RNA–Protein interactions for RNA: ENST00000565511.5

RAB40C-209, Transcript of RAB40C, member RAS oncogene family, humanhuman

TSL 3

Gene RAB40C, Length 783 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB40C-209ENST00000565511 MTNR1BP49286 362 aa18.92■□□□□ 0.62
RAB40C-209ENST00000565511 RAB40BQ12829 278 aa18.92■□□□□ 0.62
RAB40C-209ENST00000565511 RBM39Q14498 530 aaKnown RBP18.92■□□□□ 0.62
RAB40C-209ENST00000565511 ELP2Q6IA86 826 aa18.92■□□□□ 0.62
RAB40C-209ENST00000565511 OR5D14Q8NGL3 314 aa18.92■□□□□ 0.62
RAB40C-209ENST00000565511 PHF21AQ96BD5 680 aa18.92■□□□□ 0.62
RAB40C-209ENST00000565511 RBM14Q96PK6 669 aaKnown RBP18.92■□□□□ 0.62
RAB40C-209ENST00000565511 C9orf16Q9BUW7 83 aa18.92■□□□□ 0.62
RAB40C-209ENST00000565511 S100A14Q9HCY8 104 aa18.92■□□□□ 0.62
RAB40C-209ENST00000565511 INPP5EQ9NRR6 644 aa18.92■□□□□ 0.62
RAB40C-209ENST00000565511 MRPS18AQ9NVS2 196 aaKnown RBP18.92■□□□□ 0.62
RAB40C-209ENST00000565511 SIRT4Q9Y6E7 314 aaPredicted RBP18.92■□□□□ 0.62
RAB40C-209ENST00000565511 TRAV39A0A0B4J263 110 aa18.91■□□□□ 0.62
RAB40C-209ENST00000565511 KBTBD11-OT1A0A1B0GTJ5 212 aa18.91■□□□□ 0.62
RAB40C-209ENST00000565511 OR2F2O95006 317 aa18.91■□□□□ 0.62
RAB40C-209ENST00000565511 DIAPH2-AS1Q14236 149 aa18.91■□□□□ 0.62
RAB40C-209ENST00000565511 PAN3Q58A45 887 aaKnown RBP18.91■□□□□ 0.62
RAB40C-209ENST00000565511 C16orf82Q7Z2V1 217 aa18.91■□□□□ 0.62
RAB40C-209ENST00000565511 PXT1Q8NFP0 134 aa18.91■□□□□ 0.62
RAB40C-209ENST00000565511 OR4F17Q8NGA8 305 aa18.91■□□□□ 0.62
RAB40C-209ENST00000565511 OR4D6Q8NGJ1 314 aa18.91■□□□□ 0.62
RAB40C-209ENST00000565511 CNIH3Q8TBE1 160 aa18.91■□□□□ 0.62
RAB40C-209ENST00000565511 TNFAIP8L1Q8WVP5 186 aa18.91■□□□□ 0.62
RAB40C-209ENST00000565511 ORAI1Q96D31 301 aa18.91■□□□□ 0.62
RAB40C-209ENST00000565511 MRPL48Q96GC5 212 aaKnown RBP18.91■□□□□ 0.62
RAB40C-209ENST00000565511 OR4F4Q96R69 305 aa18.91■□□□□ 0.62
RAB40C-209ENST00000565511 JAM3Q9BX67 310 aa18.91■□□□□ 0.62
RAB40C-209ENST00000565511 CALYQ9NYX4 217 aa18.91■□□□□ 0.62
RAB40C-209ENST00000565511 ALDOBP05062 364 aa18.9■□□□□ 0.62
RAB40C-209ENST00000565511 CCDC159P0C7I6 412 aa18.9■□□□□ 0.62
RAB40C-209ENST00000565511 ETV1P50549 477 aa18.9■□□□□ 0.62
