RNA–Protein interactions for RNA: ENST00000571043.5

RPAIN-208, Transcript of RPA interacting protein, humanhuman

TSL 2

Gene RPAIN, Length 1,547 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPAIN-208ENST00000571043 RFPL4AL1F8VTS6 287 aa14.69□□□□□ -0.06
RPAIN-208ENST00000571043 PGA5P0DJD9 388 aa14.69□□□□□ -0.06
RPAIN-208ENST00000571043 NFYAP23511 347 aaPredicted RBP14.69□□□□□ -0.06
RPAIN-208ENST00000571043 GLP1RP43220 463 aa14.69□□□□□ -0.06
RPAIN-208ENST00000571043 ZNF81P51508 661 aa14.69□□□□□ -0.06
RPAIN-208ENST00000571043 SEC61A1P61619 476 aaKnown RBP14.69□□□□□ -0.06
RPAIN-208ENST00000571043 TFF3Q07654 80 aa14.69□□□□□ -0.06
RPAIN-208ENST00000571043 ZNF154Q13106 437 aa14.69□□□□□ -0.06
RPAIN-208ENST00000571043 BAMBIQ13145 260 aa14.69□□□□□ -0.06
RPAIN-208ENST00000571043 CLEC18BQ6UXF7 455 aa14.69□□□□□ -0.06
RPAIN-208ENST00000571043 Q6ZPA2 131 aa14.69□□□□□ -0.06
RPAIN-208ENST00000571043 SUMF2Q8NBJ7 301 aa14.69□□□□□ -0.06
RPAIN-208ENST00000571043 COQ8AQ8NI60 647 aa14.69□□□□□ -0.06
RPAIN-208ENST00000571043 LRRC46Q96FV0 321 aa14.69□□□□□ -0.06
RPAIN-208ENST00000571043 NRIP2Q9BQI9 281 aa14.69□□□□□ -0.06
RPAIN-208ENST00000571043 CXXC4Q9H2H0 198 aa14.69□□□□□ -0.06
RPAIN-208ENST00000571043 Q9N2K0 584 aa14.69□□□□□ -0.06
RPAIN-208ENST00000571043 CADP27708 2225 aa14.69□□□□□ -0.06
RPAIN-208ENST00000571043 LRRK2Q5S007 2527 aa14.68□□□□□ -0.06
RPAIN-208ENST00000571043 J3QKU1 62 aa14.68□□□□□ -0.06
RPAIN-208ENST00000571043 TIMM8AO60220 97 aaPredicted RBP14.68□□□□□ -0.06
RPAIN-208ENST00000571043 NOS1APO75052 506 aaPredicted RBP14.68□□□□□ -0.06
RPAIN-208ENST00000571043 RPS2P15880 293 aaKnown RBP14.68□□□□□ -0.06
RPAIN-208ENST00000571043 UCP3P55916 312 aa14.68□□□□□ -0.06
RPAIN-208ENST00000571043 SUPT4H1P63272 117 aaKnown RBP14.68□□□□□ -0.06
RPAIN-208ENST00000571043 SRSF1Q07955 248 aaKnown RBP eCLIP14.68□□□□□ -0.06
RPAIN-208ENST00000571043 PDCD10Q9BUL8 212 aa14.68□□□□□ -0.06
RPAIN-208ENST00000571043 WDR13Q9H1Z4 485 aa14.68□□□□□ -0.06
RPAIN-208ENST00000571043 SLC23A1Q9UHI7 598 aa14.68□□□□□ -0.06
RPAIN-208ENST00000571043 SPEF1Q9Y4P9 236 aa14.68□□□□□ -0.06
RPAIN-208ENST00000571043 ANKHD1Q8IWZ3 2542 aaKnown RBP14.68□□□□□ -0.06
RPAIN-208ENST00000571043 TRAV24A0A0B4J272 114 aa14.67□□□□□ -0.06
RPAIN-208ENST00000571043 KIR2DS1A0A191URI9 304 aa14.67□□□□□ -0.06
RPAIN-208ENST00000571043 DEGS1O15121 323 aa14.67□□□□□ -0.06
RPAIN-208ENST00000571043 MLNRO43193 412 aa14.67□□□□□ -0.06
RPAIN-208ENST00000571043 PI3P19957 117 aa14.67□□□□□ -0.06
RPAIN-208ENST00000571043 DUSP1P28562 367 aa14.67□□□□□ -0.06
RPAIN-208ENST00000571043 CCKARP32238 428 aa14.67□□□□□ -0.06
RPAIN-208ENST00000571043 KIR2DS4P43632 304 aa14.67□□□□□ -0.06
RPAIN-208ENST00000571043 ZNF83P51522 516 aa14.67□□□□□ -0.06
RPAIN-208ENST00000571043 MZT1Q08AG7 82 aa14.67□□□□□ -0.06
RPAIN-208ENST00000571043 KIR2DS1Q14954 304 aa14.67□□□□□ -0.06
RPAIN-208ENST00000571043 Q6P435 159 aa14.67□□□□□ -0.06
RPAIN-208ENST00000571043 KCTD9Q7L273 389 aa14.67□□□□□ -0.06
RPAIN-208ENST00000571043 PIK3IP1Q96FE7 263 aa14.67□□□□□ -0.06
RPAIN-208ENST00000571043 DPCDQ9BVM2 203 aaPredicted RBP14.67□□□□□ -0.06
RPAIN-208ENST00000571043 TLNRD1Q9H1K6 362 aa14.67□□□□□ -0.06
RPAIN-208ENST00000571043 LIME1Q9H400 295 aa14.67□□□□□ -0.06
