RNA–Protein interactions for RNA: ENST00000575112.5

RPAIN-215, Transcript of RPA interacting protein, humanhuman

TSL 2

Gene RPAIN, Length 3,817 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPAIN-215ENST00000575112 OR2Y1Q8NGV0 311 aa7.39□□□□□ -1.23
RPAIN-215ENST00000575112 RBMXL1Q96E39 390 aaKnown RBP7.39□□□□□ -1.23
RPAIN-215ENST00000575112 C2orf50Q96LR7 162 aa7.39□□□□□ -1.23
RPAIN-215ENST00000575112 SCGB3A2Q96PL1 93 aa7.39□□□□□ -1.23
RPAIN-215ENST00000575112 PECRQ9BY49 303 aa7.39□□□□□ -1.23
RPAIN-215ENST00000575112 TGIF2Q9GZN2 237 aa7.39□□□□□ -1.23
RPAIN-215ENST00000575112 ABI3Q9P2A4 366 aa7.39□□□□□ -1.23
RPAIN-215ENST00000575112 TGIF2-C20orf24A0A0A6YYL0 155 aa7.39□□□□□ -1.23
RPAIN-215ENST00000575112 AQP7P3A6NL99 342 aa7.39□□□□□ -1.23
RPAIN-215ENST00000575112 NDUFB7P17568 137 aa7.39□□□□□ -1.23
RPAIN-215ENST00000575112 MLF1P58340 268 aa7.39□□□□□ -1.23
RPAIN-215ENST00000575112 ERVFRD-1P60508 538 aa7.39□□□□□ -1.23
RPAIN-215ENST00000575112 TIPARPQ7Z3E1 657 aaKnown RBP7.39□□□□□ -1.23
RPAIN-215ENST00000575112 KMT5CQ86Y97 462 aa7.39□□□□□ -1.23
RPAIN-215ENST00000575112 OR10D4PQ8NGN7 298 aa7.39□□□□□ -1.23
RPAIN-215ENST00000575112 ASB13Q8WXK3 278 aa7.39□□□□□ -1.23
RPAIN-215ENST00000575112 TWSG1Q9GZX9 223 aa7.39□□□□□ -1.23
RPAIN-215ENST00000575112 SLC7A10Q9NS82 523 aa7.39□□□□□ -1.23
RPAIN-215ENST00000575112 MAP1AP78559 2803 aaPredicted RBP7.39□□□□□ -1.23
RPAIN-215ENST00000575112 DMXL2Q8TDJ6 3036 aa7.39□□□□□ -1.23
RPAIN-215ENST00000575112 CSMD1Q96PZ7 3565 aa7.39□□□□□ -1.23
RPAIN-215ENST00000575112 PINLYPA6NC86 204 aa7.39□□□□□ -1.23
RPAIN-215ENST00000575112 AP4M1O00189 453 aa7.39□□□□□ -1.23
RPAIN-215ENST00000575112 ZIC3O60481 467 aa7.39□□□□□ -1.23
RPAIN-215ENST00000575112 TUSC2O75896 110 aa7.39□□□□□ -1.23
RPAIN-215ENST00000575112 DHRS3O75911 302 aa7.39□□□□□ -1.23
RPAIN-215ENST00000575112 MBPP02686 304 aaPredicted RBP7.39□□□□□ -1.23
RPAIN-215ENST00000575112 SOD3P08294 240 aa7.39□□□□□ -1.23
RPAIN-215ENST00000575112 PSG4Q00888 419 aa7.39□□□□□ -1.23
RPAIN-215ENST00000575112 KIAA0141Q14154 515 aaPredicted RBP7.39□□□□□ -1.23
RPAIN-215ENST00000575112 EDDM3AQ14507 147 aa7.39□□□□□ -1.23
