RNA–Protein interactions for RNA: ENST00000567250.5

SF3B3-208, Transcript of splicing factor 3b subunit 3, humanhuman

TSL 3

Gene SF3B3, Length 1,084 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3B3-208ENST00000567250 GPR157Q5UAW9 335 aa10.03□□□□□ -0.8
SF3B3-208ENST00000567250 NCR3LG1Q68D85 454 aa10.03□□□□□ -0.8
SF3B3-208ENST00000567250 SFXN4Q6P4A7 337 aa10.03□□□□□ -0.8
SF3B3-208ENST00000567250 C1orf122Q6ZSJ8 110 aa10.03□□□□□ -0.8
SF3B3-208ENST00000567250 IL17RELQ6ZVW7 336 aa10.03□□□□□ -0.8
SF3B3-208ENST00000567250 SUMF2Q8NBJ7 301 aa10.03□□□□□ -0.8
SF3B3-208ENST00000567250 OR4M1Q8NGD0 313 aa10.03□□□□□ -0.8
SF3B3-208ENST00000567250 OR51D1Q8NGF3 324 aa10.03□□□□□ -0.8
SF3B3-208ENST00000567250 SLC25A28Q96A46 364 aa10.03□□□□□ -0.8
SF3B3-208ENST00000567250 ZNF714Q96N38 554 aa10.03□□□□□ -0.8
SF3B3-208ENST00000567250 NEDD4LQ96PU5 975 aa10.03□□□□□ -0.8
SF3B3-208ENST00000567250 TM2D1Q9BX74 207 aa10.03□□□□□ -0.8
SF3B3-208ENST00000567250 LIN7BQ9HAP6 207 aa10.03□□□□□ -0.8
SF3B3-208ENST00000567250 OR6C3Q9NZP0 311 aa10.03□□□□□ -0.8
SF3B3-208ENST00000567250 FBLN5Q9UBX5 448 aa10.03□□□□□ -0.8
SF3B3-208ENST00000567250 UBE2J1Q9Y385 318 aaPredicted RBP10.03□□□□□ -0.8
SF3B3-208ENST00000567250 NF1P21359 2839 aa10.02□□□□□ -0.8
SF3B3-208ENST00000567250 TMEM30CPA0ZSE6 113 aa10.02□□□□□ -0.81
SF3B3-208ENST00000567250 ODAMA1E959 279 aa10.02□□□□□ -0.81
SF3B3-208ENST00000567250 NOL3O60936 208 aaKnown RBP10.02□□□□□ -0.81
SF3B3-208ENST00000567250 PDCD6O75340 191 aa10.02□□□□□ -0.81
SF3B3-208ENST00000567250 CA11O75493 328 aa10.02□□□□□ -0.81
SF3B3-208ENST00000567250 GABARAPO95166 117 aa10.02□□□□□ -0.81
SF3B3-208ENST00000567250 RBP4P02753 201 aa10.02□□□□□ -0.81
SF3B3-208ENST00000567250 RAB6AP20340 208 aa10.02□□□□□ -0.81
SF3B3-208ENST00000567250 FUT3P21217 361 aa10.02□□□□□ -0.81
SF3B3-208ENST00000567250 ALDH3B2P48448 385 aa10.02□□□□□ -0.81
SF3B3-208ENST00000567250 CLDN12P56749 244 aa10.02□□□□□ -0.81
SF3B3-208ENST00000567250 BPIFB3P59826 476 aa10.02□□□□□ -0.81
SF3B3-208ENST00000567250 GUCA2AQ02747 115 aa10.02□□□□□ -0.81
SF3B3-208ENST00000567250 ZNF273Q14593 569 aa10.02□□□□□ -0.81
SF3B3-208ENST00000567250 RAB12Q6IQ22 244 aa10.02□□□□□ -0.81
SF3B3-208ENST00000567250 VMO1Q7Z5L0 202 aa10.02□□□□□ -0.81
SF3B3-208ENST00000567250 ANKRD13BQ86YJ7 626 aa10.02□□□□□ -0.81
SF3B3-208ENST00000567250 PTX4Q96A99 478 aa10.02□□□□□ -0.81
SF3B3-208ENST00000567250 NCOR1P1Q9H4R4 102 aa10.02□□□□□ -0.81
SF3B3-208ENST00000567250 OPN4Q9UHM6 478 aa10.02□□□□□ -0.81
SF3B3-208ENST00000567250 DAPK2Q9UIK4 370 aa10.02□□□□□ -0.81
SF3B3-208ENST00000567250 NUP50Q9UKX7 468 aa10.02□□□□□ -0.81
SF3B3-208ENST00000567250 FN1P02751 2386 aaKnown RBP10.02□□□□□ -0.81
SF3B3-208ENST00000567250 MXRA5Q9NR99 2828 aa10.02□□□□□ -0.81
SF3B3-208ENST00000567250 MEIKINA0A087WXM9 373 aa10.01□□□□□ -0.81
SF3B3-208ENST00000567250 TMEM272A0A1B0GTI8 110 aa10.01□□□□□ -0.81
SF3B3-208ENST00000567250 SMIM30A4D0T7 59 aa10.01□□□□□ -0.81
SF3B3-208ENST00000567250 METTL21EPA6NDL7 271 aa10.01□□□□□ -0.81
SF3B3-208ENST00000567250 CLPXO76031 633 aa10.01□□□□□ -0.81
SF3B3-208ENST00000567250 SCGNO76038 276 aa10.01□□□□□ -0.81
SF3B3-208ENST00000567250 AVPP01185 164 aa10.01□□□□□ -0.81
SF3B3-208ENST00000567250 FSHBP01225 129 aa10.01□□□□□ -0.81
