RNA–Protein interactions for RNA: ENST00000566016.5

SHCBP1-205, Transcript of SHC binding and spindle associated 1, humanhuman

TSL 1 (best)

Gene SHCBP1, Length 1,482 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHCBP1-205ENST00000566016 ZNF418Q8TF45 676 aaPredicted RBP17.26■□□□□ 0.35
SHCBP1-205ENST00000566016 LHX4Q969G2 390 aa17.26■□□□□ 0.35
SHCBP1-205ENST00000566016 SLC25A28Q96A46 364 aa17.26■□□□□ 0.35
SHCBP1-205ENST00000566016 DPCDQ9BVM2 203 aaPredicted RBP17.26■□□□□ 0.35
SHCBP1-205ENST00000566016 ODAMA1E959 279 aa17.25■□□□□ 0.35
SHCBP1-205ENST00000566016 TCF21O43680 179 aa17.25■□□□□ 0.35
SHCBP1-205ENST00000566016 CCL3L1P16619 93 aa17.25■□□□□ 0.35
SHCBP1-205ENST00000566016 CD36P16671 472 aa17.25■□□□□ 0.35
SHCBP1-205ENST00000566016 QRFPP83859 136 aa17.25■□□□□ 0.35
SHCBP1-205ENST00000566016 KRBOX4Q5JUW0 171 aa17.25■□□□□ 0.35
SHCBP1-205ENST00000566016 OR2W3Q7Z3T1 314 aa17.25■□□□□ 0.35
SHCBP1-205ENST00000566016 TPRX1Q8N7U7 411 aa17.25■□□□□ 0.35
SHCBP1-205ENST00000566016 SUMF2Q8NBJ7 301 aa17.25■□□□□ 0.35
SHCBP1-205ENST00000566016 CORO2AQ92828 525 aa17.25■□□□□ 0.35
SHCBP1-205ENST00000566016 SLC6A7Q99884 636 aa17.25■□□□□ 0.35
SHCBP1-205ENST00000566016 BARHL1Q9BZE3 327 aa17.25■□□□□ 0.35
SHCBP1-205ENST00000566016 SELENOIQ9C0D9 397 aa17.25■□□□□ 0.35
SHCBP1-205ENST00000566016 BANF2Q9H503 90 aa17.25■□□□□ 0.35
SHCBP1-205ENST00000566016 OCEL1Q9H607 264 aa17.25■□□□□ 0.35
SHCBP1-205ENST00000566016 TRGV10A0A0A0MS01 117 aa17.24■□□□□ 0.35
SHCBP1-205ENST00000566016 TMEM14DPA8MWL7 114 aa17.24■□□□□ 0.35
SHCBP1-205ENST00000566016 RNASEK-C17orf49H0YIS7 233 aa17.24■□□□□ 0.35
SHCBP1-205ENST00000566016 HSPB6O14558 160 aa17.24■□□□□ 0.35
SHCBP1-205ENST00000566016 GLIPR1P48060 266 aa17.24■□□□□ 0.35
SHCBP1-205ENST00000566016 UBE2E1P51965 193 aa17.24■□□□□ 0.35
SHCBP1-205ENST00000566016 ERVFRD-1P60508 538 aa17.24■□□□□ 0.35
SHCBP1-205ENST00000566016 RAB11BQ15907 218 aa17.24■□□□□ 0.35
SHCBP1-205ENST00000566016 TIMM50Q3ZCQ8 353 aa17.24■□□□□ 0.35
SHCBP1-205ENST00000566016 BRD3OSQ6XYD6 125 aa17.24■□□□□ 0.35
SHCBP1-205ENST00000566016 TMEM59Q9BXS4 323 aa17.24■□□□□ 0.35
SHCBP1-205ENST00000566016 TAS2R3Q9NYW6 316 aa17.24■□□□□ 0.35
