□□ -0.5
CACNA1A-209ENST00000587525 MPV17LQ2QL34 196 aa11.95□□□□□ -0.5
CACNA1A-209ENST00000587525 OR2V1Q8NHB1 315 aa11.95□□□□□ -0.5
CACNA1A-209ENST00000587525 RNF126Q9BV68 326 aa11.95□□□□□ -0.5
CACNA1A-209ENST00000587525 ALX4Q9H161 411 aaPredicted RBP11.95□□□□□ -0.5
CACNA1A-209ENST00000587525 SLC26A1Q9H2B4 701 aa11.95□□□□□ -0.5
CACNA1A-209ENST00000587525 DOK5Q9P104 306 aa11.95□□□□□ -0.5
CACNA1A-209ENST00000587525 WSB1Q9Y6I7 421 aa11.95□□□□□ -0.5
CACNA1A-209ENST00000587525 GPR137BO60478 399 aa11.95□□□□□ -0.5
CACNA1A-209ENST00000587525 CD1AP06126 327 aa11.95□□□□□ -0.5
CACNA1A-209ENST00000587525 CALCRP30988 508 aa11.95□□□□□ -0.5
CACNA1A-209ENST00000587525 EXT1Q16394 746 aa11.95□□□□□ -0.5
CACNA1A-209ENST00000587525 GFI1BQ5VTD9 330 aa11.95□□□□□ -0.5
CACNA1A-209ENST00000587525 ABHD14AQ9BUJ0 271 aa11.95□□□□□ -0.5
CACNA1A-209ENST00000587525 NAA60Q9H7X0 242 aa11.95□□□□□ -0.5
CACNA1A-209ENST00000587525 PATZ1Q9HBE1 687 aaKnown RBP11.95□□□□□ -0.5
CACNA1A-209ENST00000587525 MBPP02686 304 aaPredicted RBP11.94□□□□□ -0.5
CACNA1A-209ENST00000587525 RAB4BP61018 213 aa11.94□□□□□ -0.5
CACNA1A-209ENST00000587525 GAMTQ14353 236 aa11.94□□□□□ -0.5
CACNA1A-209ENST00000587525 ZNF345Q14585 488 aa11.94□□□□□ -0.5
CACNA1A-209ENST00000587525 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP11.94□□□□□ -0.5
CACNA1A-209ENST00000587525 KCNIP1Q9NZI2 227 aa11.94□□□□□ -0.5
CACNA1A-209ENST00000587525 TGIF2-C20orf24A0A0A6YYL0 155 aa11.94□□□□□ -0.5
CACNA1A-209ENST00000587525 TMEM14DPA8MWL7 114 aa11.94□□□□□ -0.5
CACNA1A-209ENST00000587525 CHST1O43916 411 aa11.94□□□□□ -0.5
CACNA1A-209ENST00000587525 TBPP20226 339 aa11.94□□□□□ -0.5
CACNA1A-209ENST00000587525 CASP6P55212 293 aa11.94□□□□□ -0.5
CACNA1A-209ENST00000587525 SUMO3P55854 103 aaPredicted RBP11.94□□□□□ -0.5
CACNA1A-209ENST00000587525 TBC1D26Q86UD7 250 aa11.94□□□□□ -0.5
CACNA1A-209ENST00000587525 GNG12Q9UBI6 72 aa11.94□□□□□ -0.5
CACNA1A-209ENST00000587525 MED13Q9UHV7 2174 aa11.94□□□□□ -0.5
CACNA1A-209ENST00000587525 PCNX2A6NKB5 2137 aa11.94□□□□□ -0.5
CACNA1A-209ENST00000587525 TFF1P04155 84 aa11.94□□□□□ -0.5
CACNA1A-209ENST00000587525 RAC2P15153 192 aa11.94□□□□□ -0.5
CACNA1A-209ENST00000587525 CEBPDP49716 269 aaPredicted RBP11.94□□□□□ -0.5
CACNA1A-209ENST00000587525 FOXG1P55316 489 aaPredicted RBP11.94□□□□□ -0.5
CACNA1A-209ENST00000587525 SSTP61278 116 aa11.94□□□□□ -0.5
CACNA1A-209ENST00000587525 WDR25Q64LD2 544 aaPredicted RBP11.94□□□□□ -0.5
CACNA1A-209ENST00000587525 WDR5BQ86VZ2 330 aa11.94□□□□□ -0.5
CACNA1A-209ENST00000587525 OR51M1Q9H341 326 aa11.94□□□□□ -0.5
CACNA1A-209ENST00000587525 GCM1Q9NP62 436 aa11.94□□□□□ -0.5
CACNA1A-209ENST00000587525 OPN1MWP04001 364 aa11.93□□□□□ -0.5
Retrieved 100 of 20,778 RNA–protein pairs in 31.7 ms