SF3B3-208ENST00000567250 IL1AP01583 271 aa10.01□□□□□ -0.81
SF3B3-208ENST00000567250 TFAP2AP05549 437 aa10.01□□□□□ -0.81
SF3B3-208ENST00000567250 ZNF728P0DKX0 622 aa10.01□□□□□ -0.81
SF3B3-208ENST00000567250 MMP9P14780 707 aa10.01□□□□□ -0.81
SF3B3-208ENST00000567250 EPHA1P21709 976 aa10.01□□□□□ -0.81
SF3B3-208ENST00000567250 RPL5P46777 297 aaKnown RBP10.01□□□□□ -0.81
SF3B3-208ENST00000567250 ERVFRD-1P60508 538 aa10.01□□□□□ -0.81
SF3B3-208ENST00000567250 LSM3P62310 102 aaKnown RBP10.01□□□□□ -0.81
SF3B3-208ENST00000567250 QRFPP83859 136 aa10.01□□□□□ -0.81
SF3B3-208ENST00000567250 AESQ08117 197 aa10.01□□□□□ -0.81
SF3B3-208ENST00000567250 C2orf76Q3KRA6 126 aa10.01□□□□□ -0.81
SF3B3-208ENST00000567250 NKAPLQ5M9Q1 402 aa10.01□□□□□ -0.81
SF3B3-208ENST00000567250 RSBN1Q5VWQ0 802 aaPredicted RBP10.01□□□□□ -0.81
SF3B3-208ENST00000567250 TMEM200BQ69YZ2 307 aa10.01□□□□□ -0.81
SF3B3-208ENST00000567250 SLC35E4Q6ICL7 350 aa10.01□□□□□ -0.81
SF3B3-208ENST00000567250 OR10K2Q6IF99 312 aa10.01□□□□□ -0.81
SF3B3-208ENST00000567250 METAP1DQ6UB28 335 aaPredicted RBP10.01□□□□□ -0.81
SF3B3-208ENST00000567250 NR2C2APQ86WQ0 139 aa10.01□□□□□ -0.81
SF3B3-208ENST00000567250 TPRX1Q8N7U7 411 aa10.01□□□□□ -0.81
SF3B3-208ENST00000567250 ZNF565Q8N9K5 539 aa10.01□□□□□ -0.81
SF3B3-208ENST00000567250 OR56B1Q8NGI3 324 aa10.01□□□□□ -0.81
SF3B3-208ENST00000567250 COQ2Q96H96 371 aa10.01□□□□□ -0.81
SF3B3-208ENST00000567250 TBX15Q96SF7 602 aa10.01□□□□□ -0.81
SF3B3-208ENST00000567250 LPAR5Q9H1C0 372 aa10.01□□□□□ -0.81
SF3B3-208ENST00000567250 KCNK15Q9H427 330 aa10.01□□□□□ -0.81
SF3B3-208ENST00000567250 RNF167Q9H6Y7 350 aa10.01□□□□□ -0.81
SF3B3-208ENST00000567250 UNKLQ9H9P5 680 aaKnown RBP10.01□□□□□ -0.81
SF3B3-208ENST00000567250 RAB9BQ9NP90 201 aa10.01□□□□□ -0.81
SF3B3-208ENST00000567250 SIRT7Q9NRC8 400 aa10.01□□□□□ -0.81
SF3B3-208ENST00000567250 TAS2R3Q9NYW6 316 aa10.01□□□□□ -0.81
SF3B3-208ENST00000567250 RAB22AQ9UL26 194 aa10.01□□□□□ -0.81
SF3B3-208ENST00000567250 PEX16Q9Y5Y5 336 aa10.01□□□□□ -0.81
SF3B3-208ENST00000567250 NAV3Q8IVL0 2385 aa10.01□□□□□ -0.81
SF3B3-208ENST00000567250 ZNF729A6NN14 1252 aaPredicted RBP10□□□□□ -0.81
SF3B3-208ENST00000567250 IFNA2P01563 188 aa10□□□□□ -0.81
SF3B3-208ENST00000567250 CCL3L1P16619 93 aa10□□□□□ -0.81
SF3B3-208ENST00000567250 PRTN3P24158 256 aa10□□□□□ -0.81
SF3B3-208ENST00000567250 FPR2P25090 351 aa10□□□□□ -0.81
SF3B3-208ENST00000567250 GLP1RP43220 463 aa10□□□□□ -0.81
SF3B3-208ENST00000567250 GLIPR1P48060 266 aa10□□□□□ -0.81
SF3B3-208ENST00000567250 SERPINB10P48595 397 aa10□□□□□ -0.81
SF3B3-208ENST00000567250 ARL6IP1Q15041 203 aa10□□□□□ -0.81
SF3B3-208ENST00000567250 GPR107Q5VW38 600 aa10□□□□□ -0.81
SF3B3-208ENST00000567250 OR52W1Q6IF63 320 aa10□□□□□ -0.81
SF3B3-208ENST00000567250 C1orf229Q6ZS94 237 aaPredicted RBP10□□□□□ -0.81
SF3B3-208ENST00000567250 TCF23Q7RTU1 214 aa10□□□□□ -0.81
SF3B3-208ENST00000567250 BPIFB2Q8N4F0 458 aa10□□□□□ -0.81
SF3B3-208ENST00000567250 RAB2BQ8WUD1 216 aa10□□□□□ -0.81
SF3B3-208ENST00000567250 LHX4Q969G2 390 aa10□□□□□ -0.81
SF3B3-208ENST00000567250 BCL7BQ9BQE9 202 aa10□□□□□ -0.81
SF3B3-208ENST00000567250 MS4A7Q9GZW8 240 aaPredicted RBP10□□□□□ -0.81
Retrieved 100 of 20,778 RNA–protein pairs in 25.6 ms