RNA–Protein interactions for RNA: ENST00000585799.5

SMARCA4-208, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 4, humanhuman

TSL 2

Gene SMARCA4, Length 3,842 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCA4-208ENST00000585799 IL18BPO95998 194 aa10.68□□□□□ -0.7
SMARCA4-208ENST00000585799 ECI1P42126 302 aa10.68□□□□□ -0.7
SMARCA4-208ENST00000585799 OR3A1P47881 315 aa10.68□□□□□ -0.7
SMARCA4-208ENST00000585799 OR8B8Q15620 311 aa10.68□□□□□ -0.7
SMARCA4-208ENST00000585799 BCL2L2Q92843 193 aaPredicted RBP10.68□□□□□ -0.7
SMARCA4-208ENST00000585799 NUP210LQ5VU65 1888 aa10.68□□□□□ -0.7
SMARCA4-208ENST00000585799 NFYBP25208 207 aa10.68□□□□□ -0.7
SMARCA4-208ENST00000585799 KCNRGQ8N5I3 272 aa10.68□□□□□ -0.7
SMARCA4-208ENST00000585799 MRGPRDQ8TDS7 321 aa10.68□□□□□ -0.7
SMARCA4-208ENST00000585799 MARS2Q96GW9 593 aaKnown RBP10.68□□□□□ -0.7
SMARCA4-208ENST00000585799 J3QT63 122 aa10.68□□□□□ -0.7
SMARCA4-208ENST00000585799 WNT9BO14905 357 aa10.68□□□□□ -0.7
SMARCA4-208ENST00000585799 TSPAN15O95858 294 aa10.68□□□□□ -0.7
SMARCA4-208ENST00000585799 IAPPP10997 89 aa10.68□□□□□ -0.7
SMARCA4-208ENST00000585799 WNT5AP41221 380 aa10.68□□□□□ -0.7
SMARCA4-208ENST00000585799 SIGIRRQ6IA17 410 aa10.68□□□□□ -0.7
SMARCA4-208ENST00000585799 FAHD2BQ6P2I3 314 aaPredicted RBP10.68□□□□□ -0.7
SMARCA4-208ENST00000585799 CD300LFQ8TDQ1 290 aa10.68□□□□□ -0.7
SMARCA4-208ENST00000585799 FAHD2AQ96GK7 314 aa10.68□□□□□ -0.7
SMARCA4-208ENST00000585799 RCL1Q9Y2P8 373 aaKnown RBP10.68□□□□□ -0.7
SMARCA4-208ENST00000585799 USF3Q68DE3 2245 aa10.68□□□□□ -0.7
SMARCA4-208ENST00000585799 IGKV3D-15A0A087WSY6 115 aa10.67□□□□□ -0.7
SMARCA4-208ENST00000585799 TRAV14DV4A0A0A6YYC5 116 aa10.67□□□□□ -0.7
SMARCA4-208ENST00000585799 TRGV8A0A0C4DH27 118 aa10.67□□□□□ -0.7
SMARCA4-208ENST00000585799 M0R036 132 aa10.67□□□□□ -0.7
SMARCA4-208ENST00000585799 IRF2P14316 349 aa10.67□□□□□ -0.7
SMARCA4-208ENST00000585799 FGF12P61328 243 aa10.67□□□□□ -0.7
SMARCA4-208ENST00000585799 POLR2GP62487 172 aaKnown RBP eCLIP10.67□□□□□ -0.7
SMARCA4-208ENST00000585799 HIST1H3AP68431 136 aa10.67□□□□□ -0.7
SMARCA4-208ENST00000585799 IZUMO4Q1ZYL8 232 aa10.67□□□□□ -0.7
SMARCA4-208ENST00000585799 HIST2H3PS2Q5TEC6 136 aa10.67□□□□□ -0.7
