RNA–Protein interactions for RNA: ENST00000574867.5

NUP88-210, Transcript of nucleoporin 88, humanhuman

TSL 2

Gene NUP88, Length 2,081 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP88-210ENST00000574867 TGFAP01135 160 aa14.13□□□□□ -0.15
NUP88-210ENST00000574867 RPL31P62899 125 aaKnown RBP14.13□□□□□ -0.15
NUP88-210ENST00000574867 PAX2Q02962 417 aa14.13□□□□□ -0.15
NUP88-210ENST00000574867 BTNL3Q6UXE8 466 aa14.13□□□□□ -0.15
NUP88-210ENST00000574867 BPIFB2Q8N4F0 458 aa14.13□□□□□ -0.15
NUP88-210ENST00000574867 SAMD12Q8N8I0 201 aa14.13□□□□□ -0.15
NUP88-210ENST00000574867 DACT3Q96B18 629 aaPredicted RBP14.13□□□□□ -0.15
NUP88-210ENST00000574867 PHF21AQ96BD5 680 aa14.13□□□□□ -0.15
NUP88-210ENST00000574867 NUDT16L1Q9BRJ7 211 aaKnown RBP14.13□□□□□ -0.15
NUP88-210ENST00000574867 MED13LQ71F56 2210 aa14.13□□□□□ -0.15
NUP88-210ENST00000574867 A0A0A6YYH2 397 aa14.13□□□□□ -0.15
NUP88-210ENST00000574867 A6NJ64 397 aa14.13□□□□□ -0.15
NUP88-210ENST00000574867 SOCS1O15524 211 aa14.13□□□□□ -0.15
NUP88-210ENST00000574867 LIPFP07098 398 aa14.13□□□□□ -0.15
NUP88-210ENST00000574867 MEF2CQ06413 473 aaPredicted RBP14.13□□□□□ -0.15
NUP88-210ENST00000574867 KRTAP1-1Q07627 177 aa14.13□□□□□ -0.15
NUP88-210ENST00000574867 KRBOX4Q5JUW0 171 aa14.13□□□□□ -0.15
NUP88-210ENST00000574867 METAP1DQ6UB28 335 aaPredicted RBP14.13□□□□□ -0.15
NUP88-210ENST00000574867 LY6G5BQ8NDX9 201 aa14.13□□□□□ -0.15
NUP88-210ENST00000574867 OR10R2Q8NGX6 335 aa14.13□□□□□ -0.15
NUP88-210ENST00000574867 ABCG5Q9H222 651 aa14.13□□□□□ -0.15
NUP88-210ENST00000574867 NCOR1P1Q9H4R4 102 aa14.13□□□□□ -0.15
NUP88-210ENST00000574867 PLEKHJ1Q9NW61 149 aa14.13□□□□□ -0.15
NUP88-210ENST00000574867 HIF1ANQ9NWT6 349 aa14.13□□□□□ -0.15
NUP88-210ENST00000574867 COMMD3Q9UBI1 195 aa14.13□□□□□ -0.15
NUP88-210ENST00000574867 ZNF469Q96JG9 3925 aaPredicted RBP14.12□□□□□ -0.15
NUP88-210ENST00000574867 CELSR1Q9NYQ6 3014 aa14.12□□□□□ -0.15
NUP88-210ENST00000574867 A0A0G2JMP0 313 aa14.12□□□□□ -0.15
NUP88-210ENST00000574867 A0A0X1KG70 313 aa14.12□□□□□ -0.15
NUP88-210ENST00000574867 A0A1W2PQ09 198 aa14.12□□□□□ -0.15
NUP88-210ENST00000574867 RAB27BO00194 218 aa14.12□□□□□ -0.15
NUP88-210ENST00000574867 ARL6IP1Q15041 203 aa14.12□□□□□ -0.15
NUP88-210ENST00000574867 FOXB2Q5VYV0 432 aa14.12□□□□□ -0.15
NUP88-210ENST00000574867 BIVMQ86UB2 503 aa14.12□□□□□ -0.15
NUP88-210ENST00000574867 OR4M2Q8NGB6 313 aa14.12□□□□□ -0.15
NUP88-210ENST00000574867 RAB3CQ96E17 227 aa14.12□□□□□ -0.15
NUP88-210ENST00000574867 COQ2Q96H96 371 aa14.12□□□□□ -0.15
NUP88-210ENST00000574867 C19orf12Q9NSK7 152 aa14.12□□□□□ -0.15
NUP88-210ENST00000574867 KIR2DS1A0A191URI9 304 aa14.11□□□□□ -0.15
NUP88-210ENST00000574867 A0A1W2PPH5 198 aa14.11□□□□□ -0.15
NUP88-210ENST00000574867 hADV38S2A0JD32 116 aa14.11□□□□□ -0.15
NUP88-210ENST00000574867 PPIAL4GP0DN37 164 aa14.11□□□□□ -0.15
NUP88-210ENST00000574867 AESQ08117 197 aa14.11□□□□□ -0.15
NUP88-210ENST00000574867 DCAF12L2Q5VW00 463 aa14.11□□□□□ -0.15
NUP88-210ENST00000574867 RSBN1Q5VWQ0 802 aaPredicted RBP14.11□□□□□ -0.15
NUP88-210ENST00000574867 SLC35E4Q6ICL7 350 aa14.11□□□□□ -0.15
NUP88-210ENST00000574867 Q6ZTK2 550 aa14.11□□□□□ -0.15
NUP88-210ENST00000574867 C6orf201Q7Z4U5 140 aa14.11□□□□□ -0.15
NUP88-210ENST00000574867 PLPPR1Q8TBJ4 325 aa14.11□□□□□ -0.15