RAB40C-209ENST00000565511 GBX2P52951 348 aaPredicted RBP18.9■□□□□ 0.62
RAB40C-209ENST00000565511 RSBN1Q5VWQ0 802 aaPredicted RBP18.9■□□□□ 0.62
RAB40C-209ENST00000565511 CCDC121Q6ZUS5 278 aa18.9■□□□□ 0.62
RAB40C-209ENST00000565511 SATL1Q86VE3 508 aa18.9■□□□□ 0.62
RAB40C-209ENST00000565511 PQLC1Q8N2U9 271 aa18.9■□□□□ 0.62
RAB40C-209ENST00000565511 AURKAIP1Q9NWT8 199 aaPredicted RBP18.9■□□□□ 0.62
RAB40C-209ENST00000565511 MEIKINA0A087WXM9 373 aa18.89■□□□□ 0.61
RAB40C-209ENST00000565511 TOR1AO14656 332 aa18.89■□□□□ 0.61
RAB40C-209ENST00000565511 XPNPEP2O43895 674 aa18.89■□□□□ 0.61
RAB40C-209ENST00000565511 MPZL2O60487 215 aa18.89■□□□□ 0.61
RAB40C-209ENST00000565511 RAB3AP20336 220 aa18.89■□□□□ 0.61
RAB40C-209ENST00000565511 BRS3P32247 399 aa18.89■□□□□ 0.61
RAB40C-209ENST00000565511 LTC4SQ16873 150 aa18.89■□□□□ 0.61
RAB40C-209ENST00000565511 OR2G6Q5TZ20 316 aa18.89■□□□□ 0.61
RAB40C-209ENST00000565511 OR13C5Q8NGS8 318 aa18.89■□□□□ 0.61
RAB40C-209ENST00000565511 STMN2Q93045 179 aa18.89■□□□□ 0.61
RAB40C-209ENST00000565511 MYDGFQ969H8 173 aa18.89■□□□□ 0.61
RAB40C-209ENST00000565511 Q96MT0 163 aa18.89■□□□□ 0.61
RAB40C-209ENST00000565511 FGF20Q9NP95 211 aaPredicted RBP18.89■□□□□ 0.61
RAB40C-209ENST00000565511 OR6C3Q9NZP0 311 aa18.89■□□□□ 0.61
RAB40C-209ENST00000565511 CDRT1O95170 752 aa18.88■□□□□ 0.61
RAB40C-209ENST00000565511 IGLL1P15814 213 aa18.88■□□□□ 0.61
RAB40C-209ENST00000565511 IL13RA2Q14627 380 aa18.88■□□□□ 0.61
RAB40C-209ENST00000565511 ASCL4Q6XD76 172 aa18.88■□□□□ 0.61
RAB40C-209ENST00000565511 Q8NFD4 153 aa18.88■□□□□ 0.61
RAB40C-209ENST00000565511 RFESDQ8TAC1 157 aa18.88■□□□□ 0.61
RAB40C-209ENST00000565511 MRGPRDQ8TDS7 321 aa18.88■□□□□ 0.61
RAB40C-209ENST00000565511 FAM192AQ9GZU8 254 aa18.88■□□□□ 0.61
RAB40C-209ENST00000565511 RPL36Q9Y3U8 105 aaKnown RBP18.88■□□□□ 0.61
RAB40C-209ENST00000565511 A0A1W2PPI3 338 aa18.87■□□□□ 0.61
RAB40C-209ENST00000565511 CLIC3O95833 236 aa18.87■□□□□ 0.61
RAB40C-209ENST00000565511 LALBAP00709 142 aa18.87■□□□□ 0.61
RAB40C-209ENST00000565511 IL1AP01583 271 aa18.87■□□□□ 0.61
RAB40C-209ENST00000565511 SSTR5P35346 364 aa18.87■□□□□ 0.61
RAB40C-209ENST00000565511 MRPL28Q13084 256 aaKnown RBP18.87■□□□□ 0.61