SMARCA4-208ENST00000585799 ZNF660Q6AZW8 331 aaPredicted RBP10.67□□□□□ -0.7
SMARCA4-208ENST00000585799 HIST2H3AQ71DI3 136 aa10.67□□□□□ -0.7
SMARCA4-208ENST00000585799 BHLHA15Q7RTS1 189 aaPredicted RBP10.67□□□□□ -0.7
SMARCA4-208ENST00000585799 SSX9Q7RTT3 188 aa10.67□□□□□ -0.7
SMARCA4-208ENST00000585799 TBC1D26Q86UD7 250 aa10.67□□□□□ -0.7
SMARCA4-208ENST00000585799 ANGPTL6Q8NI99 470 aa10.67□□□□□ -0.7
SMARCA4-208ENST00000585799 PRRX2Q99811 253 aa10.67□□□□□ -0.7
SMARCA4-208ENST00000585799 SLC2A8Q9NY64 477 aa10.67□□□□□ -0.7
SMARCA4-208ENST00000585799 TNFSF18Q9UNG2 199 aa10.67□□□□□ -0.7
SMARCA4-208ENST00000585799 WASF3Q9UPY6 502 aa10.67□□□□□ -0.7
SMARCA4-208ENST00000585799 C3orf85A0A1B0GTC6 90 aa10.67□□□□□ -0.7
SMARCA4-208ENST00000585799 H0YL77 283 aa10.67□□□□□ -0.7
SMARCA4-208ENST00000585799 RPL36A-HNRNPH2H7BZ11 118 aa10.67□□□□□ -0.7
SMARCA4-208ENST00000585799 GPR31O00270 319 aa10.67□□□□□ -0.7
SMARCA4-208ENST00000585799 ADAM20O43506 726 aa10.67□□□□□ -0.7
SMARCA4-208ENST00000585799 DTYMKP23919 212 aa10.67□□□□□ -0.7
SMARCA4-208ENST00000585799 CEACAM6P40199 344 aa10.67□□□□□ -0.7
SMARCA4-208ENST00000585799 HOXA4Q00056 320 aaPredicted RBP10.67□□□□□ -0.7
SMARCA4-208ENST00000585799 SHEQ5VZ18 495 aa10.67□□□□□ -0.7
SMARCA4-208ENST00000585799 GLYATL2Q8WU03 294 aa10.67□□□□□ -0.7
SMARCA4-208ENST00000585799 LRRC29Q8WV35 223 aa10.67□□□□□ -0.7
SMARCA4-208ENST00000585799 HPSE2Q8WWQ2 592 aa10.67□□□□□ -0.7
SMARCA4-208ENST00000585799 RTBDNQ9BSG5 229 aaPredicted RBP10.67□□□□□ -0.7
SMARCA4-208ENST00000585799 SPRY4Q9C004 299 aa10.67□□□□□ -0.7
SMARCA4-208ENST00000585799 PLK3Q9H4B4 646 aa10.67□□□□□ -0.7
SMARCA4-208ENST00000585799 OPA3Q9H6K4 179 aa10.67□□□□□ -0.7
SMARCA4-208ENST00000585799 PTPRQQ9UMZ3 2332 aa10.67□□□□□ -0.7
SMARCA4-208ENST00000585799 AESQ08117 197 aa10.67□□□□□ -0.7
SMARCA4-208ENST00000585799 FAM89BQ8N5H3 189 aa10.67□□□□□ -0.7
SMARCA4-208ENST00000585799 FAM213BQ8TBF2 198 aa10.67□□□□□ -0.7
SMARCA4-208ENST00000585799 TMEM230Q96A57 120 aa10.67□□□□□ -0.7
SMARCA4-208ENST00000585799 TM2D1Q9BX74 207 aa10.67□□□□□ -0.7
SMARCA4-208ENST00000585799 SUCNR1Q9BXA5 334 aa10.67□□□□□ -0.7
SMARCA4-208ENST00000585799 KIF25Q9UIL4 384 aa10.67□□□□□ -0.7
SMARCA4-208ENST00000585799 NPTNQ9Y639 398 aa10.67□□□□□ -0.7
