RNA–Protein interactions for RNA: ENST00000567638.1

SCAMP2-209, Transcript of secretory carrier membrane protein 2, humanhuman

TSL 2

Gene SCAMP2, Length 678 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAMP2-209ENST00000567638 NOTCH3Q9UM47 2321 aa12.02□□□□□ -0.49
SCAMP2-209ENST00000567638 KBTBD11-OT1A0A1B0GTJ5 212 aa12.02□□□□□ -0.49
SCAMP2-209ENST00000567638 OOSP1A8MZH6 123 aa12.02□□□□□ -0.49
SCAMP2-209ENST00000567638 LY6LH3BQJ8 138 aa12.02□□□□□ -0.49
SCAMP2-209ENST00000567638 HSPB6O14558 160 aa12.02□□□□□ -0.49
SCAMP2-209ENST00000567638 MAGEB3O15480 346 aa12.02□□□□□ -0.49
SCAMP2-209ENST00000567638 LIMS3P0CW19 117 aa12.02□□□□□ -0.49
SCAMP2-209ENST00000567638 LIMS4P0CW20 117 aa12.02□□□□□ -0.49
SCAMP2-209ENST00000567638 CGB3P0DN86 165 aa12.02□□□□□ -0.49
SCAMP2-209ENST00000567638 CGB7P0DN87 165 aa12.02□□□□□ -0.49
SCAMP2-209ENST00000567638 RAB3AP20336 220 aa12.02□□□□□ -0.49
SCAMP2-209ENST00000567638 NFYBP25208 207 aa12.02□□□□□ -0.49
SCAMP2-209ENST00000567638 GLP1RP43220 463 aa12.02□□□□□ -0.49
SCAMP2-209ENST00000567638 GTF2A1P52655 376 aaPredicted RBP12.02□□□□□ -0.49
SCAMP2-209ENST00000567638 CD83Q01151 205 aa12.02□□□□□ -0.49
SCAMP2-209ENST00000567638 IL13RA2Q14627 380 aa12.02□□□□□ -0.49
SCAMP2-209ENST00000567638 ZSCAN26Q16670 478 aa12.02□□□□□ -0.49
SCAMP2-209ENST00000567638 KLHL22Q53GT1 634 aa12.02□□□□□ -0.49
SCAMP2-209ENST00000567638 PAN3Q58A45 887 aaKnown RBP12.02□□□□□ -0.49
SCAMP2-209ENST00000567638 UTF1Q5T230 341 aa12.02□□□□□ -0.49
SCAMP2-209ENST00000567638 CCDC144NLQ6NUI1 221 aa12.02□□□□□ -0.49
SCAMP2-209ENST00000567638 REC114Q7Z4M0 266 aa12.02□□□□□ -0.49
SCAMP2-209ENST00000567638 PQLC1Q8N2U9 271 aa12.02□□□□□ -0.49
SCAMP2-209ENST00000567638 OR51A2Q8NGJ7 313 aa12.02□□□□□ -0.49
SCAMP2-209ENST00000567638 CNIH3Q8TBE1 160 aa12.02□□□□□ -0.49
SCAMP2-209ENST00000567638 TNFAIP8L1Q8WVP5 186 aa12.02□□□□□ -0.49
SCAMP2-209ENST00000567638 RGP1Q92546 391 aaPredicted RBP12.02□□□□□ -0.49
SCAMP2-209ENST00000567638 NR1H4Q96RI1 486 aaPredicted RBP12.02□□□□□ -0.49
SCAMP2-209ENST00000567638 GPER1Q99527 375 aa12.02□□□□□ -0.49
SCAMP2-209ENST00000567638 JAM3Q9BX67 310 aa12.02□□□□□ -0.49
SCAMP2-209ENST00000567638 NCOR1P1Q9H4R4 102 aa12.02□□□□□ -0.49
