RNA–Protein interactions for RNA: ENST00000578733.5

CDK5RAP3-210, Transcript of CDK5 regulatory subunit associated protein 3, humanhuman

TSL 2

Gene CDK5RAP3, Length 578 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDK5RAP3-210ENST00000578733 OR3A1P47881 315 aa9.36□□□□□ -0.91
CDK5RAP3-210ENST00000578733 EFNB2P52799 333 aa9.36□□□□□ -0.91
CDK5RAP3-210ENST00000578733 MEF2CQ06413 473 aaPredicted RBP9.36□□□□□ -0.91
CDK5RAP3-210ENST00000578733 EDDM3AQ14507 147 aa9.36□□□□□ -0.91
CDK5RAP3-210ENST00000578733 ATXN7L3Q14CW9 347 aaPredicted RBP9.36□□□□□ -0.91
CDK5RAP3-210ENST00000578733 PDCD1Q15116 288 aa9.36□□□□□ -0.91
CDK5RAP3-210ENST00000578733 KRBOX4Q5JUW0 171 aa9.36□□□□□ -0.91
CDK5RAP3-210ENST00000578733 ZNF841Q6ZN19 808 aa9.36□□□□□ -0.91
CDK5RAP3-210ENST00000578733 C17orf107Q6ZR85 190 aa9.36□□□□□ -0.91
CDK5RAP3-210ENST00000578733 BTN2A1Q7KYR7 527 aa9.36□□□□□ -0.91
CDK5RAP3-210ENST00000578733 GLCCI1Q86VQ1 547 aa9.36□□□□□ -0.91
CDK5RAP3-210ENST00000578733 CMTM4Q8IZR5 234 aa9.36□□□□□ -0.91
CDK5RAP3-210ENST00000578733 OR5H6Q8NGV6 325 aa9.36□□□□□ -0.91
CDK5RAP3-210ENST00000578733 C15orf40Q8WUR7 153 aa9.36□□□□□ -0.91
CDK5RAP3-210ENST00000578733 C1orf159Q96HA4 380 aa9.36□□□□□ -0.91
CDK5RAP3-210ENST00000578733 C18orf12Q96KH6 178 aa9.36□□□□□ -0.91
CDK5RAP3-210ENST00000578733 SLIRPQ9GZT3 109 aaKnown RBP9.36□□□□□ -0.91
CDK5RAP3-210ENST00000578733 CHST6Q9GZX3 395 aa9.36□□□□□ -0.91
CDK5RAP3-210ENST00000578733 RIMS4Q9H426 269 aaPredicted RBP9.36□□□□□ -0.91
CDK5RAP3-210ENST00000578733 RAB9BQ9NP90 201 aa9.36□□□□□ -0.91
CDK5RAP3-210ENST00000578733 TRGV10A0A0A0MS01 117 aa9.35□□□□□ -0.91
CDK5RAP3-210ENST00000578733 PPIAL4CA0A0B4J2A2 164 aa9.35□□□□□ -0.91
CDK5RAP3-210ENST00000578733 A0A0G2JMP0 313 aa9.35□□□□□ -0.91
CDK5RAP3-210ENST00000578733 A0A0X1KG70 313 aa9.35□□□□□ -0.91
CDK5RAP3-210ENST00000578733 A0A1B0GW55 424 aa9.35□□□□□ -0.91
CDK5RAP3-210ENST00000578733 hCG_1809904A0A1W2PP81 198 aa9.35□□□□□ -0.91
CDK5RAP3-210ENST00000578733 A0A1W2PPE2 198 aa9.35□□□□□ -0.91
CDK5RAP3-210ENST00000578733 A0A1W2PR64 198 aa9.35□□□□□ -0.91
CDK5RAP3-210ENST00000578733 A0A1W2PRV1 198 aa9.35□□□□□ -0.91
CDK5RAP3-210ENST00000578733 TMEM30CPA0ZSE6 113 aa9.35□□□□□ -0.91
CDK5RAP3-210ENST00000578733 FAM157AC9JC47 383 aa9.35□□□□□ -0.91