SMARCA4-208ENST00000585799 IGHV3OR15-7A0A075B7D8 119 aa10.66□□□□□ -0.7
SMARCA4-208ENST00000585799 FAM24AA6NFZ4 105 aa10.66□□□□□ -0.7
SMARCA4-208ENST00000585799 MSGN1A6NI15 193 aa10.66□□□□□ -0.7
SMARCA4-208ENST00000585799 PRR33A8MZF0 331 aa10.66□□□□□ -0.7
SMARCA4-208ENST00000585799 SLC38A6Q8IZM9 456 aa10.66□□□□□ -0.7
SMARCA4-208ENST00000585799 KLF14Q8TD94 323 aaPredicted RBP10.66□□□□□ -0.7
SMARCA4-208ENST00000585799 OSGIN2Q9Y236 505 aa10.66□□□□□ -0.7
SMARCA4-208ENST00000585799 CFAP54Q96N23 3096 aa10.66□□□□□ -0.7
SMARCA4-208ENST00000585799 GLAP06280 429 aa10.66□□□□□ -0.7
SMARCA4-208ENST00000585799 ZNF816Q0VGE8 651 aaPredicted RBP10.66□□□□□ -0.7
SMARCA4-208ENST00000585799 NSUN5P2Q63ZY6 315 aa10.66□□□□□ -0.7
SMARCA4-208ENST00000585799 TMEM211Q6ICI0 200 aa10.66□□□□□ -0.7
SMARCA4-208ENST00000585799 PRSS54Q6PEW0 395 aa10.66□□□□□ -0.7
SMARCA4-208ENST00000585799 FOXL2NBQ6ZUU3 175 aa10.66□□□□□ -0.7
SMARCA4-208ENST00000585799 LILRB2Q8N423 598 aa10.66□□□□□ -0.7
SMARCA4-208ENST00000585799 SCCPDHQ8NBX0 429 aa10.66□□□□□ -0.7
SMARCA4-208ENST00000585799 OR1S2Q8NGQ3 325 aa10.66□□□□□ -0.7
SMARCA4-208ENST00000585799 RNF141Q8WVD5 230 aa10.66□□□□□ -0.7
SMARCA4-208ENST00000585799 TCTEX1D2Q8WW35 142 aa10.66□□□□□ -0.7
SMARCA4-208ENST00000585799 RASL12Q9NYN1 266 aa10.66□□□□□ -0.7
SMARCA4-208ENST00000585799 FBXL17Q9UF56 701 aa10.66□□□□□ -0.7
SMARCA4-208ENST00000585799 NKX2-6A6NCS4 301 aa10.66□□□□□ -0.7
SMARCA4-208ENST00000585799 CRYABP02511 175 aaKnown RBP10.66□□□□□ -0.7
SMARCA4-208ENST00000585799 NMBP08949 121 aa10.66□□□□□ -0.7
SMARCA4-208ENST00000585799 MPV17P39210 176 aa10.66□□□□□ -0.7
SMARCA4-208ENST00000585799 ZNF529Q6P280 563 aa10.66□□□□□ -0.7
SMARCA4-208ENST00000585799 SCGB1C1Q8TD33 95 aa10.66□□□□□ -0.7
SMARCA4-208ENST00000585799 MS4A7Q9GZW8 240 aaPredicted RBP10.66□□□□□ -0.7
SMARCA4-208ENST00000585799 FBLN5Q9UBX5 448 aa10.66□□□□□ -0.7
SMARCA4-208ENST00000585799 PCDHB10Q9UN67 800 aa10.66□□□□□ -0.7
SMARCA4-208ENST00000585799 KCNMB2Q9Y691 235 aa10.66□□□□□ -0.7
SMARCA4-208ENST00000585799 ATP23Q9Y6H3 246 aa10.66□□□□□ -0.7
SMARCA4-208ENST00000585799 SMCO3A2RU48 225 aa10.65□□□□□ -0.7
SMARCA4-208ENST00000585799 MPPED1O15442 326 aa10.65□□□□□ -0.7
Retrieved 100 of 20,778 RNA–protein pairs in 31.2 ms