RNA–Protein interactions for RNA: ENST00000580986.1

CCDC47-203, Transcript of coiled-coil domain containing 47, humanhuman

TSL 4

Gene CCDC47, Length 552 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC47-203ENST00000580986 DIABLOQ9NR28 239 aa8.62□□□□□ -1.03
CCDC47-203ENST00000580986 RABL2AQ9UBK7 228 aaPredicted RBP8.62□□□□□ -1.03
CCDC47-203ENST00000580986 ADAM30Q9UKF2 790 aa8.62□□□□□ -1.03
CCDC47-203ENST00000580986 RABL2BQ9UNT1 228 aa8.62□□□□□ -1.03
CCDC47-203ENST00000580986 TRBV6-6A0A0A6YYG2 114 aa8.61□□□□□ -1.03
CCDC47-203ENST00000580986 TRAV20A0A0B4J274 112 aa8.61□□□□□ -1.03
CCDC47-203ENST00000580986 A0A1B0GW55 424 aa8.61□□□□□ -1.03
CCDC47-203ENST00000580986 SIRPB1O00241 398 aa8.61□□□□□ -1.03
CCDC47-203ENST00000580986 MFNGO00587 321 aa8.61□□□□□ -1.03
CCDC47-203ENST00000580986 SOCS1O15524 211 aa8.61□□□□□ -1.03
CCDC47-203ENST00000580986 XRCC3O43542 346 aa8.61□□□□□ -1.03
CCDC47-203ENST00000580986 RBP4P02753 201 aa8.61□□□□□ -1.03
CCDC47-203ENST00000580986 MSMBP08118 114 aa8.61□□□□□ -1.03
CCDC47-203ENST00000580986 MELTFP08582 738 aa8.61□□□□□ -1.03
CCDC47-203ENST00000580986 DUX4L2P0CJ85 424 aa8.61□□□□□ -1.03
CCDC47-203ENST00000580986 DUX4L3P0CJ86 424 aa8.61□□□□□ -1.03
CCDC47-203ENST00000580986 DUX4L4P0CJ87 422 aa8.61□□□□□ -1.03
CCDC47-203ENST00000580986 DUX4L5P0CJ88 424 aa8.61□□□□□ -1.03
CCDC47-203ENST00000580986 DUX4L6P0CJ89 424 aa8.61□□□□□ -1.03
CCDC47-203ENST00000580986 DUX4L7P0CJ90 424 aa8.61□□□□□ -1.03
CCDC47-203ENST00000580986 HIST1H1DP16402 221 aaKnown RBP8.61□□□□□ -1.03
CCDC47-203ENST00000580986 IL2RGP31785 369 aa8.61□□□□□ -1.03
CCDC47-203ENST00000580986 SNU13P55769 128 aaKnown RBP8.61□□□□□ -1.03
CCDC47-203ENST00000580986 P2RX3P56373 397 aa8.61□□□□□ -1.03
CCDC47-203ENST00000580986 PLA2G7Q13093 441 aa8.61□□□□□ -1.03
CCDC47-203ENST00000580986 GRK1Q15835 563 aa8.61□□□□□ -1.03
CCDC47-203ENST00000580986 CR1LQ2VPA4 569 aa8.61□□□□□ -1.03
CCDC47-203ENST00000580986 RSBN1Q5VWQ0 802 aaPredicted RBP8.61□□□□□ -1.03
CCDC47-203ENST00000580986 DUX4L9Q6RFH8 374 aaPredicted RBP8.61□□□□□ -1.03
CCDC47-203ENST00000580986 ZNF497Q6ZNH5 498 aa8.61□□□□□ -1.03
CCDC47-203ENST00000580986 Q6ZTK2 550 aa8.61□□□□□ -1.03
CCDC47-203ENST00000580986 BIVMQ86UB2 503 aa8.61□□□□□ -1.03
