RNA–Protein interactions for RNA: ENST00000585121.5

SS18-225, Transcript of SS18, nBAF chromatin remodeling complex subunit, humanhuman

TSL 2

Gene SS18, Length 1,545 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SS18-225ENST00000585121 PAN3Q58A45 887 aaKnown RBP10.02□□□□□ -0.81
SS18-225ENST00000585121 YIF1BQ5BJH7 314 aa10.02□□□□□ -0.81
SS18-225ENST00000585121 DDI2Q5TDH0 399 aa10.02□□□□□ -0.81
SS18-225ENST00000585121 PRAMEF5Q5TYX0 476 aa10.02□□□□□ -0.81
SS18-225ENST00000585121 CRIP3Q6Q6R5 217 aa10.02□□□□□ -0.81
SS18-225ENST00000585121 HEPN1Q6WQI6 88 aa10.02□□□□□ -0.81
SS18-225ENST00000585121 ABHD12Q8N2K0 398 aa10.02□□□□□ -0.81
SS18-225ENST00000585121 ZNF565Q8N9K5 539 aa10.02□□□□□ -0.81
SS18-225ENST00000585121 ZNF596Q8TC21 504 aa10.02□□□□□ -0.81
SS18-225ENST00000585121 NKX3-1Q99801 234 aaPredicted RBP10.02□□□□□ -0.81
SS18-225ENST00000585121 HILPDAQ9Y5L2 63 aa10.02□□□□□ -0.81
SS18-225ENST00000585121 TOR1AO14656 332 aa10.01□□□□□ -0.81
SS18-225ENST00000585121 ZNF780AO75290 641 aaPredicted RBP10.01□□□□□ -0.81
SS18-225ENST00000585121 C21orf33P30042 268 aaPredicted RBP10.01□□□□□ -0.81
SS18-225ENST00000585121 KCNJ3P48549 501 aa10.01□□□□□ -0.81
SS18-225ENST00000585121 Q499Y3 187 aa10.01□□□□□ -0.81
SS18-225ENST00000585121 DMKNQ6E0U4 476 aaPredicted RBP10.01□□□□□ -0.81
SS18-225ENST00000585121 Q6ZTK2 550 aa10.01□□□□□ -0.81
SS18-225ENST00000585121 BPIFB6Q8NFQ5 453 aa10.01□□□□□ -0.81
SS18-225ENST00000585121 TSPAN14Q8NG11 270 aa10.01□□□□□ -0.81
SS18-225ENST00000585121 OR51T1Q8NGJ9 327 aa10.01□□□□□ -0.81
SS18-225ENST00000585121 OR10K1Q8NGX5 313 aa10.01□□□□□ -0.81
SS18-225ENST00000585121 PIFOQ8TCI5 191 aa10.01□□□□□ -0.81
SS18-225ENST00000585121 CREB3L1Q96BA8 519 aa10.01□□□□□ -0.81
SS18-225ENST00000585121 PLCXD1Q9NUJ7 323 aa10.01□□□□□ -0.81
SS18-225ENST00000585121 DPM3Q9P2X0 92 aa10.01□□□□□ -0.81
SS18-225ENST00000585121 PSORS1C1Q9UIG5 152 aa10.01□□□□□ -0.81
SS18-225ENST00000585121 TCF19Q9Y242 345 aa10.01□□□□□ -0.81
SS18-225ENST00000585121 SIRT4Q9Y6E7 314 aaPredicted RBP10.01□□□□□ -0.81
SS18-225ENST00000585121 A0A087WXM4 84 aa10□□□□□ -0.81
SS18-225ENST00000585121 MEIKINA0A087WXM9 373 aa10□□□□□ -0.81
SS18-225ENST00000585121 ZNF729A6NN14 1252 aaPredicted RBP10□□□□□ -0.81
SS18-225ENST00000585121 HSPB6O14558 160 aa10□□□□□ -0.81
SS18-225ENST00000585121 XPNPEP2O43895 674 aa10□□□□□ -0.81
SS18-225ENST00000585121 CDRT1O95170 752 aa10□□□□□ -0.81
SS18-225ENST00000585121 CRHBPP24387 322 aa10□□□□□ -0.81
SS18-225ENST00000585121 OR3A4PP47883 348 aa10□□□□□ -0.81
SS18-225ENST00000585121 RAB13P51153 203 aa10□□□□□ -0.81
SS18-225ENST00000585121 DYNLT3P51808 116 aa10□□□□□ -0.81
SS18-225ENST00000585121 PRRX1P54821 245 aa10□□□□□ -0.81
SS18-225ENST00000585121 KRTAP10-3P60369 221 aa10□□□□□ -0.81
SS18-225ENST00000585121 ASCL4Q6XD76 172 aa10□□□□□ -0.81
SS18-225ENST00000585121 AHSA2Q719I0 299 aa10□□□□□ -0.81
SS18-225ENST00000585121 DYNAPQ8N1N2 210 aa10□□□□□ -0.81
SS18-225ENST00000585121 OSR2Q8N2R0 312 aa10□□□□□ -0.81
SS18-225ENST00000585121 THRSPQ92748 146 aa10□□□□□ -0.81
SS18-225ENST00000585121 COQ2Q96H96 371 aa10□□□□□ -0.81
SS18-225ENST00000585121 MRPS26Q9BYN8 205 aaKnown RBP10□□□□□ -0.81