SHCBP1-205ENST00000566016 OR6C3Q9NZP0 311 aa17.24■□□□□ 0.35
SHCBP1-205ENST00000566016 ZNF581Q9P0T4 197 aa17.24■□□□□ 0.35
SHCBP1-205ENST00000566016 FBLN5Q9UBX5 448 aa17.24■□□□□ 0.35
SHCBP1-205ENST00000566016 IGHV3OR16-10A0A075B7F0 116 aa17.24■□□□□ 0.35
SHCBP1-205ENST00000566016 GLAP06280 429 aa17.24■□□□□ 0.35
SHCBP1-205ENST00000566016 ARSBP15848 533 aa17.24■□□□□ 0.35
SHCBP1-205ENST00000566016 RAB3BP20337 219 aa17.24■□□□□ 0.35
SHCBP1-205ENST00000566016 HILS1P60008 231 aa17.24■□□□□ 0.35
SHCBP1-205ENST00000566016 UNC119Q13432 240 aa17.24■□□□□ 0.35
SHCBP1-205ENST00000566016 RSBN1Q5VWQ0 802 aaPredicted RBP17.24■□□□□ 0.35
SHCBP1-205ENST00000566016 GDPGP1Q6ZNW5 385 aa17.24■□□□□ 0.35
SHCBP1-205ENST00000566016 TPRA1Q86W33 373 aa17.24■□□□□ 0.35
SHCBP1-205ENST00000566016 C22orf15Q8WYQ4 148 aa17.24■□□□□ 0.35
SHCBP1-205ENST00000566016 FAM46BQ96A09 425 aa17.24■□□□□ 0.35
SHCBP1-205ENST00000566016 TM2D1Q9BX74 207 aa17.24■□□□□ 0.35
SHCBP1-205ENST00000566016 OR51E2Q9H255 320 aa17.24■□□□□ 0.35
SHCBP1-205ENST00000566016 GAL3ST2Q9H3Q3 398 aa17.24■□□□□ 0.35
SHCBP1-205ENST00000566016 PRDM13Q9H4Q3 707 aa17.24■□□□□ 0.35
SHCBP1-205ENST00000566016 IFITM5A6NNB3 132 aa17.23■□□□□ 0.35
SHCBP1-205ENST00000566016 MPIG6BO95866 241 aa17.23■□□□□ 0.35
SHCBP1-205ENST00000566016 GADD45AP24522 165 aa17.23■□□□□ 0.35
SHCBP1-205ENST00000566016 RPS27AP62979 156 aaKnown RBP17.23■□□□□ 0.35
SHCBP1-205ENST00000566016 BCL6BQ8N143 479 aaPredicted RBP17.23■□□□□ 0.35
SHCBP1-205ENST00000566016 KCTD7Q96MP8 289 aa17.23■□□□□ 0.35
SHCBP1-205ENST00000566016 JMJD8Q96S16 334 aa17.23■□□□□ 0.35
SHCBP1-205ENST00000566016 HEXA-AS1Q9H8Q6 139 aa17.23■□□□□ 0.35
SHCBP1-205ENST00000566016 STEAP1Q9UHE8 339 aa17.23■□□□□ 0.35
SHCBP1-205ENST00000566016 FBN1P35555 2871 aaKnown RBP17.23■□□□□ 0.35
SHCBP1-205ENST00000566016 AIPO00170 330 aa17.22■□□□□ 0.35
SHCBP1-205ENST00000566016 CLPXO76031 633 aa17.22■□□□□ 0.35
SHCBP1-205ENST00000566016 IGHV1-8P0DP01 117 aa17.22■□□□□ 0.35
SHCBP1-205ENST00000566016 RBM39Q14498 530 aaKnown RBP17.22■□□□□ 0.35
SHCBP1-205ENST00000566016 ATAD3CQ5T2N8 411 aa17.22■□□□□ 0.35
SHCBP1-205ENST00000566016 RUSC1-AS1Q66K80 236 aa17.22■□□□□ 0.35
SHCBP1-205ENST00000566016 SLC35E4Q6ICL7 350 aa17.22■□□□□ 0.35
