RNA–Protein interactions for RNA: ENST00000568676.5

HERPUD1-215, Transcript of homocysteine inducible ER protein with ubiquitin like domain 1, humanhuman

TSL 2

Gene HERPUD1, Length 571 nt, Biotype retained intron, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERPUD1-215ENST00000568676 PNLIPRP3Q17RR3 467 aa12.41□□□□□ -0.42
HERPUD1-215ENST00000568676 C18orf65Q6ZTR6 163 aa12.41□□□□□ -0.42
HERPUD1-215ENST00000568676 KCTD20Q7Z5Y7 419 aa12.41□□□□□ -0.42
HERPUD1-215ENST00000568676 SPATA24Q86W54 205 aa12.41□□□□□ -0.42
HERPUD1-215ENST00000568676 DRAM1Q8N682 238 aa12.41□□□□□ -0.42
HERPUD1-215ENST00000568676 OR10A7Q8NGE5 316 aa12.41□□□□□ -0.42
HERPUD1-215ENST00000568676 RAX2Q96IS3 184 aa12.41□□□□□ -0.42
HERPUD1-215ENST00000568676 IL4I1Q96RQ9 567 aa12.41□□□□□ -0.42
HERPUD1-215ENST00000568676 MBOAT4Q96T53 435 aa12.41□□□□□ -0.42
HERPUD1-215ENST00000568676 IGKV1-12A0A0C4DH73 117 aa12.4□□□□□ -0.42
HERPUD1-215ENST00000568676 TCRBV3S1A0A5B6 114 aa12.4□□□□□ -0.42
HERPUD1-215ENST00000568676 DEGS1O15121 323 aa12.4□□□□□ -0.42
HERPUD1-215ENST00000568676 IGKV1D-12P01611 117 aa12.4□□□□□ -0.42
HERPUD1-215ENST00000568676 CGB3P0DN86 165 aa12.4□□□□□ -0.42
HERPUD1-215ENST00000568676 CGB7P0DN87 165 aa12.4□□□□□ -0.42
HERPUD1-215ENST00000568676 T-ENOLP0DO92 83 aa12.4□□□□□ -0.42
HERPUD1-215ENST00000568676 CALCBP10092 127 aa12.4□□□□□ -0.42
HERPUD1-215ENST00000568676 CHATP28329 748 aa12.4□□□□□ -0.42
HERPUD1-215ENST00000568676 CDX1P47902 265 aaPredicted RBP12.4□□□□□ -0.42
HERPUD1-215ENST00000568676 PAX5Q02548 391 aa12.4□□□□□ -0.42
HERPUD1-215ENST00000568676 SCN1BQ07699 218 aa12.4□□□□□ -0.42
HERPUD1-215ENST00000568676 EBI3Q14213 229 aa12.4□□□□□ -0.42
HERPUD1-215ENST00000568676 CXorf66Q5JRM2 361 aaPredicted RBP12.4□□□□□ -0.42
HERPUD1-215ENST00000568676 NKAPLQ5M9Q1 402 aa12.4□□□□□ -0.42
HERPUD1-215ENST00000568676 Q6P435 159 aa12.4□□□□□ -0.42
HERPUD1-215ENST00000568676 TGIF2LXQ8IUE1 241 aa12.4□□□□□ -0.42
HERPUD1-215ENST00000568676 RNF152Q8N8N0 203 aa12.4□□□□□ -0.42
HERPUD1-215ENST00000568676 OR10H4Q8NGA5 316 aa12.4□□□□□ -0.42
HERPUD1-215ENST00000568676 OR51T1Q8NGJ9 327 aa12.4□□□□□ -0.42
HERPUD1-215ENST00000568676 RFKQ969G6 155 aa12.4□□□□□ -0.42
HERPUD1-215ENST00000568676 FGGYQ96C11 551 aa12.4□□□□□ -0.42
