RNA–Protein interactions for RNA: ENST00000584083.5

SS18-224, Transcript of SS18, nBAF chromatin remodeling complex subunit, humanhuman

TSL 4

Gene SS18, Length 663 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SS18-224ENST00000584083 SERPINA2P20848 420 aa16.52■□□□□ 0.24
SS18-224ENST00000584083 RAB13P51153 203 aa16.52■□□□□ 0.24
SS18-224ENST00000584083 LDLRAD2Q5SZI1 272 aa16.52■□□□□ 0.24
SS18-224ENST00000584083 MINOS1Q5TGZ0 78 aa16.52■□□□□ 0.24
SS18-224ENST00000584083 SLC35E4Q6ICL7 350 aa16.52■□□□□ 0.24
SS18-224ENST00000584083 HEPN1Q6WQI6 88 aa16.52■□□□□ 0.24
SS18-224ENST00000584083 OSR2Q8N2R0 312 aa16.52■□□□□ 0.24
SS18-224ENST00000584083 OR4D6Q8NGJ1 314 aa16.52■□□□□ 0.24
SS18-224ENST00000584083 PIFOQ8TCI5 191 aa16.52■□□□□ 0.24
SS18-224ENST00000584083 MND1Q9BWT6 205 aa16.52■□□□□ 0.24
SS18-224ENST00000584083 BARHL1Q9BZE3 327 aa16.52■□□□□ 0.24
SS18-224ENST00000584083 PCDHB16Q9NRJ7 776 aa16.52■□□□□ 0.24
SS18-224ENST00000584083 IL36GQ9NZH8 169 aa16.52■□□□□ 0.24
SS18-224ENST00000584083 MINOS1-NBL1R4GNA1 71 aa16.52■□□□□ 0.24
SS18-224ENST00000584083 MEIKINA0A087WXM9 373 aa16.51■□□□□ 0.23
SS18-224ENST00000584083 FAM172BPA6NC97 362 aa16.51■□□□□ 0.23
SS18-224ENST00000584083 MAGEA13PA6NCF6 341 aa16.51■□□□□ 0.23
SS18-224ENST00000584083 ZNF729A6NN14 1252 aaPredicted RBP16.51■□□□□ 0.23
SS18-224ENST00000584083 VGLL3A8MV65 326 aa16.51■□□□□ 0.23
SS18-224ENST00000584083 FSTP19883 344 aa16.51■□□□□ 0.23
SS18-224ENST00000584083 HTR1DP28221 377 aa16.51■□□□□ 0.23
SS18-224ENST00000584083 PROK1P58294 105 aa16.51■□□□□ 0.23
SS18-224ENST00000584083 DOC2BQ14184 412 aa16.51■□□□□ 0.23
SS18-224ENST00000584083 SLC22A6Q4U2R8 563 aa16.51■□□□□ 0.23
SS18-224ENST00000584083 PRR31Q5SQ13 230 aa16.51■□□□□ 0.23
SS18-224ENST00000584083 BAIAP2L2Q6UXY1 529 aa16.51■□□□□ 0.23
SS18-224ENST00000584083 ABHD12Q8N2K0 398 aa16.51■□□□□ 0.23
SS18-224ENST00000584083 JAGN1Q8N5M9 183 aa16.51■□□□□ 0.23
SS18-224ENST00000584083 OR4C13Q8NGP0 309 aa16.51■□□□□ 0.23
SS18-224ENST00000584083 DERL3Q96Q80 235 aa16.51■□□□□ 0.23
SS18-224ENST00000584083 VCX3BQ9H321 246 aa16.51■□□□□ 0.23
SS18-224ENST00000584083 KIF25Q9UIL4 384 aa16.51■□□□□ 0.23
SS18-224ENST00000584083 ZNF780AO75290 641 aaPredicted RBP16.5■□□□□ 0.23
SS18-224ENST00000584083 OR7C1O76099 320 aaPredicted RBP16.5■□□□□ 0.23
SS18-224ENST00000584083 CD1AP06126 327 aa16.5■□□□□ 0.23
SS18-224ENST00000584083 GABRA5P31644 462 aa16.5■□□□□ 0.23
SS18-224ENST00000584083 GLP1RP43220 463 aa16.5■□□□□ 0.23
SS18-224ENST00000584083 RBM11P57052 281 aaKnown RBP16.5■□□□□ 0.23
SS18-224ENST00000584083 LIAT1Q6ZQX7 453 aa16.5■□□□□ 0.23
SS18-224ENST00000584083 RTN4RL2Q86UN3 420 aa16.5■□□□□ 0.23
SS18-224ENST00000584083 ZNF565Q8N9K5 539 aa16.5■□□□□ 0.23
SS18-224ENST00000584083 ZNF596Q8TC21 504 aa16.5■□□□□ 0.23
SS18-224ENST00000584083 THRSPQ92748 146 aa16.5■□□□□ 0.23
SS18-224ENST00000584083 CITED1Q99966 193 aa16.5■□□□□ 0.23
SS18-224ENST00000584083 FOXJ3Q9UPW0 622 aa16.5■□□□□ 0.23
SS18-224ENST00000584083 H0YHG0 523 aa16.49■□□□□ 0.23
SS18-224ENST00000584083 TOR1AO14656 332 aa16.49■□□□□ 0.23
SS18-224ENST00000584083 MAS1P04201 325 aa16.49■□□□□ 0.23
SS18-224ENST00000584083 NFYBP25208 207 aa16.49■□□□□ 0.23