RPAIN-215ENST00000575112 PMS2CLQ68D20 193 aa7.39□□□□□ -1.23
RPAIN-215ENST00000575112 ARRDC1Q8N5I2 433 aa7.39□□□□□ -1.23
RPAIN-215ENST00000575112 ZFP62Q8NB50 900 aaPredicted RBP7.39□□□□□ -1.23
RPAIN-215ENST00000575112 OBP2BQ9NPH6 170 aa7.39□□□□□ -1.23
RPAIN-215ENST00000575112 DOK5Q9P104 306 aa7.39□□□□□ -1.23
RPAIN-215ENST00000575112 DEFB108AA8MXU0 73 aa7.38□□□□□ -1.23
RPAIN-215ENST00000575112 SSSCA1O60232 199 aa7.38□□□□□ -1.23
RPAIN-215ENST00000575112 S100A8P05109 93 aa7.38□□□□□ -1.23
RPAIN-215ENST00000575112 IAPPP10997 89 aa7.38□□□□□ -1.23
RPAIN-215ENST00000575112 CD37P11049 281 aa7.38□□□□□ -1.23
RPAIN-215ENST00000575112 NR2C1P13056 603 aa7.38□□□□□ -1.23
RPAIN-215ENST00000575112 GAMTQ14353 236 aa7.38□□□□□ -1.23
RPAIN-215ENST00000575112 GNMTQ14749 295 aa7.38□□□□□ -1.23
RPAIN-215ENST00000575112 OR1C1Q15619 314 aa7.38□□□□□ -1.23
RPAIN-215ENST00000575112 EXT1Q16394 746 aa7.38□□□□□ -1.23
RPAIN-215ENST00000575112 GGNBP1Q5YKI7 109 aa7.38□□□□□ -1.23
RPAIN-215ENST00000575112 MKXQ8IYA7 352 aa7.38□□□□□ -1.23
RPAIN-215ENST00000575112 C14orf144Q96I85 54 aa7.38□□□□□ -1.23
RPAIN-215ENST00000575112 CNTNAP3Q9BZ76 1288 aa7.38□□□□□ -1.23
RPAIN-215ENST00000575112 RAB18Q9NP72 206 aa7.38□□□□□ -1.23
RPAIN-215ENST00000575112 STARD10Q9Y365 291 aa7.38□□□□□ -1.23
RPAIN-215ENST00000575112 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP7.38□□□□□ -1.231e-8■■■□□ 16.6
RPAIN-215ENST00000575112 SMCO3A2RU48 225 aa7.38□□□□□ -1.23
RPAIN-215ENST00000575112 TRAPPC2LH3BP13 241 aa7.38□□□□□ -1.23
RPAIN-215ENST00000575112 IGLV3-19P01714 112 aa7.38□□□□□ -1.23
RPAIN-215ENST00000575112 S100PP25815 95 aa7.38□□□□□ -1.23
RPAIN-215ENST00000575112 OR2V1Q8NHB1 315 aa7.38□□□□□ -1.23
RPAIN-215ENST00000575112 CA5BP1Q8WTZ4 195 aa7.38□□□□□ -1.23
RPAIN-215ENST00000575112 LYZL4Q96KX0 146 aa7.38□□□□□ -1.23
RPAIN-215ENST00000575112 SIGLEC12Q96PQ1 595 aa7.38□□□□□ -1.23
RPAIN-215ENST00000575112 PRDM13Q9H4Q3 707 aa7.38□□□□□ -1.23
RPAIN-215ENST00000575112 DEPPQ9NTK1 212 aa7.38□□□□□ -1.23
RPAIN-215ENST00000575112 PILRBQ9UKJ0 227 aa7.38□□□□□ -1.23
RPAIN-215ENST00000575112 OSGIN2Q9Y236 505 aa7.38□□□□□ -1.23
RPAIN-215ENST00000575112 OTOGLQ3ZCN5 2332 aa7.38□□□□□ -1.23
