RNA–Protein interactions for RNA: ENST00000569252.5

USB1-215, Transcript of U6 snRNA biogenesis phosphodiesterase 1, humanhuman

TSL 4

Gene USB1, Length 573 nt, Biotype processed transcript, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USB1-215ENST00000569252 SEC61A1P61619 476 aaKnown RBP13.29□□□□□ -0.28
USB1-215ENST00000569252 RPL31P62899 125 aaKnown RBP13.29□□□□□ -0.28
USB1-215ENST00000569252 KRBOX4Q5JUW0 171 aa13.29□□□□□ -0.28
USB1-215ENST00000569252 UBE2NLQ5JXB2 153 aa13.29□□□□□ -0.28
USB1-215ENST00000569252 C17orf107Q6ZR85 190 aa13.29□□□□□ -0.28
USB1-215ENST00000569252 GLCCI1Q86VQ1 547 aa13.29□□□□□ -0.28
USB1-215ENST00000569252 FAM89BQ8N5H3 189 aa13.29□□□□□ -0.28
USB1-215ENST00000569252 SAMD12Q8N8I0 201 aa13.29□□□□□ -0.28
USB1-215ENST00000569252 DYNC2LI1Q8TCX1 351 aa13.29□□□□□ -0.28
USB1-215ENST00000569252 RAB40AQ8WXH6 277 aa13.29□□□□□ -0.28
USB1-215ENST00000569252 CMTM3Q96MX0 182 aa13.29□□□□□ -0.28
USB1-215ENST00000569252 SHARPINQ9H0F6 387 aa13.29□□□□□ -0.28
USB1-215ENST00000569252 RHBDL2Q9NX52 303 aa13.29□□□□□ -0.28
USB1-215ENST00000569252 ING3Q9NXR8 418 aa13.29□□□□□ -0.28
USB1-215ENST00000569252 ADAM30Q9UKF2 790 aa13.29□□□□□ -0.28
USB1-215ENST00000569252 A0A096LNT2 108 aa13.28□□□□□ -0.28
USB1-215ENST00000569252 TRAV24A0A0B4J272 114 aa13.28□□□□□ -0.28
USB1-215ENST00000569252 A0A1B0GW55 424 aa13.28□□□□□ -0.28
USB1-215ENST00000569252 hCG_1809904A0A1W2PP81 198 aa13.28□□□□□ -0.28
USB1-215ENST00000569252 A0A1W2PPE2 198 aa13.28□□□□□ -0.28
USB1-215ENST00000569252 A0A1W2PR64 198 aa13.28□□□□□ -0.28
USB1-215ENST00000569252 A0A1W2PRV1 198 aa13.28□□□□□ -0.28
USB1-215ENST00000569252 hADV38S2A0JD32 116 aa13.28□□□□□ -0.28
USB1-215ENST00000569252 FAM25AB3EWG3 89 aa13.28□□□□□ -0.28
USB1-215ENST00000569252 FAM25CB3EWG5 89 aa13.28□□□□□ -0.28
USB1-215ENST00000569252 FAM25GB3EWG6 89 aa13.28□□□□□ -0.28
USB1-215ENST00000569252 ENSAO43768 121 aaKnown RBP13.28□□□□□ -0.28
USB1-215ENST00000569252 PSPNO60542 156 aa13.28□□□□□ -0.28
USB1-215ENST00000569252 ZNF737O75373 536 aa13.28□□□□□ -0.28
USB1-215ENST00000569252 DUX4L2P0CJ85 424 aa13.28□□□□□ -0.28
USB1-215ENST00000569252 DUX4L3P0CJ86 424 aa13.28□□□□□ -0.28
USB1-215ENST00000569252 DUX4L4P0CJ87 422 aa13.28□□□□□ -0.28
USB1-215ENST00000569252 DUX4L5P0CJ88 424 aa13.28□□□□□ -0.28
USB1-215ENST00000569252 DUX4L6P0CJ89 424 aa13.28□□□□□ -0.28
USB1-215ENST00000569252 DUX4L7P0CJ90 424 aa13.28□□□□□ -0.28
USB1-215ENST00000569252 IGHV4-31P0DP07 118 aa13.28□□□□□ -0.28
USB1-215ENST00000569252 SELLP14151 372 aa13.28□□□□□ -0.28
USB1-215ENST00000569252 OR3A1P47881 315 aa13.28□□□□□ -0.28
USB1-215ENST00000569252 BRICD5Q6PL45 260 aa13.28□□□□□ -0.28
USB1-215ENST00000569252 DUX4L9Q6RFH8 374 aaPredicted RBP13.28□□□□□ -0.28
USB1-215ENST00000569252 METAP1DQ6UB28 335 aaPredicted RBP13.28□□□□□ -0.28
USB1-215ENST00000569252 ZNF565Q8N9K5 539 aa13.28□□□□□ -0.28
USB1-215ENST00000569252 OR4S1Q8NGB4 309 aa13.28□□□□□ -0.28
USB1-215ENST00000569252 OR4M1Q8NGD0 313 aa13.28□□□□□ -0.28
USB1-215ENST00000569252 OR5H6Q8NGV6 325 aa13.28□□□□□ -0.28
USB1-215ENST00000569252 OR10R2Q8NGX6 335 aa13.28□□□□□ -0.28
USB1-215ENST00000569252 RAB3CQ96E17 227 aa13.28□□□□□ -0.28
USB1-215ENST00000569252 C1orf159Q96HA4 380 aa13.28□□□□□ -0.28
USB1-215ENST00000569252 NICN1Q9BSH3 213 aa13.28□□□□□ -0.28