SHCBP1-205ENST00000566016 HCP5Q6MZN7 132 aa17.22■□□□□ 0.35
SHCBP1-205ENST00000566016 TRAPPC6BQ86SZ2 158 aa17.22■□□□□ 0.35
SHCBP1-205ENST00000566016 PLPPR1Q8TBJ4 325 aa17.22■□□□□ 0.35
SHCBP1-205ENST00000566016 CHCHD6Q9BRQ6 235 aa17.22■□□□□ 0.35
SHCBP1-205ENST00000566016 KIF25Q9UIL4 384 aa17.22■□□□□ 0.35
SHCBP1-205ENST00000566016 CA11O75493 328 aa17.21■□□□□ 0.35
SHCBP1-205ENST00000566016 SMIM18P0DKX4 95 aa17.21■□□□□ 0.35
SHCBP1-205ENST00000566016 FUT3P21217 361 aa17.21■□□□□ 0.35
SHCBP1-205ENST00000566016 DLX1P56177 255 aa17.21■□□□□ 0.35
SHCBP1-205ENST00000566016 OR10A3P58181 314 aa17.21■□□□□ 0.35
SHCBP1-205ENST00000566016 KLRD1Q13241 179 aa17.21■□□□□ 0.35
SHCBP1-205ENST00000566016 P2RY14Q15391 338 aa17.21■□□□□ 0.35
SHCBP1-205ENST00000566016 SIGIRRQ6IA17 410 aa17.21■□□□□ 0.35
SHCBP1-205ENST00000566016 OR10K2Q6IF99 312 aa17.21■□□□□ 0.35
SHCBP1-205ENST00000566016 RAB12Q6IQ22 244 aa17.21■□□□□ 0.35
SHCBP1-205ENST00000566016 RBMS3Q6XE24 437 aaKnown RBP17.21■□□□□ 0.35
SHCBP1-205ENST00000566016 PIP4P2Q8N4L2 257 aa17.21■□□□□ 0.35
SHCBP1-205ENST00000566016 FAM3DQ96BQ1 224 aa17.21■□□□□ 0.35
SHCBP1-205ENST00000566016 YIPF6Q96EC8 236 aa17.21■□□□□ 0.35
SHCBP1-205ENST00000566016 ZNF729A6NN14 1252 aaPredicted RBP17.2■□□□□ 0.34
SHCBP1-205ENST00000566016 MCRIP1C9JLW8 97 aa17.2■□□□□ 0.34
SHCBP1-205ENST00000566016 NPFFO15130 113 aa17.2■□□□□ 0.34
SHCBP1-205ENST00000566016 PDCD6O75340 191 aa17.2■□□□□ 0.34
SHCBP1-205ENST00000566016 MIDNQ504T8 468 aa17.2■□□□□ 0.34
SHCBP1-205ENST00000566016 HEPN1Q6WQI6 88 aa17.2■□□□□ 0.34
SHCBP1-205ENST00000566016 NR2C2APQ86WQ0 139 aa17.2■□□□□ 0.34
SHCBP1-205ENST00000566016 GAPTQ8N292 157 aa17.2■□□□□ 0.34
SHCBP1-205ENST00000566016 ZNF565Q8N9K5 539 aa17.2■□□□□ 0.34
SHCBP1-205ENST00000566016 OR51D1Q8NGF3 324 aa17.2■□□□□ 0.34
SHCBP1-205ENST00000566016 ZNF48Q96MX3 618 aaPredicted RBP17.2■□□□□ 0.34
SHCBP1-205ENST00000566016 URM1Q9BTM9 101 aaKnown RBP17.2■□□□□ 0.34
SHCBP1-205ENST00000566016 LINC00574Q9H8X3 128 aa17.2■□□□□ 0.34
SHCBP1-205ENST00000566016 PEX16Q9Y5Y5 336 aa17.2■□□□□ 0.34
SHCBP1-205ENST00000566016 MEIKINA0A087WXM9 373 aa17.19■□□□□ 0.34
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