SCAMP2-209ENST00000567638 S100A14Q9HCY8 104 aa12.02□□□□□ -0.49
SCAMP2-209ENST00000567638 KIF25Q9UIL4 384 aa12.02□□□□□ -0.49
SCAMP2-209ENST00000567638 MEIKINA0A087WXM9 373 aa12.01□□□□□ -0.49
SCAMP2-209ENST00000567638 TRAV24A0A0B4J272 114 aa12.01□□□□□ -0.49
SCAMP2-209ENST00000567638 A0A1W2PRX2 142 aa12.01□□□□□ -0.49
SCAMP2-209ENST00000567638 LPLP06858 475 aa12.01□□□□□ -0.49
SCAMP2-209ENST00000567638 MNDAP41218 407 aa12.01□□□□□ -0.49
SCAMP2-209ENST00000567638 OR3A4PP47883 348 aa12.01□□□□□ -0.49
SCAMP2-209ENST00000567638 SOX2P48431 317 aa12.01□□□□□ -0.49
SCAMP2-209ENST00000567638 RBM39Q14498 530 aaKnown RBP12.01□□□□□ -0.49
SCAMP2-209ENST00000567638 ABCA11PQ4W5N1 156 aa12.01□□□□□ -0.49
SCAMP2-209ENST00000567638 Q6ZPA2 131 aa12.01□□□□□ -0.49
SCAMP2-209ENST00000567638 CENPVQ7Z7K6 275 aaPredicted RBP12.01□□□□□ -0.49
SCAMP2-209ENST00000567638 SATL1Q86VE3 508 aa12.01□□□□□ -0.49
SCAMP2-209ENST00000567638 ZNF565Q8N9K5 539 aa12.01□□□□□ -0.49
SCAMP2-209ENST00000567638 OR13A1Q8NGR1 328 aa12.01□□□□□ -0.49
SCAMP2-209ENST00000567638 OR9G1Q8NH87 305 aa12.01□□□□□ -0.49
SCAMP2-209ENST00000567638 FAM192AQ9GZU8 254 aa12.01□□□□□ -0.49
SCAMP2-209ENST00000567638 FGF20Q9NP95 211 aaPredicted RBP12.01□□□□□ -0.49
SCAMP2-209ENST00000567638 TAS2R4Q9NYW5 299 aa12.01□□□□□ -0.49
SCAMP2-209ENST00000567638 CALYQ9NYX4 217 aa12.01□□□□□ -0.49
SCAMP2-209ENST00000567638 AMY1AP04745 511 aa12□□□□□ -0.49
SCAMP2-209ENST00000567638 AMY2AP04746 511 aa12□□□□□ -0.49
SCAMP2-209ENST00000567638 CD2P06729 351 aa12□□□□□ -0.49
SCAMP2-209ENST00000567638 PAX5Q02548 391 aa12□□□□□ -0.49
SCAMP2-209ENST00000567638 RSU1Q15404 277 aa12□□□□□ -0.49
SCAMP2-209ENST00000567638 SMN1Q16637 294 aaKnown RBP12□□□□□ -0.49
SCAMP2-209ENST00000567638 PIGYQ3MUY2 71 aa12□□□□□ -0.49
SCAMP2-209ENST00000567638 CCDC58Q4VC31 144 aa12□□□□□ -0.49
SCAMP2-209ENST00000567638 TCTEX1D4Q5JR98 221 aa12□□□□□ -0.49
SCAMP2-209ENST00000567638 RSBN1Q5VWQ0 802 aaPredicted RBP12□□□□□ -0.49
SCAMP2-209ENST00000567638 XAF1Q6GPH4 301 aa12□□□□□ -0.49
SCAMP2-209ENST00000567638 ASCL4Q6XD76 172 aa12□□□□□ -0.49
SCAMP2-209ENST00000567638 Q8NFD4 153 aa12□□□□□ -0.49
SCAMP2-209ENST00000567638 OR10K1Q8NGX5 313 aa12□□□□□ -0.49
SCAMP2-209ENST00000567638 PLPPR1Q8TBJ4 325 aa12□□□□□ -0.49
