RNA–Protein interactions for RNA: ENST00000565023.1

VPS9D1-204, Transcript of VPS9 domain containing 1, humanhuman

APPRIS ALT2 TSL 5

Gene VPS9D1, Length 775 nt, Biotype protein coding, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS9D1-204ENST00000565023 PTGFRP43088 359 aa11.06□□□□□ -0.64
VPS9D1-204ENST00000565023 RAB13P51153 203 aa11.06□□□□□ -0.64
VPS9D1-204ENST00000565023 RPS25P62851 125 aaKnown RBP11.06□□□□□ -0.64
VPS9D1-204ENST00000565023 AESQ08117 197 aa11.06□□□□□ -0.64
VPS9D1-204ENST00000565023 TRAM1Q15629 374 aa11.06□□□□□ -0.64
VPS9D1-204ENST00000565023 FAM189A2Q15884 450 aa11.06□□□□□ -0.64
VPS9D1-204ENST00000565023 SPIN3Q5JUX0 258 aa11.06□□□□□ -0.64
VPS9D1-204ENST00000565023 FAM27D1Q5T7N8 215 aa11.06□□□□□ -0.64
VPS9D1-204ENST00000565023 UBE2UQ5VVX9 321 aa11.06□□□□□ -0.64
VPS9D1-204ENST00000565023 ELP2Q6IA86 826 aa11.06□□□□□ -0.64
VPS9D1-204ENST00000565023 ZNF773Q6PK81 442 aa11.06□□□□□ -0.64
VPS9D1-204ENST00000565023 TMEM91Q6ZNR0 172 aa11.06□□□□□ -0.64
VPS9D1-204ENST00000565023 LYPD6Q86Y78 171 aa11.06□□□□□ -0.64
VPS9D1-204ENST00000565023 CDH26Q8IXH8 852 aa11.06□□□□□ -0.64
VPS9D1-204ENST00000565023 DYNAPQ8N1N2 210 aa11.06□□□□□ -0.64
VPS9D1-204ENST00000565023 Q8NFD4 153 aa11.06□□□□□ -0.64
VPS9D1-204ENST00000565023 OR10K1Q8NGX5 313 aa11.06□□□□□ -0.64
VPS9D1-204ENST00000565023 TNFAIP8L1Q8WVP5 186 aa11.06□□□□□ -0.64
VPS9D1-204ENST00000565023 PHYHIPQ92561 330 aa11.06□□□□□ -0.64
VPS9D1-204ENST00000565023 TMEM203Q969S6 136 aa11.06□□□□□ -0.64
VPS9D1-204ENST00000565023 AJUBAQ96IF1 538 aa11.06□□□□□ -0.64
VPS9D1-204ENST00000565023 SIGLEC9Q9Y336 463 aa11.06□□□□□ -0.64
VPS9D1-204ENST00000565023 MGST3O14880 152 aa11.05□□□□□ -0.64
VPS9D1-204ENST00000565023 DEGS1O15121 323 aa11.05□□□□□ -0.64
VPS9D1-204ENST00000565023 KCNAB3O43448 404 aa11.05□□□□□ -0.64
VPS9D1-204ENST00000565023 MMP23AO75900 390 aa11.05□□□□□ -0.64
VPS9D1-204ENST00000565023 MAS1P04201 325 aa11.05□□□□□ -0.64
VPS9D1-204ENST00000565023 UCHL1P09936 223 aa11.05□□□□□ -0.64
VPS9D1-204ENST00000565023 GABRA5P31644 462 aa11.05□□□□□ -0.64
VPS9D1-204ENST00000565023 OR3A4PP47883 348 aa11.05□□□□□ -0.64
VPS9D1-204ENST00000565023 GLIPR1P48060 266 aa11.05□□□□□ -0.64
VPS9D1-204ENST00000565023 MTNR1BP49286 362 aa11.05□□□□□ -0.64
