RNA–Protein interactions for RNA: ENST00000567992.1

CLK3-220, Transcript of CDC like kinase 3, humanhuman

TSL 2

Gene CLK3, Length 603 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLK3-220ENST00000567992 LINC00596Q86U02 117 aa7.99□□□□□ -1.13
CLK3-220ENST00000567992 C17orf50Q8WW18 174 aa7.99□□□□□ -1.13
CLK3-220ENST00000567992 TMEM158Q8WZ71 300 aa7.99□□□□□ -1.13
CLK3-220ENST00000567992 CORO2AQ92828 525 aa7.99□□□□□ -1.13
CLK3-220ENST00000567992 SLC25A28Q96A46 364 aa7.99□□□□□ -1.13
CLK3-220ENST00000567992 ZNF714Q96N38 554 aa7.99□□□□□ -1.13
CLK3-220ENST00000567992 JMJD8Q96S16 334 aa7.99□□□□□ -1.13
CLK3-220ENST00000567992 KCNK15Q9H427 330 aa7.99□□□□□ -1.13
CLK3-220ENST00000567992 TCF7L1Q9HCS4 588 aa7.99□□□□□ -1.13
CLK3-220ENST00000567992 UBE2J1Q9Y385 318 aaPredicted RBP7.99□□□□□ -1.13
CLK3-220ENST00000567992 KIAA2026Q5HYC2 2103 aa7.99□□□□□ -1.13
CLK3-220ENST00000567992 TRDV1A0A1B0GX56 115 aa7.98□□□□□ -1.13
CLK3-220ENST00000567992 A0A1W2PRD5 423 aa7.98□□□□□ -1.13
CLK3-220ENST00000567992 A0A1W2PRF3 423 aa7.98□□□□□ -1.13
CLK3-220ENST00000567992 A0A1W2PRM7 423 aa7.98□□□□□ -1.13
CLK3-220ENST00000567992 ODF3BA8MYP8 253 aa7.98□□□□□ -1.13
CLK3-220ENST00000567992 CCRL2O00421 344 aa7.98□□□□□ -1.13
CLK3-220ENST00000567992 HOXA3O43365 443 aaPredicted RBP7.98□□□□□ -1.13
CLK3-220ENST00000567992 ARL6IP5O75915 188 aa7.98□□□□□ -1.13
CLK3-220ENST00000567992 CLPXO76031 633 aa7.98□□□□□ -1.13
CLK3-220ENST00000567992 OR7C1O76099 320 aaPredicted RBP7.98□□□□□ -1.13
CLK3-220ENST00000567992 CSTBP04080 98 aaKnown RBP7.98□□□□□ -1.13
CLK3-220ENST00000567992 TFAP2AP05549 437 aa7.98□□□□□ -1.13
CLK3-220ENST00000567992 RNASE1P07998 156 aaKnown RBP7.98□□□□□ -1.13
CLK3-220ENST00000567992 CGB3P0DN86 165 aa7.98□□□□□ -1.13
CLK3-220ENST00000567992 CGB7P0DN87 165 aa7.98□□□□□ -1.13
CLK3-220ENST00000567992 IGHV1-8P0DP01 117 aa7.98□□□□□ -1.13
CLK3-220ENST00000567992 VSIG8P0DPA2 414 aa7.98□□□□□ -1.13
CLK3-220ENST00000567992 MGMTP16455 207 aa7.98□□□□□ -1.13
CLK3-220ENST00000567992 COX7A1P24310 79 aa7.98□□□□□ -1.13
CLK3-220ENST00000567992 CALRP27797 417 aaKnown RBP7.98□□□□□ -1.13
CLK3-220ENST00000567992 PSMB9P28065 219 aa7.98□□□□□ -1.13
CLK3-220ENST00000567992 SAA4P35542 130 aa7.98□□□□□ -1.13
CLK3-220ENST00000567992 GDNFP39905 211 aa7.98□□□□□ -1.13
CLK3-220ENST00000567992 QRFPP83859 136 aa7.98□□□□□ -1.13
CLK3-220ENST00000567992 BAMBIQ13145 260 aa7.98□□□□□ -1.13
CLK3-220ENST00000567992 UNC119Q13432 240 aa7.98□□□□□ -1.13
CLK3-220ENST00000567992 GPR176Q14439 515 aa7.98□□□□□ -1.13
CLK3-220ENST00000567992 TAF9Q16594 264 aa7.98□□□□□ -1.13
CLK3-220ENST00000567992 C17orf58Q2M2W7 97 aa7.98□□□□□ -1.13
CLK3-220ENST00000567992 KRBOX4Q5JUW0 171 aa7.98□□□□□ -1.13
CLK3-220ENST00000567992 LDLRAD2Q5SZI1 272 aa7.98□□□□□ -1.13
CLK3-220ENST00000567992 GLT8D1Q68CQ7 371 aa7.98□□□□□ -1.13
CLK3-220ENST00000567992 SIGIRRQ6IA17 410 aa7.98□□□□□ -1.13
CLK3-220ENST00000567992 OR10K2Q6IF99 312 aa7.98□□□□□ -1.13
CLK3-220ENST00000567992 LDLRAD3Q86YD5 345 aa7.98□□□□□ -1.13
CLK3-220ENST00000567992 SUMF2Q8NBJ7 301 aa7.98□□□□□ -1.13
CLK3-220ENST00000567992 FAM216AQ8WUB2 273 aa7.98□□□□□ -1.13
CLK3-220ENST00000567992 FCGR1BQ92637 280 aa7.98□□□□□ -1.13
