RNA–Protein interactions for RNA: ENST00000573550.5

CDC27-215, Transcript of cell division cycle 27, humanhuman

TSL 3

Gene CDC27, Length 583 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC27-215ENST00000573550 PRSS54Q6PEW0 395 aa4.03□□□□□ -1.76
CDC27-215ENST00000573550 Q7L0L9 218 aa4.03□□□□□ -1.76
CDC27-215ENST00000573550 DCXRQ7Z4W1 244 aa4.03□□□□□ -1.76
CDC27-215ENST00000573550 RABEPKQ7Z6M1 372 aa4.03□□□□□ -1.76
CDC27-215ENST00000573550 TMED4Q7Z7H5 227 aa4.03□□□□□ -1.76
CDC27-215ENST00000573550 TRAPPC6BQ86SZ2 158 aa4.03□□□□□ -1.76
CDC27-215ENST00000573550 MARCH3Q86UD3 253 aa4.03□□□□□ -1.76
CDC27-215ENST00000573550 LHFPL1Q86WI0 220 aa4.03□□□□□ -1.76
CDC27-215ENST00000573550 IQCF2Q8IXL9 164 aa4.03□□□□□ -1.76
CDC27-215ENST00000573550 SPAG16Q8N0X2 631 aa4.03□□□□□ -1.76
CDC27-215ENST00000573550 KDM8Q8N371 416 aa4.03□□□□□ -1.76
CDC27-215ENST00000573550 FAM89BQ8N5H3 189 aa4.03□□□□□ -1.76
CDC27-215ENST00000573550 JAGN1Q8N5M9 183 aa4.03□□□□□ -1.76
CDC27-215ENST00000573550 OR4K17Q8NGC6 315 aa4.03□□□□□ -1.76
CDC27-215ENST00000573550 OR56B1Q8NGI3 324 aa4.03□□□□□ -1.76
CDC27-215ENST00000573550 OR4D6Q8NGJ1 314 aa4.03□□□□□ -1.76
CDC27-215ENST00000573550 OR10R2Q8NGX6 335 aa4.03□□□□□ -1.76
CDC27-215ENST00000573550 OR6X1Q8NH79 312 aa4.03□□□□□ -1.76
CDC27-215ENST00000573550 TERB2Q8NHR7 220 aa4.03□□□□□ -1.76
CDC27-215ENST00000573550 TSLPQ969D9 159 aa4.03□□□□□ -1.76
CDC27-215ENST00000573550 ARL11Q969Q4 196 aa4.03□□□□□ -1.76
CDC27-215ENST00000573550 MARC2Q969Z3 335 aa4.03□□□□□ -1.76
CDC27-215ENST00000573550 MRGPRFQ96AM1 343 aa4.03□□□□□ -1.76
CDC27-215ENST00000573550 SLAMF6Q96DU3 332 aa4.03□□□□□ -1.76
CDC27-215ENST00000573550 PIK3IP1Q96FE7 263 aa4.03□□□□□ -1.76
CDC27-215ENST00000573550 CPNE2Q96FN4 548 aaPredicted RBP4.03□□□□□ -1.76
CDC27-215ENST00000573550 TGM7Q96PF1 710 aa4.03□□□□□ -1.76
CDC27-215ENST00000573550 AQP10Q96PS8 301 aa4.03□□□□□ -1.76
CDC27-215ENST00000573550 URM1Q9BTM9 101 aaKnown RBP4.03□□□□□ -1.76
CDC27-215ENST00000573550 PDCD10Q9BUL8 212 aa4.03□□□□□ -1.76
CDC27-215ENST00000573550 GPR174Q9BXC1 333 aa4.03□□□□□ -1.76
CDC27-215ENST00000573550 MRPL13Q9BYD1 178 aaKnown RBP4.03□□□□□ -1.76
CDC27-215ENST00000573550 ULBP3Q9BZM4 244 aa4.03□□□□□ -1.76
CDC27-215ENST00000573550 CST11Q9H112 138 aa4.03□□□□□ -1.76
CDC27-215ENST00000573550 Q9N2K0 584 aa4.03□□□□□ -1.76
CDC27-215ENST00000573550 C12orf4Q9NQ89 552 aa4.03□□□□□ -1.76
CDC27-215ENST00000573550 IFT46Q9NQC8 304 aa4.03□□□□□ -1.76
CDC27-215ENST00000573550 MMP26Q9NRE1 261 aa4.03□□□□□ -1.76
CDC27-215ENST00000573550 SDHAF3Q9NRP4 125 aa4.03□□□□□ -1.76
CDC27-215ENST00000573550 SERINC1Q9NRX5 453 aa4.03□□□□□ -1.76
CDC27-215ENST00000573550 VSIG4Q9Y279 399 aa4.03□□□□□ -1.76
CDC27-215ENST00000573550 MEMO1Q9Y316 297 aa4.03□□□□□ -1.76
CDC27-215ENST00000573550 PRELID3BQ9Y3B1 194 aa4.03□□□□□ -1.76
CDC27-215ENST00000573550 A0A087WZY1 265 aa4.02□□□□□ -1.77
CDC27-215ENST00000573550 A0A0U1RQV5 110 aa4.02□□□□□ -1.77
CDC27-215ENST00000573550 EPOPA6NHQ4 379 aa4.02□□□□□ -1.77
CDC27-215ENST00000573550 OR2AT4A6NND4 320 aa4.02□□□□□ -1.77
CDC27-215ENST00000573550 FOXI3A8MTJ6 420 aaPredicted RBP4.02□□□□□ -1.77
CDC27-215ENST00000573550 C11orf98E9PRG8 122 aa4.02□□□□□ -1.77
CDC27-215ENST00000573550 RRP8O43159 456 aaKnown RBP4.02□□□□□ -1.77