SCAMP2-209ENST00000567638 GPR148Q8TDV2 347 aa12□□□□□ -0.49
SCAMP2-209ENST00000567638 TOMM40LQ969M1 308 aa12□□□□□ -0.49
SCAMP2-209ENST00000567638 RPEQ96AT9 228 aa12□□□□□ -0.49
SCAMP2-209ENST00000567638 PHF21AQ96BD5 680 aa12□□□□□ -0.49
SCAMP2-209ENST00000567638 BARHL1Q9BZE3 327 aa12□□□□□ -0.49
SCAMP2-209ENST00000567638 LINC00574Q9H8X3 128 aa12□□□□□ -0.49
SCAMP2-209ENST00000567638 PCDHB16Q9NRJ7 776 aa12□□□□□ -0.49
SCAMP2-209ENST00000567638 IDI2-AS1Q9NZ38 188 aa12□□□□□ -0.49
SCAMP2-209ENST00000567638 AMMECR1Q9Y4X0 333 aaPredicted RBP12□□□□□ -0.49
SCAMP2-209ENST00000567638 SH2D7A6NKC9 451 aaPredicted RBP11.99□□□□□ -0.49
SCAMP2-209ENST00000567638 J3QR06 171 aa11.99□□□□□ -0.49
SCAMP2-209ENST00000567638 M0QZK8 103 aa11.99□□□□□ -0.49
SCAMP2-209ENST00000567638 WBP4O75554 376 aaKnown RBP11.99□□□□□ -0.49
SCAMP2-209ENST00000567638 IL1AP01583 271 aa11.99□□□□□ -0.49
SCAMP2-209ENST00000567638 C21orf33P30042 268 aaPredicted RBP11.99□□□□□ -0.49
SCAMP2-209ENST00000567638 KCNJ3P48549 501 aa11.99□□□□□ -0.49
SCAMP2-209ENST00000567638 RPL22L1Q6P5R6 122 aaKnown RBP11.99□□□□□ -0.49
SCAMP2-209ENST00000567638 ZNF555Q8NEP9 628 aa11.99□□□□□ -0.49
SCAMP2-209ENST00000567638 OR4X2Q8NGF9 303 aa11.99□□□□□ -0.49
SCAMP2-209ENST00000567638 SGCDQ92629 289 aa11.99□□□□□ -0.49
SCAMP2-209ENST00000567638 TMEM106AQ96A25 262 aa11.99□□□□□ -0.49
SCAMP2-209ENST00000567638 NECAP2Q9NVZ3 263 aa11.99□□□□□ -0.49
SCAMP2-209ENST00000567638 SMPD3Q9NY59 655 aaPredicted RBP11.99□□□□□ -0.49
SCAMP2-209ENST00000567638 MOB4Q9Y3A3 225 aa11.99□□□□□ -0.49
SCAMP2-209ENST00000567638 TSSC4Q9Y5U2 329 aaPredicted RBP11.99□□□□□ -0.49
SCAMP2-209ENST00000567638 HSPE1-MOB4S4R3N1 261 aa11.99□□□□□ -0.49
SCAMP2-209ENST00000567638 A0A1W2PPI3 338 aa11.98□□□□□ -0.49
SCAMP2-209ENST00000567638 TCRBV4S1A1TA0A5B7 111 aa11.98□□□□□ -0.49
SCAMP2-209ENST00000567638 FAM90A18PA6NE21 464 aa11.98□□□□□ -0.49
SCAMP2-209ENST00000567638 FAM90A16PA6NEW6 464 aa11.98□□□□□ -0.49
SCAMP2-209ENST00000567638 FAM90A20PA6NIJ5 464 aa11.98□□□□□ -0.49
SCAMP2-209ENST00000567638 FAM90A9PA6NNJ1 464 aa11.98□□□□□ -0.49
SCAMP2-209ENST00000567638 FAM90A12PA8MX19 464 aa11.98□□□□□ -0.49
Retrieved 100 of 20,778 RNA–protein pairs in 35.5 ms