VPS9D1-204ENST00000565023 P2RX3P56373 397 aa11.05□□□□□ -0.64
VPS9D1-204ENST00000565023 RPL15P61313 204 aaKnown RBP11.05□□□□□ -0.64
VPS9D1-204ENST00000565023 MEF2CQ06413 473 aaPredicted RBP11.05□□□□□ -0.64
VPS9D1-204ENST00000565023 ATXN7L3Q14CW9 347 aaPredicted RBP11.05□□□□□ -0.64
VPS9D1-204ENST00000565023 SSX1Q16384 188 aa11.05□□□□□ -0.64
VPS9D1-204ENST00000565023 SSX2Q16385 188 aa11.05□□□□□ -0.64
VPS9D1-204ENST00000565023 PRAMEF5Q5TYX0 476 aa11.05□□□□□ -0.64
VPS9D1-204ENST00000565023 SLC35E4Q6ICL7 350 aa11.05□□□□□ -0.64
VPS9D1-204ENST00000565023 BAIAP2L2Q6UXY1 529 aa11.05□□□□□ -0.64
VPS9D1-204ENST00000565023 CEACAM19Q7Z692 300 aa11.05□□□□□ -0.64
VPS9D1-204ENST00000565023 NDNFQ8TB73 568 aa11.05□□□□□ -0.64
VPS9D1-204ENST00000565023 FCGR1BQ92637 280 aa11.05□□□□□ -0.64
VPS9D1-204ENST00000565023 MEGF9Q9H1U4 602 aa11.05□□□□□ -0.64
VPS9D1-204ENST00000565023 PPIL3Q9H2H8 161 aaKnown RBP11.05□□□□□ -0.64
VPS9D1-204ENST00000565023 LINC00312Q9Y6C7 94 aa11.05□□□□□ -0.64
VPS9D1-204ENST00000565023 MEGF11A6BM72 1044 aa11.04□□□□□ -0.64
VPS9D1-204ENST00000565023 HTR3BO95264 441 aa11.04□□□□□ -0.64
VPS9D1-204ENST00000565023 JUNBP17275 347 aaPredicted RBP11.04□□□□□ -0.64
VPS9D1-204ENST00000565023 HSD17B12Q53GQ0 312 aa11.04□□□□□ -0.64
VPS9D1-204ENST00000565023 HIST2H2BDQ6DRA6 164 aa11.04□□□□□ -0.64
VPS9D1-204ENST00000565023 TREML4Q6UXN2 200 aa11.04□□□□□ -0.64
VPS9D1-204ENST00000565023 LRRTM1Q86UE6 522 aa11.04□□□□□ -0.64
VPS9D1-204ENST00000565023 NKAIN3Q8N8D7 197 aa11.04□□□□□ -0.64
VPS9D1-204ENST00000565023 ZNF696Q9H7X3 374 aa11.04□□□□□ -0.64
VPS9D1-204ENST00000565023 TCF7L1Q9HCS4 588 aa11.04□□□□□ -0.64
VPS9D1-204ENST00000565023 ABCB10Q9NRK6 738 aa11.04□□□□□ -0.64
VPS9D1-204ENST00000565023 NDUFB11Q9NX14 153 aa11.04□□□□□ -0.64
VPS9D1-204ENST00000565023 IL36GQ9NZH8 169 aa11.04□□□□□ -0.64
VPS9D1-204ENST00000565023 ING4Q9UNL4 249 aa11.04□□□□□ -0.64
VPS9D1-204ENST00000565023 HILPDAQ9Y5L2 63 aa11.04□□□□□ -0.64
VPS9D1-204ENST00000565023 SESN1Q9Y6P5 492 aa11.04□□□□□ -0.64
VPS9D1-204ENST00000565023 TRGV10A0A0A0MS01 117 aa11.03□□□□□ -0.64
VPS9D1-204ENST00000565023 A0A0G2JK05 382 aa11.03□□□□□ -0.64
VPS9D1-204ENST00000565023 SLC33A1O00400 549 aaPredicted RBP11.03□□□□□ -0.64