CDK5RAP3-210ENST00000578733 SOCS1O15524 211 aa9.35□□□□□ -0.91
CDK5RAP3-210ENST00000578733 PHF1O43189 567 aaPredicted RBP9.35□□□□□ -0.91
CDK5RAP3-210ENST00000578733 PSPNO60542 156 aa9.35□□□□□ -0.91
CDK5RAP3-210ENST00000578733 HPGDSO60760 199 aa9.35□□□□□ -0.91
CDK5RAP3-210ENST00000578733 TFF1P04155 84 aa9.35□□□□□ -0.91
CDK5RAP3-210ENST00000578733 MSMBP08118 114 aa9.35□□□□□ -0.91
CDK5RAP3-210ENST00000578733 GSTP1P09211 210 aaKnown RBP9.35□□□□□ -0.91
CDK5RAP3-210ENST00000578733 CD3GP09693 182 aa9.35□□□□□ -0.91
CDK5RAP3-210ENST00000578733 DUX4L2P0CJ85 424 aa9.35□□□□□ -0.91
CDK5RAP3-210ENST00000578733 DUX4L3P0CJ86 424 aa9.35□□□□□ -0.91
CDK5RAP3-210ENST00000578733 DUX4L4P0CJ87 422 aa9.35□□□□□ -0.91
CDK5RAP3-210ENST00000578733 DUX4L5P0CJ88 424 aa9.35□□□□□ -0.91
CDK5RAP3-210ENST00000578733 DUX4L6P0CJ89 424 aa9.35□□□□□ -0.91
CDK5RAP3-210ENST00000578733 DUX4L7P0CJ90 424 aa9.35□□□□□ -0.91
CDK5RAP3-210ENST00000578733 GATA3P23771 443 aa9.35□□□□□ -0.91
CDK5RAP3-210ENST00000578733 IL2RGP31785 369 aa9.35□□□□□ -0.91
CDK5RAP3-210ENST00000578733 P2RX3P56373 397 aa9.35□□□□□ -0.91
CDK5RAP3-210ENST00000578733 SEC61A1P61619 476 aaKnown RBP9.35□□□□□ -0.91
CDK5RAP3-210ENST00000578733 RPL31P62899 125 aaKnown RBP9.35□□□□□ -0.91
CDK5RAP3-210ENST00000578733 LCN2P80188 198 aa9.35□□□□□ -0.91
CDK5RAP3-210ENST00000578733 PAX5Q02548 391 aa9.35□□□□□ -0.91
CDK5RAP3-210ENST00000578733 PNLIPRP3Q17RR3 467 aa9.35□□□□□ -0.91
CDK5RAP3-210ENST00000578733 TMEM69Q5SWH9 247 aa9.35□□□□□ -0.91
CDK5RAP3-210ENST00000578733 TRAT1Q6PIZ9 186 aa9.35□□□□□ -0.91
CDK5RAP3-210ENST00000578733 DUX4L9Q6RFH8 374 aaPredicted RBP9.35□□□□□ -0.91
CDK5RAP3-210ENST00000578733 BAIAP2L2Q6UXY1 529 aa9.35□□□□□ -0.91
CDK5RAP3-210ENST00000578733 TRAPPC6BQ86SZ2 158 aa9.35□□□□□ -0.91
CDK5RAP3-210ENST00000578733 BIVMQ86UB2 503 aa9.35□□□□□ -0.91
CDK5RAP3-210ENST00000578733 FAM185AQ8N0U4 392 aa9.35□□□□□ -0.91
CDK5RAP3-210ENST00000578733 BPIFB2Q8N4F0 458 aa9.35□□□□□ -0.91
CDK5RAP3-210ENST00000578733 OR4S1Q8NGB4 309 aa9.35□□□□□ -0.91
CDK5RAP3-210ENST00000578733 OR4M2Q8NGB6 313 aa9.35□□□□□ -0.91
CDK5RAP3-210ENST00000578733 ARHGAP5-AS1Q96IT6 56 aa9.35□□□□□ -0.91
CDK5RAP3-210ENST00000578733 COX4I2Q96KJ9 171 aa9.35□□□□□ -0.91
CDK5RAP3-210ENST00000578733 DCTN5Q9BTE1 182 aa9.35□□□□□ -0.91