SS18-225ENST00000585121 NCOR1P1Q9H4R4 102 aa10□□□□□ -0.81
SS18-225ENST00000585121 SCN3BQ9NY72 215 aa10□□□□□ -0.81
SS18-225ENST00000585121 ST3GAL6Q9Y274 331 aa10□□□□□ -0.81
SS18-225ENST00000585121 ERGIC3Q9Y282 383 aa10□□□□□ -0.81
SS18-225ENST00000585121 TPRKBQ9Y3C4 175 aa10□□□□□ -0.81
SS18-225ENST00000585121 CMYA5Q8N3K9 4069 aa10□□□□□ -0.81
SS18-225ENST00000585121 TRBV5-5A0A0J9YX44 114 aa9.99□□□□□ -0.81
SS18-225ENST00000585121 A6NDX4 124 aa9.99□□□□□ -0.81
SS18-225ENST00000585121 TRIM64CA6NLI5 447 aa9.99□□□□□ -0.81
SS18-225ENST00000585121 LEUTXA8MZ59 168 aa9.99□□□□□ -0.81
SS18-225ENST00000585121 MRPS14O60783 128 aaKnown RBP9.99□□□□□ -0.81
SS18-225ENST00000585121 MMP23AO75900 390 aa9.99□□□□□ -0.81
SS18-225ENST00000585121 LALBAP00709 142 aa9.99□□□□□ -0.81
SS18-225ENST00000585121 BRS3P32247 399 aa9.99□□□□□ -0.81
SS18-225ENST00000585121 CEACAM3P40198 252 aa9.99□□□□□ -0.81
SS18-225ENST00000585121 GLP1RP43220 463 aa9.99□□□□□ -0.81
SS18-225ENST00000585121 WNT4P56705 351 aa9.99□□□□□ -0.81
SS18-225ENST00000585121 GABARAPL2P60520 117 aa9.99□□□□□ -0.81
SS18-225ENST00000585121 BDH1Q02338 343 aa9.99□□□□□ -0.81
SS18-225ENST00000585121 GPR176Q14439 515 aa9.99□□□□□ -0.81
SS18-225ENST00000585121 HERPUD1Q15011 391 aa9.99□□□□□ -0.81
SS18-225ENST00000585121 ARSJQ5FYB0 599 aaPredicted RBP9.99□□□□□ -0.81
SS18-225ENST00000585121 LAIR2Q6ISS4 152 aa9.99□□□□□ -0.81
SS18-225ENST00000585121 LINC00596Q86U02 117 aa9.99□□□□□ -0.81
SS18-225ENST00000585121 ZFP41Q8N8Y5 198 aa9.99□□□□□ -0.81
SS18-225ENST00000585121 Q8NFD4 153 aa9.99□□□□□ -0.81
SS18-225ENST00000585121 OR13C5Q8NGS8 318 aa9.99□□□□□ -0.81
SS18-225ENST00000585121 CAPSLQ8WWF8 208 aa9.99□□□□□ -0.81
SS18-225ENST00000585121 PRSS22Q9GZN4 317 aa9.99□□□□□ -0.81
SS18-225ENST00000585121 MMP27Q9H306 513 aa9.99□□□□□ -0.81
SS18-225ENST00000585121 IL36GQ9NZH8 169 aa9.99□□□□□ -0.81
SS18-225ENST00000585121 SIGLEC9Q9Y336 463 aa9.99□□□□□ -0.81
SS18-225ENST00000585121 TRAV24A0A0B4J272 114 aa9.98□□□□□ -0.81
SS18-225ENST00000585121 KBTBD11-OT1A0A1B0GTJ5 212 aa9.98□□□□□ -0.81
SS18-225ENST00000585121 PNMA8CA0A1B0GUJ8 204 aa9.98□□□□□ -0.81
SS18-225ENST00000585121 CHST1O43916 411 aa9.98□□□□□ -0.81
SS18-225ENST00000585121 PEX14O75381 377 aa9.98□□□□□ -0.81
SS18-225ENST00000585121 GPX5O75715 221 aa9.98□□□□□ -0.81
SS18-225ENST00000585121 OR7C1O76099 320 aaPredicted RBP9.98□□□□□ -0.81
SS18-225ENST00000585121 CELP19835 753 aa9.98□□□□□ -0.81
SS18-225ENST00000585121 SERPINA2P20848 420 aa9.98□□□□□ -0.81
SS18-225ENST00000585121 NFYBP25208 207 aa9.98□□□□□ -0.81
SS18-225ENST00000585121 CD34P28906 385 aa9.98□□□□□ -0.81
SS18-225ENST00000585121 EFNB2P52799 333 aa9.98□□□□□ -0.81
SS18-225ENST00000585121 C2orf68Q2NKX9 166 aa9.98□□□□□ -0.81
SS18-225ENST00000585121 PIGYQ3MUY2 71 aa9.98□□□□□ -0.81
SS18-225ENST00000585121 NHLRC3Q5JS37 347 aa9.98□□□□□ -0.81
SS18-225ENST00000585121 TMEM219Q86XT9 240 aa9.98□□□□□ -0.81
SS18-225ENST00000585121 JAGN1Q8N5M9 183 aa9.98□□□□□ -0.81
SS18-225ENST00000585121 OR4P4Q8NGL7 312 aa9.98□□□□□ -0.81
SS18-225ENST00000585121 AKR1E2Q96JD6 320 aa9.98□□□□□ -0.81
SS18-225ENST00000585121 PGLYRP3Q96LB9 341 aa9.98□□□□□ -0.81
Retrieved 100 of 20,778 RNA–protein pairs in 31.8 ms