SS18-224ENST00000584083 MAPK3P27361 379 aaPredicted RBP16.49■□□□□ 0.23
SS18-224ENST00000584083 GDNFP39905 211 aa16.49■□□□□ 0.23
SS18-224ENST00000584083 KCNJ3P48549 501 aa16.49■□□□□ 0.23
SS18-224ENST00000584083 KRTAP10-3P60369 221 aa16.49■□□□□ 0.23
SS18-224ENST00000584083 BDH1Q02338 343 aa16.49■□□□□ 0.23
SS18-224ENST00000584083 GPR176Q14439 515 aa16.49■□□□□ 0.23
SS18-224ENST00000584083 NHLRC3Q5JS37 347 aa16.49■□□□□ 0.23
SS18-224ENST00000584083 RNLSQ5VYX0 342 aa16.49■□□□□ 0.23
SS18-224ENST00000584083 SUMF2Q8NBJ7 301 aa16.49■□□□□ 0.23
SS18-224ENST00000584083 MUL1Q969V5 352 aa16.49■□□□□ 0.23
SS18-224ENST00000584083 DPCDQ9BVM2 203 aaPredicted RBP16.49■□□□□ 0.23
SS18-224ENST00000584083 CDCA4Q9BXL8 241 aa16.49■□□□□ 0.23
SS18-224ENST00000584083 NPFFR1Q9GZQ6 430 aa16.49■□□□□ 0.23
SS18-224ENST00000584083 ZNF581Q9P0T4 197 aa16.49■□□□□ 0.23
SS18-224ENST00000584083 TCF19Q9Y242 345 aa16.49■□□□□ 0.23
SS18-224ENST00000584083 MRPS28Q9Y2Q9 187 aaKnown RBP16.49■□□□□ 0.23
SS18-224ENST00000584083 TPRKBQ9Y3C4 175 aa16.49■□□□□ 0.23
SS18-224ENST00000584083 KBTBD11-OT1A0A1B0GTJ5 212 aa16.48■□□□□ 0.23
SS18-224ENST00000584083 F2RL2O00254 374 aa16.48■□□□□ 0.23
SS18-224ENST00000584083 GEMIN2O14893 280 aaKnown RBP16.48■□□□□ 0.23
SS18-224ENST00000584083 PIN1P1O15428 100 aa16.48■□□□□ 0.23
SS18-224ENST00000584083 CHST1O43916 411 aa16.48■□□□□ 0.23
SS18-224ENST00000584083 GTF2F2P13984 249 aa16.48■□□□□ 0.23
SS18-224ENST00000584083 JUNBP17275 347 aaPredicted RBP16.48■□□□□ 0.23
SS18-224ENST00000584083 SPHARQ15513 63 aa16.48■□□□□ 0.23
SS18-224ENST00000584083 C17orf58Q2M2W7 97 aa16.48■□□□□ 0.23
SS18-224ENST00000584083 ATAD3CQ5T2N8 411 aa16.48■□□□□ 0.23
SS18-224ENST00000584083 LINC00596Q86U02 117 aa16.48■□□□□ 0.23
SS18-224ENST00000584083 TMEM219Q86XT9 240 aa16.48■□□□□ 0.23
SS18-224ENST00000584083 PLPPR1Q8TBJ4 325 aa16.48■□□□□ 0.23
SS18-224ENST00000584083 SGCDQ92629 289 aa16.48■□□□□ 0.23
SS18-224ENST00000584083 OR5M11Q96RB7 305 aa16.48■□□□□ 0.23
SS18-224ENST00000584083 NCOR1P1Q9H4R4 102 aa16.48■□□□□ 0.23
SS18-224ENST00000584083 ZNF286AQ9HBT8 521 aa16.48■□□□□ 0.23
SS18-224ENST00000584083 TCF7L1Q9HCS4 588 aa16.48■□□□□ 0.23
SS18-224ENST00000584083 DPM3Q9P2X0 92 aa16.48■□□□□ 0.23
SS18-224ENST00000584083 FBLN5Q9UBX5 448 aa16.48■□□□□ 0.23
SS18-224ENST00000584083 PITPNC1Q9UKF7 332 aa16.48■□□□□ 0.23
SS18-224ENST00000584083 SIGLEC9Q9Y336 463 aa16.48■□□□□ 0.23
SS18-224ENST00000584083 A0A1W2PP11 408 aa16.47■□□□□ 0.23
SS18-224ENST00000584083 MYF6P23409 242 aa16.47■□□□□ 0.23
SS18-224ENST00000584083 KIR2DS4P43632 304 aa16.47■□□□□ 0.23
SS18-224ENST00000584083 PRRX1P54821 245 aa16.47■□□□□ 0.23
SS18-224ENST00000584083 MED22Q15528 200 aa16.47■□□□□ 0.23
SS18-224ENST00000584083 MPV17LQ2QL34 196 aa16.47■□□□□ 0.23
SS18-224ENST00000584083 RSBN1Q5VWQ0 802 aaPredicted RBP16.47■□□□□ 0.23
SS18-224ENST00000584083 GLIPR1L1Q6UWM5 242 aa16.47■□□□□ 0.23
SS18-224ENST00000584083 CDH26Q8IXH8 852 aa16.47■□□□□ 0.23
SS18-224ENST00000584083 MS4A15Q8N5U1 240 aa16.47■□□□□ 0.23
SS18-224ENST00000584083 OR4P4Q8NGL7 312 aa16.47■□□□□ 0.23
SS18-224ENST00000584083 OR13A1Q8NGR1 328 aa16.47■□□□□ 0.23
Retrieved 100 of 20,778 RNA–protein pairs in 38.1 ms