RAB40C-209ENST00000565511 FAM53AQ6NSI3 398 aaPredicted RBP18.87■□□□□ 0.61
RAB40C-209ENST00000565511 OR9G1Q8NH87 305 aa18.87■□□□□ 0.61
RAB40C-209ENST00000565511 GPER1Q99527 375 aa18.87■□□□□ 0.61
RAB40C-209ENST00000565511 LINC00574Q9H8X3 128 aa18.87■□□□□ 0.61
RAB40C-209ENST00000565511 IDI2-AS1Q9NZ38 188 aa18.87■□□□□ 0.61
RAB40C-209ENST00000565511 MAGEA13PA6NCF6 341 aa18.86■□□□□ 0.61
RAB40C-209ENST00000565511 FAM90A18PA6NE21 464 aa18.86■□□□□ 0.61
RAB40C-209ENST00000565511 FAM90A16PA6NEW6 464 aa18.86■□□□□ 0.61
RAB40C-209ENST00000565511 FAM90A20PA6NIJ5 464 aa18.86■□□□□ 0.61
RAB40C-209ENST00000565511 FAM90A9PA6NNJ1 464 aa18.86■□□□□ 0.61
RAB40C-209ENST00000565511 FAM90A12PA8MX19 464 aa18.86■□□□□ 0.61
RAB40C-209ENST00000565511 FAM90A5PA8MXJ8 464 aa18.86■□□□□ 0.61
RAB40C-209ENST00000565511 J3QR06 171 aa18.86■□□□□ 0.61
RAB40C-209ENST00000565511 SNRNP70P08621 437 aaKnown RBP18.86■□□□□ 0.61
RAB40C-209ENST00000565511 RPSAP08865 295 aaKnown RBP18.86■□□□□ 0.61
RAB40C-209ENST00000565511 FAM90A15PP0C7V4 464 aa18.86■□□□□ 0.61
RAB40C-209ENST00000565511 FAM90A13PP0C7W8 464 aa18.86■□□□□ 0.61
RAB40C-209ENST00000565511 FAM90A14PP0C7W9 464 aa18.86■□□□□ 0.61
RAB40C-209ENST00000565511 FAM90A24PP0C7X0 464 aa18.86■□□□□ 0.61
RAB40C-209ENST00000565511 CEACAM3P40198 252 aa18.86■□□□□ 0.61
RAB40C-209ENST00000565511 PRRX1P54821 245 aa18.86■□□□□ 0.61
RAB40C-209ENST00000565511 FOXB2Q5VYV0 432 aa18.86■□□□□ 0.61
RAB40C-209ENST00000565511 CENPVQ7Z7K6 275 aaPredicted RBP18.86■□□□□ 0.61
RAB40C-209ENST00000565511 OR56B4Q8NH76 319 aa18.86■□□□□ 0.61
RAB40C-209ENST00000565511 CAPSLQ8WWF8 208 aa18.86■□□□□ 0.61
RAB40C-209ENST00000565511 TOMM40LQ969M1 308 aa18.86■□□□□ 0.61
RAB40C-209ENST00000565511 AKR1E2Q96JD6 320 aa18.86■□□□□ 0.61
RAB40C-209ENST00000565511 NECAP2Q9NVZ3 263 aa18.86■□□□□ 0.61
RAB40C-209ENST00000565511 PSG11Q9UQ72 335 aa18.86■□□□□ 0.61
RAB40C-209ENST00000565511 A0A1W2PPE3 182 aa18.85■□□□□ 0.61
RAB40C-209ENST00000565511 TCRBV4S1A1TA0A5B7 111 aa18.85■□□□□ 0.61
RAB40C-209ENST00000565511 NPIPB11E5RHQ5 1161 aa18.85■□□□□ 0.61
RAB40C-209ENST00000565511 PIN1P1O15428 100 aa18.85■□□□□ 0.61
RAB40C-209ENST00000565511 HTR3BO95264 441 aa18.85■□□□□ 0.61
Retrieved 100 of 20,778 RNA–protein pairs in 61.1 ms