HERPUD1-215ENST00000568676 BARHL1Q9BZE3 327 aa12.4□□□□□ -0.42
HERPUD1-215ENST00000568676 DCLRE1BQ9H816 532 aa12.4□□□□□ -0.42
HERPUD1-215ENST00000568676 LIN7CQ9NUP9 197 aaKnown RBP12.4□□□□□ -0.42
HERPUD1-215ENST00000568676 M0R129 80 aa12.39□□□□□ -0.43
HERPUD1-215ENST00000568676 IL1AP01583 271 aa12.39□□□□□ -0.43
HERPUD1-215ENST00000568676 IGKV1D-33P01593 117 aa12.39□□□□□ -0.43
HERPUD1-215ENST00000568676 IGKV1-33P01594 117 aa12.39□□□□□ -0.43
HERPUD1-215ENST00000568676 ELANEP08246 267 aa12.39□□□□□ -0.43
HERPUD1-215ENST00000568676 RPSAP08865 295 aaKnown RBP12.39□□□□□ -0.43
HERPUD1-215ENST00000568676 KIR3DL2P43630 455 aa12.39□□□□□ -0.43
HERPUD1-215ENST00000568676 KCNJ3P48549 501 aa12.39□□□□□ -0.43
HERPUD1-215ENST00000568676 INSL3P51460 131 aa12.39□□□□□ -0.43
HERPUD1-215ENST00000568676 RAB25P57735 213 aa12.39□□□□□ -0.43
HERPUD1-215ENST00000568676 FOXE3Q13461 319 aa12.39□□□□□ -0.43
HERPUD1-215ENST00000568676 ATXN7L3Q14CW9 347 aaPredicted RBP12.39□□□□□ -0.43
HERPUD1-215ENST00000568676 FDX2Q6P4F2 183 aa12.39□□□□□ -0.43
HERPUD1-215ENST00000568676 RDH10Q8IZV5 341 aa12.39□□□□□ -0.43
HERPUD1-215ENST00000568676 OR2G2Q8NGZ5 317 aa12.39□□□□□ -0.43
HERPUD1-215ENST00000568676 CALYQ9NYX4 217 aa12.39□□□□□ -0.43
HERPUD1-215ENST00000568676 IDI2-AS1Q9NZ38 188 aa12.39□□□□□ -0.43
HERPUD1-215ENST00000568676 GNG8Q9UK08 70 aa12.39□□□□□ -0.43
HERPUD1-215ENST00000568676 PSG11Q9UQ72 335 aa12.39□□□□□ -0.43
HERPUD1-215ENST00000568676 MEIKINA0A087WXM9 373 aa12.38□□□□□ -0.43
HERPUD1-215ENST00000568676 NPIPB11E5RHQ5 1161 aa12.38□□□□□ -0.43
HERPUD1-215ENST00000568676 RRP9O43818 475 aaKnown RBP12.38□□□□□ -0.43
HERPUD1-215ENST00000568676 MPZL2O60487 215 aa12.38□□□□□ -0.43
HERPUD1-215ENST00000568676 GLP1RP43220 463 aa12.38□□□□□ -0.43
HERPUD1-215ENST00000568676 MTNR1BP49286 362 aa12.38□□□□□ -0.43
HERPUD1-215ENST00000568676 CCR9P51686 369 aa12.38□□□□□ -0.43
HERPUD1-215ENST00000568676 ZNF816Q0VGE8 651 aaPredicted RBP12.38□□□□□ -0.43
HERPUD1-215ENST00000568676 KDM4DQ6B0I6 523 aa12.38□□□□□ -0.43
HERPUD1-215ENST00000568676 IZUMO1Q8IYV9 350 aa12.38□□□□□ -0.43
HERPUD1-215ENST00000568676 Q8NFD4 153 aa12.38□□□□□ -0.43
HERPUD1-215ENST00000568676 OR8J1Q8NGP2 316 aa12.38□□□□□ -0.43
HERPUD1-215ENST00000568676 OR10X1Q8NGY0 326 aa12.38□□□□□ -0.43