RPAIN-215ENST00000575112 IGHV1-45A0A0A0MS14 117 aa7.38□□□□□ -1.23
RPAIN-215ENST00000575112 FAM24AA6NFZ4 105 aa7.38□□□□□ -1.23
RPAIN-215ENST00000575112 TMEM127O75204 238 aa7.38□□□□□ -1.23
RPAIN-215ENST00000575112 AGFG2O95081 481 aa7.38□□□□□ -1.23
RPAIN-215ENST00000575112 COX6A1P12074 109 aa7.38□□□□□ -1.23
RPAIN-215ENST00000575112 SURF2Q15527 256 aaPredicted RBP7.38□□□□□ -1.23
RPAIN-215ENST00000575112 ZNF529Q6P280 563 aa7.38□□□□□ -1.23
RPAIN-215ENST00000575112 HIST2H3AQ71DI3 136 aa7.38□□□□□ -1.23
RPAIN-215ENST00000575112 DEFB108BQ8NET1 73 aa7.38□□□□□ -1.23
RPAIN-215ENST00000575112 Q8WTZ3 238 aa7.38□□□□□ -1.23
RPAIN-215ENST00000575112 INTS12Q96CB8 462 aaKnown RBP7.38□□□□□ -1.23
RPAIN-215ENST00000575112 NTNG2Q96CW9 530 aa7.38□□□□□ -1.23
RPAIN-215ENST00000575112 SAT2Q96F10 170 aaPredicted RBP7.38□□□□□ -1.23
RPAIN-215ENST00000575112 TOLLIPQ9H0E2 274 aa7.38□□□□□ -1.23
RPAIN-215ENST00000575112 FOXJ2Q9P0K8 574 aa7.38□□□□□ -1.23
RPAIN-215ENST00000575112 B4GALT7Q9UBV7 327 aa7.38□□□□□ -1.23
RPAIN-215ENST00000575112 LYL1P12980 280 aa7.37□□□□□ -1.23
RPAIN-215ENST00000575112 STARD6P59095 220 aa7.37□□□□□ -1.23
RPAIN-215ENST00000575112 RAC1P63000 192 aa7.37□□□□□ -1.23
RPAIN-215ENST00000575112 EIF5AP63241 154 aaKnown RBP7.37□□□□□ -1.23
RPAIN-215ENST00000575112 SLC25A47Q6Q0C1 308 aa7.37□□□□□ -1.23
RPAIN-215ENST00000575112 SSX9Q7RTT3 188 aa7.37□□□□□ -1.23
RPAIN-215ENST00000575112 LHFPL1Q86WI0 220 aa7.37□□□□□ -1.23
RPAIN-215ENST00000575112 LILRB2Q8N423 598 aa7.37□□□□□ -1.23
RPAIN-215ENST00000575112 OR10AD1Q8NGE0 317 aa7.37□□□□□ -1.23
RPAIN-215ENST00000575112 OR14K1Q8NGZ2 314 aa7.37□□□□□ -1.23
RPAIN-215ENST00000575112 PSMF1Q92530 271 aa7.37□□□□□ -1.23
RPAIN-215ENST00000575112 PRRX2Q99811 253 aa7.37□□□□□ -1.23
RPAIN-215ENST00000575112 LRP4O75096 1905 aa7.37□□□□□ -1.23
RPAIN-215ENST00000575112 SPAARA0A1B0GVQ0 90 aa7.37□□□□□ -1.23
RPAIN-215ENST00000575112 GJE1A6NN92 205 aa7.37□□□□□ -1.23
RPAIN-215ENST00000575112 OR2C1O95371 312 aa7.37□□□□□ -1.23
RPAIN-215ENST00000575112 CST4P01036 141 aa7.37□□□□□ -1.23
RPAIN-215ENST00000575112 ISG15P05161 165 aa7.37□□□□□ -1.23
Retrieved 100 of 20,778 RNA–protein pairs in 40 ms