CDK5RAP3-210ENST00000578733 SHARPINQ9H0F6 387 aa9.35□□□□□ -0.91
CDK5RAP3-210ENST00000578733 NCOR1P1Q9H4R4 102 aa9.35□□□□□ -0.91
CDK5RAP3-210ENST00000578733 CHMP1AQ9HD42 196 aaPredicted RBP9.35□□□□□ -0.91
CDK5RAP3-210ENST00000578733 OR6C3Q9NZP0 311 aa9.35□□□□□ -0.91
CDK5RAP3-210ENST00000578733 DUX4Q9UBX2 424 aa9.35□□□□□ -0.91
CDK5RAP3-210ENST00000578733 POLR3KQ9Y2Y1 108 aaPredicted RBP9.35□□□□□ -0.91
CDK5RAP3-210ENST00000578733 ABCA1O95477 2261 aa9.35□□□□□ -0.91
CDK5RAP3-210ENST00000578733 A0A0A6YYD4 124 aa9.34□□□□□ -0.91
CDK5RAP3-210ENST00000578733 UBE2QL1A1L167 161 aa9.34□□□□□ -0.91
CDK5RAP3-210ENST00000578733 POM121CA8CG34 1229 aa9.34□□□□□ -0.91
CDK5RAP3-210ENST00000578733 RAB27BO00194 218 aa9.34□□□□□ -0.91
CDK5RAP3-210ENST00000578733 XRCC3O43542 346 aa9.34□□□□□ -0.91
CDK5RAP3-210ENST00000578733 CLPXO76031 633 aa9.34□□□□□ -0.91
CDK5RAP3-210ENST00000578733 INHBBP09529 407 aa9.34□□□□□ -0.91
CDK5RAP3-210ENST00000578733 SELLP14151 372 aa9.34□□□□□ -0.91
CDK5RAP3-210ENST00000578733 HIST1H1DP16402 221 aaKnown RBP9.34□□□□□ -0.91
CDK5RAP3-210ENST00000578733 DVL1P1P54792 670 aaPredicted RBP9.34□□□□□ -0.91
CDK5RAP3-210ENST00000578733 PITPNAQ00169 270 aa9.34□□□□□ -0.91
CDK5RAP3-210ENST00000578733 AESQ08117 197 aa9.34□□□□□ -0.91
CDK5RAP3-210ENST00000578733 ARFRP1Q13795 201 aa9.34□□□□□ -0.91
CDK5RAP3-210ENST00000578733 C6orf183Q5T699 404 aa9.34□□□□□ -0.91
CDK5RAP3-210ENST00000578733 SLC35E4Q6ICL7 350 aa9.34□□□□□ -0.91
CDK5RAP3-210ENST00000578733 LINC00299Q6ZSB3 139 aa9.34□□□□□ -0.91
CDK5RAP3-210ENST00000578733 MOB1BQ7L9L4 216 aa9.34□□□□□ -0.91
CDK5RAP3-210ENST00000578733 C6orf201Q7Z4U5 140 aa9.34□□□□□ -0.91
CDK5RAP3-210ENST00000578733 ZNF565Q8N9K5 539 aa9.34□□□□□ -0.91
CDK5RAP3-210ENST00000578733 MAPK1IP1LQ8NDC0 245 aa9.34□□□□□ -0.91
CDK5RAP3-210ENST00000578733 C8orf46Q8TAG6 207 aa9.34□□□□□ -0.91
CDK5RAP3-210ENST00000578733 SLC25A38Q96DW6 304 aa9.34□□□□□ -0.91
CDK5RAP3-210ENST00000578733 CMSS1Q9BQ75 279 aaKnown RBP9.34□□□□□ -0.91
CDK5RAP3-210ENST00000578733 PECRQ9BY49 303 aa9.34□□□□□ -0.91
CDK5RAP3-210ENST00000578733 GAL3ST2Q9H3Q3 398 aa9.34□□□□□ -0.91
CDK5RAP3-210ENST00000578733 LPAR2Q9HBW0 351 aa9.34□□□□□ -0.91
CDK5RAP3-210ENST00000578733 EXOSC5Q9NQT4 235 aaKnown RBP eCLIP9.34□□□□□ -0.91
Retrieved 100 of 20,778 RNA–protein pairs in 48.7 ms