HERPUD1-215ENST00000568676 UTP4Q969X6 686 aaKnown RBP12.38□□□□□ -0.43
HERPUD1-215ENST00000568676 CPNE2Q96FN4 548 aaPredicted RBP12.38□□□□□ -0.43
HERPUD1-215ENST00000568676 OSBPL10Q9BXB5 764 aa12.38□□□□□ -0.43
HERPUD1-215ENST00000568676 ABCG5Q9H222 651 aa12.38□□□□□ -0.43
HERPUD1-215ENST00000568676 PPIL3Q9H2H8 161 aaKnown RBP12.38□□□□□ -0.43
HERPUD1-215ENST00000568676 CHCHD3Q9NX63 227 aaKnown RBP12.38□□□□□ -0.43
HERPUD1-215ENST00000568676 LINC00527Q9UJ94 153 aa12.38□□□□□ -0.43
HERPUD1-215ENST00000568676 KIAA2026Q5HYC2 2103 aa12.37□□□□□ -0.43
HERPUD1-215ENST00000568676 SEC14L6B5MCN3 397 aa12.37□□□□□ -0.43
HERPUD1-215ENST00000568676 G3V2T6 193 aa12.37□□□□□ -0.43
HERPUD1-215ENST00000568676 CCRL2O00421 344 aa12.37□□□□□ -0.43
HERPUD1-215ENST00000568676 APOL3O95236 402 aa12.37□□□□□ -0.43
HERPUD1-215ENST00000568676 GAPDHP04406 335 aaKnown RBP12.37□□□□□ -0.43
HERPUD1-215ENST00000568676 EPHA2P29317 976 aa12.37□□□□□ -0.43
HERPUD1-215ENST00000568676 ECI1P42126 302 aa12.37□□□□□ -0.43
HERPUD1-215ENST00000568676 GPR12P47775 334 aa12.37□□□□□ -0.43
HERPUD1-215ENST00000568676 LUMP51884 338 aaPredicted RBP12.37□□□□□ -0.43
HERPUD1-215ENST00000568676 GPR50Q13585 617 aa12.37□□□□□ -0.43
HERPUD1-215ENST00000568676 HNF4GQ14541 408 aa12.37□□□□□ -0.43
HERPUD1-215ENST00000568676 CDK5R1Q15078 307 aa12.37□□□□□ -0.43
HERPUD1-215ENST00000568676 DNAL1Q4LDG9 190 aa12.37□□□□□ -0.43
HERPUD1-215ENST00000568676 ELP2Q6IA86 826 aa12.37□□□□□ -0.43
HERPUD1-215ENST00000568676 MUC7Q8TAX7 377 aa12.37□□□□□ -0.43
HERPUD1-215ENST00000568676 RFT1Q96AA3 541 aa12.37□□□□□ -0.43
HERPUD1-215ENST00000568676 DUX3Q96PT4 197 aa12.37□□□□□ -0.43
HERPUD1-215ENST00000568676 PRR25Q96S07 402 aa12.37□□□□□ -0.43
HERPUD1-215ENST00000568676 MYCBPQ99417 103 aaPredicted RBP12.37□□□□□ -0.43
HERPUD1-215ENST00000568676 ING3Q9NXR8 418 aa12.37□□□□□ -0.43
HERPUD1-215ENST00000568676 FRRS1LQ9P0K9 344 aa12.37□□□□□ -0.43
HERPUD1-215ENST00000568676 KIF25Q9UIL4 384 aa12.37□□□□□ -0.43
HERPUD1-215ENST00000568676 ZNF580Q9UK33 172 aa12.37□□□□□ -0.43
HERPUD1-215ENST00000568676 ZNF256Q9Y2P7 627 aaPredicted RBP12.37□□□□□ -0.43
HERPUD1-215ENST00000568676 NCBP2LA6PVI3 153 aaKnown RBP12.36□□□□□ -0.43
HERPUD1-215ENST00000568676 H0YJX3 145 aa12.36□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 37 ms