USB1-215ENST00000569252 DCUN1D5Q9BTE7 237 aa13.28□□□□□ -0.28
USB1-215ENST00000569252 ETAA1Q9NY74 926 aa13.28□□□□□ -0.28
USB1-215ENST00000569252 DUX4Q9UBX2 424 aa13.28□□□□□ -0.28
USB1-215ENST00000569252 A0A0A6YYH2 397 aa13.27□□□□□ -0.29
USB1-215ENST00000569252 PPIAL4CA0A0B4J2A2 164 aa13.27□□□□□ -0.29
USB1-215ENST00000569252 A0A0G2JMP0 313 aa13.27□□□□□ -0.29
USB1-215ENST00000569252 A0A0X1KG70 313 aa13.27□□□□□ -0.29
USB1-215ENST00000569252 UBE2QL1A1L167 161 aa13.27□□□□□ -0.29
USB1-215ENST00000569252 A6NJ64 397 aa13.27□□□□□ -0.29
USB1-215ENST00000569252 A8MXK9 166 aa13.27□□□□□ -0.29
USB1-215ENST00000569252 SOCS1O15524 211 aa13.27□□□□□ -0.29
USB1-215ENST00000569252 CA11O75493 328 aa13.27□□□□□ -0.29
USB1-215ENST00000569252 CSN2P05814 226 aa13.27□□□□□ -0.29
USB1-215ENST00000569252 PPIAL4GP0DN37 164 aa13.27□□□□□ -0.29
USB1-215ENST00000569252 GATA3P23771 443 aa13.27□□□□□ -0.29
USB1-215ENST00000569252 ZFP36P26651 326 aaKnown RBP13.27□□□□□ -0.29
USB1-215ENST00000569252 ERP29P30040 261 aaKnown RBP13.27□□□□□ -0.29
USB1-215ENST00000569252 TALDO1P37837 337 aa13.27□□□□□ -0.29
USB1-215ENST00000569252 EFNB2P52799 333 aa13.27□□□□□ -0.29
USB1-215ENST00000569252 MEF2CQ06413 473 aaPredicted RBP13.27□□□□□ -0.29
USB1-215ENST00000569252 AESQ08117 197 aa13.27□□□□□ -0.29
USB1-215ENST00000569252 ATXN7L3Q14CW9 347 aaPredicted RBP13.27□□□□□ -0.29
USB1-215ENST00000569252 DCAF12L2Q5VW00 463 aa13.27□□□□□ -0.29
USB1-215ENST00000569252 TRAPPC6BQ86SZ2 158 aa13.27□□□□□ -0.29
USB1-215ENST00000569252 CMTM4Q8IZR5 234 aa13.27□□□□□ -0.29
USB1-215ENST00000569252 FAM185AQ8N0U4 392 aa13.27□□□□□ -0.29
USB1-215ENST00000569252 OR4M2Q8NGB6 313 aa13.27□□□□□ -0.29
USB1-215ENST00000569252 MCFD2Q8NI22 146 aa13.27□□□□□ -0.29
USB1-215ENST00000569252 TMEM186Q96B77 213 aa13.27□□□□□ -0.29
USB1-215ENST00000569252 MSI2Q96DH6 328 aaKnown RBP13.27□□□□□ -0.29
USB1-215ENST00000569252 NUDT16L1Q9BRJ7 211 aaKnown RBP13.27□□□□□ -0.29
USB1-215ENST00000569252 DCTN5Q9BTE1 182 aa13.27□□□□□ -0.29
USB1-215ENST00000569252 C6orf62Q9GZU0 229 aaPredicted RBP13.27□□□□□ -0.29
USB1-215ENST00000569252 CHMP1AQ9HD42 196 aaPredicted RBP13.27□□□□□ -0.29
USB1-215ENST00000569252 HIF1ANQ9NWT6 349 aa13.27□□□□□ -0.29
USB1-215ENST00000569252 RPUSD1Q9UJJ7 312 aaKnown RBP13.27□□□□□ -0.29
USB1-215ENST00000569252 HSF4Q9ULV5 492 aa13.27□□□□□ -0.29
USB1-215ENST00000569252 A0A075B6Q4 140 aa13.26□□□□□ -0.29
USB1-215ENST00000569252 MEIKINA0A087WXM9 373 aa13.26□□□□□ -0.29
USB1-215ENST00000569252 TRGV10A0A0A0MS01 117 aa13.26□□□□□ -0.29
USB1-215ENST00000569252 TMEM30CPA0ZSE6 113 aa13.26□□□□□ -0.29
USB1-215ENST00000569252 APOA1P02647 267 aa13.26□□□□□ -0.29
USB1-215ENST00000569252 MNDAP41218 407 aa13.26□□□□□ -0.29
USB1-215ENST00000569252 DVL1P1P54792 670 aaPredicted RBP13.26□□□□□ -0.29
USB1-215ENST00000569252 SLC35E4Q6ICL7 350 aa13.26□□□□□ -0.29
USB1-215ENST00000569252 FAHD2BQ6P2I3 314 aaPredicted RBP13.26□□□□□ -0.29
USB1-215ENST00000569252 C6orf201Q7Z4U5 140 aa13.26□□□□□ -0.29
USB1-215ENST00000569252 FAHD2AQ96GK7 314 aa13.26□□□□□ -0.29
USB1-215ENST00000569252 ARHGAP5-AS1Q96IT6 56 aa13.26□□□□□ -0.29
USB1-215ENST00000569252 DMRTB1Q96MA1 342 aa13.26□□□□□ -0.29
USB1-215ENST00000569252 FAAP24Q9BTP7 215 aa13.26□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 31 ms