CDC27-215ENST00000573550 ADAM20O43506 726 aa4.02□□□□□ -1.77
CDC27-215ENST00000573550 SYT7O43581 403 aa4.02□□□□□ -1.77
CDC27-215ENST00000573550 SSX5O60225 188 aa4.02□□□□□ -1.77
CDC27-215ENST00000573550 ALOX12BO75342 701 aa4.02□□□□□ -1.77
CDC27-215ENST00000573550 SCO1O75880 301 aa4.02□□□□□ -1.77
CDC27-215ENST00000573550 SIX6O95475 246 aa4.02□□□□□ -1.77
CDC27-215ENST00000573550 IGHG1P01857 330 aa4.02□□□□□ -1.77
CDC27-215ENST00000573550 IFNA6P05013 189 aa4.02□□□□□ -1.77
CDC27-215ENST00000573550 DCNP07585 359 aaKnown RBP4.02□□□□□ -1.77
CDC27-215ENST00000573550 DANCRP0C864 163 aa4.02□□□□□ -1.77
CDC27-215ENST00000573550 PGA4P0DJD7 388 aa4.02□□□□□ -1.77
CDC27-215ENST00000573550 PGA3P0DJD8 388 aa4.02□□□□□ -1.77
CDC27-215ENST00000573550 IGHV4-31P0DP07 118 aa4.02□□□□□ -1.77
CDC27-215ENST00000573550 LAP3P28838 519 aa4.02□□□□□ -1.77
CDC27-215ENST00000573550 HRH1P35367 487 aa4.02□□□□□ -1.77
CDC27-215ENST00000573550 ZNF93P35789 620 aaPredicted RBP4.02□□□□□ -1.77
CDC27-215ENST00000573550 ZNF41P51814 821 aaPredicted RBP4.02□□□□□ -1.77
CDC27-215ENST00000573550 KRTAP10-5P60370 271 aa4.02□□□□□ -1.77
CDC27-215ENST00000573550 LSM6P62312 80 aaKnown RBP4.02□□□□□ -1.77
CDC27-215ENST00000573550 DCDP81605 110 aaKnown RBP4.02□□□□□ -1.77
CDC27-215ENST00000573550 ECH1Q13011 328 aa4.02□□□□□ -1.77
CDC27-215ENST00000573550 BTN1A1Q13410 526 aa4.02□□□□□ -1.77
CDC27-215ENST00000573550 HMGN3Q15651 99 aa4.02□□□□□ -1.77
CDC27-215ENST00000573550 HIST3H3Q16695 136 aa4.02□□□□□ -1.77
CDC27-215ENST00000573550 PLPPR5Q32ZL2 321 aa4.02□□□□□ -1.77
CDC27-215ENST00000573550 MS4A18Q3C1V0 323 aa4.02□□□□□ -1.77
CDC27-215ENST00000573550 CDNFQ49AH0 187 aa4.02□□□□□ -1.77
CDC27-215ENST00000573550 KRTAP5-6Q6L8G9 129 aaPredicted RBP4.02□□□□□ -1.77
CDC27-215ENST00000573550 SLC16A14Q7RTX9 510 aa4.02□□□□□ -1.77
CDC27-215ENST00000573550 HIST2H2ABQ8IUE6 130 aaPredicted RBP4.02□□□□□ -1.77
CDC27-215ENST00000573550 SKA3Q8IX90 412 aa4.02□□□□□ -1.77
CDC27-215ENST00000573550 BAP18Q8IXM2 172 aa4.02□□□□□ -1.77
CDC27-215ENST00000573550 COMMD1Q8N668 190 aa4.02□□□□□ -1.77
CDC27-215ENST00000573550 ZNF321PQ8N8H1 164 aa4.02□□□□□ -1.77
CDC27-215ENST00000573550 TMEM178AQ8NBL3 297 aa4.02□□□□□ -1.77
CDC27-215ENST00000573550 APCDD1LQ8NCL9 501 aa4.02□□□□□ -1.77
CDC27-215ENST00000573550 NFAM1Q8NET5 270 aaPredicted RBP4.02□□□□□ -1.77
CDC27-215ENST00000573550 TSTD1Q8NFU3 115 aa4.02□□□□□ -1.77
CDC27-215ENST00000573550 OR5AP2Q8NGF4 316 aa4.02□□□□□ -1.77
CDC27-215ENST00000573550 OR51A2Q8NGJ7 313 aa4.02□□□□□ -1.77
CDC27-215ENST00000573550 OR5L2Q8NGL0 311 aa4.02□□□□□ -1.77
CDC27-215ENST00000573550 OR1L3Q8NH93 324 aa4.02□□□□□ -1.77
CDC27-215ENST00000573550 MRGPRDQ8TDS7 321 aa4.02□□□□□ -1.77
CDC27-215ENST00000573550 LMX1AQ8TE12 382 aa4.02□□□□□ -1.77
CDC27-215ENST00000573550 PHLDA1Q8WV24 401 aaPredicted RBP4.02□□□□□ -1.77
CDC27-215ENST00000573550 PP6455Q8WZ26 134 aa4.02□□□□□ -1.77
CDC27-215ENST00000573550 RAB3CQ96E17 227 aa4.02□□□□□ -1.77
CDC27-215ENST00000573550 SPACA9Q96E40 222 aaPredicted RBP4.02□□□□□ -1.77
CDC27-215ENST00000573550 SMIM8Q96KF7 97 aa4.02□□□□□ -1.77
CDC27-215ENST00000573550 C1orf147Q96MC9 270 aaPredicted RBP4.02□□□□□ -1.77
Retrieved 100 of 20,778 RNA–protein pairs in 52.4 ms