NUP88-210ENST00000574867 ETAA1Q9NY74 926 aa14.11□□□□□ -0.15
NUP88-210ENST00000574867 INSIG2Q9Y5U4 225 aa14.11□□□□□ -0.15
NUP88-210ENST00000574867 ACANP16112 2415 aa14.11□□□□□ -0.15
NUP88-210ENST00000574867 TMEM30CPA0ZSE6 113 aa14.11□□□□□ -0.15
NUP88-210ENST00000574867 A6NHS1 94 aa14.11□□□□□ -0.15
NUP88-210ENST00000574867 TMEM50BP56557 158 aa14.11□□□□□ -0.15
NUP88-210ENST00000574867 MOGAT2Q3SYC2 334 aa14.11□□□□□ -0.15
NUP88-210ENST00000574867 BRICD5Q6PL45 260 aa14.11□□□□□ -0.15
NUP88-210ENST00000574867 FAM185AQ8N0U4 392 aa14.11□□□□□ -0.15
NUP88-210ENST00000574867 OR4M1Q8NGD0 313 aa14.11□□□□□ -0.15
NUP88-210ENST00000574867 ARHGAP5-AS1Q96IT6 56 aa14.11□□□□□ -0.15
NUP88-210ENST00000574867 SULT4A1Q9BR01 284 aa14.11□□□□□ -0.15
NUP88-210ENST00000574867 DCUN1D5Q9BTE7 237 aa14.11□□□□□ -0.15
NUP88-210ENST00000574867 SLIRPQ9GZT3 109 aaKnown RBP14.11□□□□□ -0.15
NUP88-210ENST00000574867 MMP26Q9NRE1 261 aa14.11□□□□□ -0.15
NUP88-210ENST00000574867 LINC00312Q9Y6C7 94 aa14.11□□□□□ -0.15
NUP88-210ENST00000574867 DSCAML1Q8TD84 2053 aa14.11□□□□□ -0.15
NUP88-210ENST00000574867 ABCA1O95477 2261 aa14.11□□□□□ -0.15
NUP88-210ENST00000574867 ODAMA1E959 279 aa14.1□□□□□ -0.15
NUP88-210ENST00000574867 J3QLI3 93 aa14.1□□□□□ -0.15
NUP88-210ENST00000574867 APOA1P02647 267 aa14.1□□□□□ -0.15
NUP88-210ENST00000574867 ZNF497Q6ZNH5 498 aa14.1□□□□□ -0.15
NUP88-210ENST00000574867 KIR3DL3Q8N743 410 aa14.1□□□□□ -0.15
NUP88-210ENST00000574867 TPRX1Q8N7U7 411 aa14.1□□□□□ -0.15
NUP88-210ENST00000574867 S100A16Q96FQ6 103 aaKnown RBP14.1□□□□□ -0.15
NUP88-210ENST00000574867 PECRQ9BY49 303 aa14.1□□□□□ -0.15
NUP88-210ENST00000574867 DIABLOQ9NR28 239 aa14.1□□□□□ -0.15
NUP88-210ENST00000574867 OR6C3Q9NZP0 311 aa14.1□□□□□ -0.15
NUP88-210ENST00000574867 KCNS2Q9ULS6 477 aa14.1□□□□□ -0.15
NUP88-210ENST00000574867 A0A075B6Q4 140 aa14.1□□□□□ -0.15
NUP88-210ENST00000574867 UBE2QL1A1L167 161 aa14.1□□□□□ -0.15
NUP88-210ENST00000574867 HIST1H1DP16402 221 aaKnown RBP14.1□□□□□ -0.15
NUP88-210ENST00000574867 GLIPR1P48060 266 aa14.1□□□□□ -0.15
NUP88-210ENST00000574867 PLAC9Q5JTB6 97 aa14.1□□□□□ -0.15
NUP88-210ENST00000574867 CMTM4Q8IZR5 234 aa14.1□□□□□ -0.15
NUP88-210ENST00000574867 GAPTQ8N292 157 aa14.1□□□□□ -0.15
NUP88-210ENST00000574867 KIF25Q9UIL4 384 aa14.1□□□□□ -0.15
NUP88-210ENST00000574867 MEIKINA0A087WXM9 373 aa14.09□□□□□ -0.15
NUP88-210ENST00000574867 TRGV10A0A0A0MS01 117 aa14.09□□□□□ -0.15
NUP88-210ENST00000574867 SERPINE3A8MV23 424 aa14.09□□□□□ -0.15
NUP88-210ENST00000574867 MFNGO00587 321 aa14.09□□□□□ -0.15
NUP88-210ENST00000574867 FAAP24Q9BTP7 215 aa14.09□□□□□ -0.15
NUP88-210ENST00000574867 EXOSC5Q9NQT4 235 aaKnown RBP eCLIP14.09□□□□□ -0.15
NUP88-210ENST00000574867 ING3Q9NXR8 418 aa14.09□□□□□ -0.15
NUP88-210ENST00000574867 UBE2J1Q9Y385 318 aaPredicted RBP14.09□□□□□ -0.15
NUP88-210ENST00000574867 HIVEP1P15822 2718 aa14.09□□□□□ -0.15
NUP88-210ENST00000574867 ZANQ9Y493 2812 aa14.09□□□□□ -0.15
NUP88-210ENST00000574867 TMEM200BQ69YZ2 307 aa14.08□□□□□ -0.15
NUP88-210ENST00000574867 MCFD2Q8NI22 146 aa14.08□□□□□ -0.15
NUP88-210ENST00000574867 NXF2Q9GZY0 626 aaKnown RBP14.08□□□□□ -0.15
NUP88-210ENST00000574867 RIMS4Q9H426 269 aaPredicted RBP14.08□□□□□ -0.15
Retrieved 100 of 20,778 RNA–protein pairs in 72.7 ms