RPAIN-208ENST00000571043 HEXA-AS1Q9H8Q6 139 aa14.67□□□□□ -0.06
RPAIN-208ENST00000571043 RAB18Q9NP72 206 aa14.67□□□□□ -0.06
RPAIN-208ENST00000571043 H0YL77 283 aa14.66□□□□□ -0.06
RPAIN-208ENST00000571043 L7N2F9 121 aa14.66□□□□□ -0.06
RPAIN-208ENST00000571043 CDIPTO14735 213 aa14.66□□□□□ -0.06
RPAIN-208ENST00000571043 TSC22D2O75157 780 aa14.66□□□□□ -0.06
RPAIN-208ENST00000571043 CTXN2P0C2S0 81 aa14.66□□□□□ -0.06
RPAIN-208ENST00000571043 ZNF728P0DKX0 622 aa14.66□□□□□ -0.06
RPAIN-208ENST00000571043 CXCL2P19875 107 aa14.66□□□□□ -0.06
RPAIN-208ENST00000571043 FCGR2CP31995 323 aa14.66□□□□□ -0.06
RPAIN-208ENST00000571043 MDH2P40926 338 aaKnown RBP14.66□□□□□ -0.06
RPAIN-208ENST00000571043 FABP6P51161 128 aa14.66□□□□□ -0.06
RPAIN-208ENST00000571043 ZNF146Q15072 292 aa14.66□□□□□ -0.06
RPAIN-208ENST00000571043 SHEQ5VZ18 495 aa14.66□□□□□ -0.06
RPAIN-208ENST00000571043 RGS7BPQ6MZT1 257 aaPredicted RBP14.66□□□□□ -0.06
RPAIN-208ENST00000571043 C22orf34Q6ZV56 151 aa14.66□□□□□ -0.06
RPAIN-208ENST00000571043 POC1AQ8NBT0 407 aa14.66□□□□□ -0.06
RPAIN-208ENST00000571043 NEK7Q8TDX7 302 aa14.66□□□□□ -0.06
RPAIN-208ENST00000571043 MOB3AQ96BX8 217 aa14.66□□□□□ -0.06
RPAIN-208ENST00000571043 ELMOD3Q96FG2 381 aa14.66□□□□□ -0.06
RPAIN-208ENST00000571043 FXYD6Q9H0Q3 95 aa14.66□□□□□ -0.06
RPAIN-208ENST00000571043 TREM2Q9NZC2 230 aa14.66□□□□□ -0.06
RPAIN-208ENST00000571043 COL12A1Q99715 3063 aa14.66□□□□□ -0.06
RPAIN-208ENST00000571043 TRAV14DV4A0A0A6YYC5 116 aa14.66□□□□□ -0.06
RPAIN-208ENST00000571043 CLEC18AA5D8T8 446 aa14.66□□□□□ -0.06
RPAIN-208ENST00000571043 TRDCB7Z8K6 153 aa14.66□□□□□ -0.06
RPAIN-208ENST00000571043 M0R1B8 84 aa14.66□□□□□ -0.06
RPAIN-208ENST00000571043 CCSO14618 274 aa14.66□□□□□ -0.06
RPAIN-208ENST00000571043 CRYAAP02489 173 aa14.66□□□□□ -0.06
RPAIN-208ENST00000571043 GRPP07492 148 aa14.66□□□□□ -0.06
RPAIN-208ENST00000571043 SLC25A4P12235 298 aa14.66□□□□□ -0.06
RPAIN-208ENST00000571043 CYCSP99999 105 aaKnown RBP14.66□□□□□ -0.06
RPAIN-208ENST00000571043 SORDQ00796 357 aa14.66□□□□□ -0.06
RPAIN-208ENST00000571043 SLC9A3R2Q15599 337 aa14.66□□□□□ -0.06
RPAIN-208ENST00000571043 SPIN3Q5JUX0 258 aa14.66□□□□□ -0.06
RPAIN-208ENST00000571043 ZNF880Q6PDB4 577 aa14.66□□□□□ -0.06
RPAIN-208ENST00000571043 TMEM65Q6PI78 240 aa14.66□□□□□ -0.06
RPAIN-208ENST00000571043 GSG1LQ6UXU4 331 aa14.66□□□□□ -0.06
RPAIN-208ENST00000571043 SGPP2Q8IWX5 399 aa14.66□□□□□ -0.06
RPAIN-208ENST00000571043 CLEC18CQ8NCF0 446 aa14.66□□□□□ -0.06
RPAIN-208ENST00000571043 HES4Q9HCC6 221 aa14.66□□□□□ -0.06
RPAIN-208ENST00000571043 COMMD9Q9P000 198 aa14.66□□□□□ -0.06
RPAIN-208ENST00000571043 ATP23Q9Y6H3 246 aa14.66□□□□□ -0.06
RPAIN-208ENST00000571043 FXYD6-FXYD2A0A087WZ82 144 aa14.65□□□□□ -0.06
RPAIN-208ENST00000571043 CRYM-AS1A6NIL9 109 aa14.65□□□□□ -0.06
RPAIN-208ENST00000571043 H7C1Q1 480 aa14.65□□□□□ -0.06
RPAIN-208ENST00000571043 M0R233 179 aa14.65□□□□□ -0.06
RPAIN-208ENST00000571043 NXPH2O95156 264 aa14.65□□□□□ -0.06
RPAIN-208ENST00000571043 KNG1P01042 644 aa14.65□□□□□ -0.06
RPAIN-208ENST00000571043 IFNA2P01563 188 aa14.65□□□□□ -0.06
RPAIN-208ENST00000571043 ZNF44P15621 663 aa14.65□□□□□ -0.06
RPAIN-208ENST00000571043 GRNP28799 593 aaKnown RBP14.65□□□□□ -0.06
Retrieved 100 of 20,778 RNA–protein pairs in 95.7 ms