CCDC47-203ENST00000580986 KIR3DL3Q8N743 410 aa8.61□□□□□ -1.03
CCDC47-203ENST00000580986 LINC01356Q8N9X3 169 aa8.61□□□□□ -1.03
CCDC47-203ENST00000580986 OR4S1Q8NGB4 309 aa8.61□□□□□ -1.03
CCDC47-203ENST00000580986 MCFD2Q8NI22 146 aa8.61□□□□□ -1.03
CCDC47-203ENST00000580986 C15orf40Q8WUR7 153 aa8.61□□□□□ -1.03
CCDC47-203ENST00000580986 ST8SIA4Q92187 359 aa8.61□□□□□ -1.03
CCDC47-203ENST00000580986 CORO2AQ92828 525 aa8.61□□□□□ -1.03
CCDC47-203ENST00000580986 PHF21AQ96BD5 680 aa8.61□□□□□ -1.03
CCDC47-203ENST00000580986 DCUN1D5Q9BTE7 237 aa8.61□□□□□ -1.03
CCDC47-203ENST00000580986 ATG5Q9H1Y0 275 aa8.61□□□□□ -1.03
CCDC47-203ENST00000580986 PPA2Q9H2U2 334 aa8.61□□□□□ -1.03
CCDC47-203ENST00000580986 NARFLQ9H6Q4 476 aa8.61□□□□□ -1.03
CCDC47-203ENST00000580986 PLEKHJ1Q9NW61 149 aa8.61□□□□□ -1.03
CCDC47-203ENST00000580986 OR6C3Q9NZP0 311 aa8.61□□□□□ -1.03
CCDC47-203ENST00000580986 COMMD3Q9UBI1 195 aa8.61□□□□□ -1.03
CCDC47-203ENST00000580986 DUX4Q9UBX2 424 aa8.61□□□□□ -1.03
CCDC47-203ENST00000580986 RPUSD1Q9UJJ7 312 aaKnown RBP8.61□□□□□ -1.03
CCDC47-203ENST00000580986 ITGB1BP2Q9UKP3 347 aa8.61□□□□□ -1.03
CCDC47-203ENST00000580986 PEX16Q9Y5Y5 336 aa8.61□□□□□ -1.03
CCDC47-203ENST00000580986 LINC00312Q9Y6C7 94 aa8.61□□□□□ -1.03
CCDC47-203ENST00000580986 DOCK11Q5JSL3 2073 aa8.61□□□□□ -1.03
CCDC47-203ENST00000580986 DSCAML1Q8TD84 2053 aa8.61□□□□□ -1.03
CCDC47-203ENST00000580986 MALRD1Q5VYJ5 2156 aa8.61□□□□□ -1.03
CCDC47-203ENST00000580986 ZNF469Q96JG9 3925 aaPredicted RBP8.61□□□□□ -1.03
CCDC47-203ENST00000580986 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP8.6□□□□□ -1.031e-6■■□□□ 14.5
CCDC47-203ENST00000580986 CELSR1Q9NYQ6 3014 aa8.6□□□□□ -1.03
CCDC47-203ENST00000580986 ABCA2Q9BZC7 2435 aa8.6□□□□□ -1.03
CCDC47-203ENST00000580986 LOC105371242A0A075B767 164 aa8.6□□□□□ -1.03
CCDC47-203ENST00000580986 A0A1W2PPH5 198 aa8.6□□□□□ -1.03
CCDC47-203ENST00000580986 hADV38S2A0JD32 116 aa8.6□□□□□ -1.03
CCDC47-203ENST00000580986 TMEM30CPA0ZSE6 113 aa8.6□□□□□ -1.03
CCDC47-203ENST00000580986 FAM157AC9JC47 383 aa8.6□□□□□ -1.03
CCDC47-203ENST00000580986 ENSAO43768 121 aaKnown RBP8.6□□□□□ -1.03
CCDC47-203ENST00000580986 NAPSAO96009 420 aa8.6□□□□□ -1.03