CLK3-220ENST00000567992 FOXRED1Q96CU9 486 aaPredicted RBP7.98□□□□□ -1.13
CLK3-220ENST00000567992 DGCR14Q96DF8 476 aaKnown RBP7.98□□□□□ -1.13
CLK3-220ENST00000567992 MRPS24Q96EL2 167 aaKnown RBP7.98□□□□□ -1.13
CLK3-220ENST00000567992 Q96M66 194 aa7.98□□□□□ -1.13
CLK3-220ENST00000567992 DUX5Q96PT3 197 aa7.98□□□□□ -1.13
CLK3-220ENST00000567992 S100A13Q99584 98 aa7.98□□□□□ -1.13
CLK3-220ENST00000567992 DPCDQ9BVM2 203 aaPredicted RBP7.98□□□□□ -1.13
CLK3-220ENST00000567992 BANF2Q9H503 90 aa7.98□□□□□ -1.13
CLK3-220ENST00000567992 ZNRD1Q9P1U0 126 aa7.98□□□□□ -1.13
CLK3-220ENST00000567992 AK6Q9Y3D8 172 aaKnown RBP7.98□□□□□ -1.13
CLK3-220ENST00000567992 MEIOCA2RUB1 952 aa7.97□□□□□ -1.13
CLK3-220ENST00000567992 TMEM14DPA8MWL7 114 aa7.97□□□□□ -1.13
CLK3-220ENST00000567992 TRIM77I1YAP6 450 aa7.97□□□□□ -1.13
CLK3-220ENST00000567992 SLC17A2O00624 439 aa7.97□□□□□ -1.13
CLK3-220ENST00000567992 UBBP0CG47 229 aa7.97□□□□□ -1.13
CLK3-220ENST00000567992 GALP22466 123 aa7.97□□□□□ -1.13
CLK3-220ENST00000567992 HTR2CP28335 458 aa7.97□□□□□ -1.13
CLK3-220ENST00000567992 KCNJ3P48549 501 aa7.97□□□□□ -1.13
CLK3-220ENST00000567992 MIDNQ504T8 468 aa7.97□□□□□ -1.13
CLK3-220ENST00000567992 UTF1Q5T230 341 aa7.97□□□□□ -1.13
CLK3-220ENST00000567992 SYT6Q5T7P8 510 aaPredicted RBP7.97□□□□□ -1.13
CLK3-220ENST00000567992 PRAMEF5Q5TYX0 476 aa7.97□□□□□ -1.13
CLK3-220ENST00000567992 ZNF626Q68DY1 528 aa7.97□□□□□ -1.13
CLK3-220ENST00000567992 BRICD5Q6PL45 260 aa7.97□□□□□ -1.13
CLK3-220ENST00000567992 BAIAP2L2Q6UXY1 529 aa7.97□□□□□ -1.13
CLK3-220ENST00000567992 RBMS3Q6XE24 437 aaKnown RBP7.97□□□□□ -1.13
CLK3-220ENST00000567992 OR11H6Q8NGC7 330 aa7.97□□□□□ -1.13
CLK3-220ENST00000567992 OR6M1Q8NGM8 313 aa7.97□□□□□ -1.13
CLK3-220ENST00000567992 OR13A1Q8NGR1 328 aa7.97□□□□□ -1.13
CLK3-220ENST00000567992 FAM46BQ96A09 425 aa7.97□□□□□ -1.13
CLK3-220ENST00000567992 SELENOIQ9C0D9 397 aa7.97□□□□□ -1.13
CLK3-220ENST00000567992 RBM38Q9H0Z9 239 aaKnown RBP7.97□□□□□ -1.13
CLK3-220ENST00000567992 SLITRK2Q9H156 845 aa7.97□□□□□ -1.13
CLK3-220ENST00000567992 NCOR1P1Q9H4R4 102 aa7.97□□□□□ -1.13
CLK3-220ENST00000567992 ZMAT3Q9HA38 289 aaKnown RBP7.97□□□□□ -1.13
CLK3-220ENST00000567992 ING3Q9NXR8 418 aa7.97□□□□□ -1.13
CLK3-220ENST00000567992 TAS2R3Q9NYW6 316 aa7.97□□□□□ -1.13
CLK3-220ENST00000567992 GHRLQ9UBU3 117 aa7.97□□□□□ -1.13
CLK3-220ENST00000567992 KIF25Q9UIL4 384 aa7.97□□□□□ -1.13
CLK3-220ENST00000567992 SESN1Q9Y6P5 492 aa7.97□□□□□ -1.13
CLK3-220ENST00000567992 TRGV10A0A0A0MS01 117 aa7.96□□□□□ -1.14
CLK3-220ENST00000567992 A0A0A6YYD4 124 aa7.96□□□□□ -1.14
CLK3-220ENST00000567992 TRAV1-2A0A0B4J238 106 aa7.96□□□□□ -1.14
CLK3-220ENST00000567992 hCG_1809904A0A1W2PP81 198 aa7.96□□□□□ -1.14
CLK3-220ENST00000567992 A0A1W2PPE2 198 aa7.96□□□□□ -1.14
CLK3-220ENST00000567992 A0A1W2PR64 198 aa7.96□□□□□ -1.14
CLK3-220ENST00000567992 A0A1W2PRV1 198 aa7.96□□□□□ -1.14
CLK3-220ENST00000567992 FUOMA2VDF0 154 aa7.96□□□□□ -1.14
CLK3-220ENST00000567992 FAM90A10PA6NDY2 464 aa7.96□□□□□ -1.14
CLK3-220ENST00000567992 FAM90A18PA6NE21 464 aa7.96□□□□□ -1.14
CLK3-220ENST00000567992 FAM90A16PA6NEW6 464 aa7.96□□□□□ -1.14
Retrieved 100 of 20,778 RNA–protein pairs in 38.7 ms