VPS9D1-204ENST00000565023 CLPXO76031 633 aa11.03□□□□□ -0.64
VPS9D1-204ENST00000565023 CDRT1O95170 752 aa11.03□□□□□ -0.64
VPS9D1-204ENST00000565023 CD37P11049 281 aa11.03□□□□□ -0.64
VPS9D1-204ENST00000565023 SRMP19623 302 aa11.03□□□□□ -0.64
VPS9D1-204ENST00000565023 LMO1P25800 156 aa11.03□□□□□ -0.64
VPS9D1-204ENST00000565023 PROK1P58294 105 aa11.03□□□□□ -0.64
VPS9D1-204ENST00000565023 FABP5Q01469 135 aa11.03□□□□□ -0.64
VPS9D1-204ENST00000565023 RSU1Q15404 277 aa11.03□□□□□ -0.64
VPS9D1-204ENST00000565023 KRBOX4Q5JUW0 171 aa11.03□□□□□ -0.64
VPS9D1-204ENST00000565023 PRR31Q5SQ13 230 aa11.03□□□□□ -0.64
VPS9D1-204ENST00000565023 LDLRAD2Q5SZI1 272 aa11.03□□□□□ -0.64
VPS9D1-204ENST00000565023 ZNF626Q68DY1 528 aa11.03□□□□□ -0.64
VPS9D1-204ENST00000565023 Q6P435 159 aa11.03□□□□□ -0.64
VPS9D1-204ENST00000565023 CD200R1LQ6Q8B3 271 aa11.03□□□□□ -0.64
VPS9D1-204ENST00000565023 TMEM219Q86XT9 240 aa11.03□□□□□ -0.64
VPS9D1-204ENST00000565023 OR51T1Q8NGJ9 327 aa11.03□□□□□ -0.64
VPS9D1-204ENST00000565023 TMEM133Q9H2Q1 129 aa11.03□□□□□ -0.64
VPS9D1-204ENST00000565023 TBL2Q9Y4P3 447 aaKnown RBP11.03□□□□□ -0.64
VPS9D1-204ENST00000565023 IGHV2-26A0A0B4J1V2 119 aa11.02□□□□□ -0.65
VPS9D1-204ENST00000565023 FUOMA2VDF0 154 aa11.02□□□□□ -0.65
VPS9D1-204ENST00000565023 ODF3BA8MYP8 253 aa11.02□□□□□ -0.65
VPS9D1-204ENST00000565023 CCRL2O00421 344 aa11.02□□□□□ -0.65
VPS9D1-204ENST00000565023 CHST1O43916 411 aa11.02□□□□□ -0.65
VPS9D1-204ENST00000565023 ZNF780AO75290 641 aaPredicted RBP11.02□□□□□ -0.65
VPS9D1-204ENST00000565023 ARL6IP5O75915 188 aa11.02□□□□□ -0.65
VPS9D1-204ENST00000565023 TSPAN9O75954 239 aa11.02□□□□□ -0.65
VPS9D1-204ENST00000565023 TNFAIP8O95379 198 aa11.02□□□□□ -0.65
VPS9D1-204ENST00000565023 CDK2P24941 298 aa11.02□□□□□ -0.65
VPS9D1-204ENST00000565023 GDNFP39905 211 aa11.02□□□□□ -0.65
VPS9D1-204ENST00000565023 IL13RA2Q14627 380 aa11.02□□□□□ -0.65
VPS9D1-204ENST00000565023 PIGYQ3MUY2 71 aa11.02□□□□□ -0.65
VPS9D1-204ENST00000565023 PAN3Q58A45 887 aaKnown RBP11.02□□□□□ -0.65
VPS9D1-204ENST00000565023 NHLRC3Q5JS37 347 aa11.02□□□□□ -0.65
VPS9D1-204ENST00000565023 JAGN1Q8N5M9 183 aa11.02□□□□□ -0.65
Retrieved 100 of 20,778 RNA–protein pairs in 43.7 ms