CCDC47-203ENST00000580986 PPIAL4GP0DN37 164 aa8.6□□□□□ -1.03
CCDC47-203ENST00000580986 IGHV4-31P0DP07 118 aa8.6□□□□□ -1.03
CCDC47-203ENST00000580986 SELLP14151 372 aa8.6□□□□□ -1.03
CCDC47-203ENST00000580986 DVL1P1P54792 670 aaPredicted RBP8.6□□□□□ -1.03
CCDC47-203ENST00000580986 SEC61A1P61619 476 aaKnown RBP8.6□□□□□ -1.03
CCDC47-203ENST00000580986 RPL31P62899 125 aaKnown RBP8.6□□□□□ -1.03
CCDC47-203ENST00000580986 PITPNAQ00169 270 aa8.6□□□□□ -1.03
CCDC47-203ENST00000580986 SCN1BQ07699 218 aa8.6□□□□□ -1.03
CCDC47-203ENST00000580986 SRSF7Q16629 238 aaKnown RBP eCLIP8.6□□□□□ -1.03
CCDC47-203ENST00000580986 PNLIPRP3Q17RR3 467 aa8.6□□□□□ -1.03
CCDC47-203ENST00000580986 PLAC9Q5JTB6 97 aa8.6□□□□□ -1.03
CCDC47-203ENST00000580986 ATAD3CQ5T2N8 411 aa8.6□□□□□ -1.03
CCDC47-203ENST00000580986 TRAT1Q6PIZ9 186 aa8.6□□□□□ -1.03
CCDC47-203ENST00000580986 BAIAP2L2Q6UXY1 529 aa8.6□□□□□ -1.03
CCDC47-203ENST00000580986 C1orf122Q6ZSJ8 110 aa8.6□□□□□ -1.03
CCDC47-203ENST00000580986 BTN2A1Q7KYR7 527 aa8.6□□□□□ -1.03
CCDC47-203ENST00000580986 C6orf201Q7Z4U5 140 aa8.6□□□□□ -1.03
CCDC47-203ENST00000580986 CMTM4Q8IZR5 234 aa8.6□□□□□ -1.03
CCDC47-203ENST00000580986 COQ2Q96H96 371 aa8.6□□□□□ -1.03
CCDC47-203ENST00000580986 C18orf12Q96KH6 178 aa8.6□□□□□ -1.03
CCDC47-203ENST00000580986 PECRQ9BY49 303 aa8.6□□□□□ -1.03
CCDC47-203ENST00000580986 LINC00574Q9H8X3 128 aa8.6□□□□□ -1.03
CCDC47-203ENST00000580986 MBNL3Q9NUK0 354 aaKnown RBP8.6□□□□□ -1.03
CCDC47-203ENST00000580986 PTTG2Q9NZH5 202 aa8.6□□□□□ -1.03
CCDC47-203ENST00000580986 ZNF581Q9P0T4 197 aa8.6□□□□□ -1.03
CCDC47-203ENST00000580986 OPN4Q9UHM6 478 aa8.6□□□□□ -1.03
CCDC47-203ENST00000580986 MGAT4AQ9UM21 535 aa8.6□□□□□ -1.03
CCDC47-203ENST00000580986 KCNK7Q9Y2U2 307 aa8.6□□□□□ -1.03
CCDC47-203ENST00000580986 UBE2J1Q9Y385 318 aaPredicted RBP8.6□□□□□ -1.03
CCDC47-203ENST00000580986 FLNAP21333 2647 aaKnown RBP8.6□□□□□ -1.03
CCDC47-203ENST00000580986 IGHV2-70DA0A0C4DH43 119 aa8.59□□□□□ -1.03
CCDC47-203ENST00000580986 KIR2DS1A0A191URI9 304 aa8.59□□□□□ -1.03
CCDC47-203ENST00000580986 ODAMA1E959 279 aa8.59□□□□□ -1.03
CCDC47-203ENST00000580986 CYSRT1A8MQ03 144 aa8.59□□□□□ -1.03
Retrieved 100 of 20,778 RNA–protein pairs in 47.2 ms