RNA–Protein interactions for RNA: ENST00000564060.5

CMTM3-207, Transcript of CKLF like MARVEL transmembrane domain containing 3, humanhuman

TSL 2 BASIC

Gene CMTM3, Length 824 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CMTM3-207ENST00000564060 TENM1Q9UKZ4 2725 aa16.13■□□□□ 0.17
CMTM3-207ENST00000564060 IGHV2-26A0A0B4J1V2 119 aa16.12■□□□□ 0.17
CMTM3-207ENST00000564060 A0A1W2PPK0 400 aa16.12■□□□□ 0.17
CMTM3-207ENST00000564060 CLPSL1A2RUU4 121 aa16.12■□□□□ 0.17
CMTM3-207ENST00000564060 MEGF11A6BM72 1044 aa16.12■□□□□ 0.17
CMTM3-207ENST00000564060 FAM90A8PA6NJQ4 464 aa16.12■□□□□ 0.17
CMTM3-207ENST00000564060 ZNF729A6NN14 1252 aaPredicted RBP16.12■□□□□ 0.17
CMTM3-207ENST00000564060 GTF2F2P13984 249 aa16.12■□□□□ 0.17
CMTM3-207ENST00000564060 RBM11P57052 281 aaKnown RBP16.12■□□□□ 0.17
CMTM3-207ENST00000564060 PAX5Q02548 391 aa16.12■□□□□ 0.17
CMTM3-207ENST00000564060 PIGYQ3MUY2 71 aa16.12■□□□□ 0.17
CMTM3-207ENST00000564060 MINOS1Q5TGZ0 78 aa16.12■□□□□ 0.17
CMTM3-207ENST00000564060 OLFML2AQ68BL7 652 aa16.12■□□□□ 0.17
CMTM3-207ENST00000564060 LIAT1Q6ZQX7 453 aa16.12■□□□□ 0.17
CMTM3-207ENST00000564060 RTN4RL2Q86UN3 420 aa16.12■□□□□ 0.17
CMTM3-207ENST00000564060 ZNF565Q8N9K5 539 aa16.12■□□□□ 0.17
CMTM3-207ENST00000564060 OR4D6Q8NGJ1 314 aa16.12■□□□□ 0.17
CMTM3-207ENST00000564060 C17orf50Q8WW18 174 aa16.12■□□□□ 0.17
CMTM3-207ENST00000564060 MRPS24Q96EL2 167 aaKnown RBP16.12■□□□□ 0.17
CMTM3-207ENST00000564060 COQ2Q96H96 371 aa16.12■□□□□ 0.17
CMTM3-207ENST00000564060 DUSP21Q9H596 190 aa16.12■□□□□ 0.17
CMTM3-207ENST00000564060 MINOS1-NBL1R4GNA1 71 aa16.12■□□□□ 0.17
CMTM3-207ENST00000564060 TRAV24A0A0B4J272 114 aa16.11■□□□□ 0.17
CMTM3-207ENST00000564060 HSPB6O14558 160 aa16.11■□□□□ 0.17
CMTM3-207ENST00000564060 OR7C1O76099 320 aaPredicted RBP16.11■□□□□ 0.17
CMTM3-207ENST00000564060 MAS1P04201 325 aa16.11■□□□□ 0.17
CMTM3-207ENST00000564060 RELBQ01201 579 aa16.11■□□□□ 0.17
CMTM3-207ENST00000564060 SLC22A6Q4U2R8 563 aa16.11■□□□□ 0.17
CMTM3-207ENST00000564060 AWAT2Q6E213 333 aa16.11■□□□□ 0.17
CMTM3-207ENST00000564060 DTX3Q8N9I9 347 aa16.11■□□□□ 0.17
CMTM3-207ENST00000564060 ZNF596Q8TC21 504 aa16.11■□□□□ 0.17
CMTM3-207ENST00000564060 UFD1Q92890 307 aa16.11■□□□□ 0.17
CMTM3-207ENST00000564060 AJUBAQ96IF1 538 aa16.11■□□□□ 0.17
CMTM3-207ENST00000564060 OR5M11Q96RB7 305 aa16.11■□□□□ 0.17
CMTM3-207ENST00000564060 NKX3-1Q99801 234 aaPredicted RBP16.11■□□□□ 0.17
CMTM3-207ENST00000564060 ABCB10Q9NRK6 738 aa16.11■□□□□ 0.17
CMTM3-207ENST00000564060 RAB26Q9ULW5 256 aa16.11■□□□□ 0.17
CMTM3-207ENST00000564060 MRPS28Q9Y2Q9 187 aaKnown RBP16.11■□□□□ 0.17
CMTM3-207ENST00000564060 LSM2Q9Y333 95 aaKnown RBP16.11■□□□□ 0.17
CMTM3-207ENST00000564060 MAGEA13PA6NCF6 341 aa16.1■□□□□ 0.17
CMTM3-207ENST00000564060 VGLL3A8MV65 326 aa16.1■□□□□ 0.17
CMTM3-207ENST00000564060 ATP6V1G2O95670 118 aa16.1■□□□□ 0.17
CMTM3-207ENST00000564060 CRHBPP24387 322 aa16.1■□□□□ 0.17
CMTM3-207ENST00000564060 CDK2P24941 298 aa16.1■□□□□ 0.17
CMTM3-207ENST00000564060 IRF3Q14653 427 aa16.1■□□□□ 0.17
CMTM3-207ENST00000564060 ACSM3Q53FZ2 586 aa16.1■□□□□ 0.17
CMTM3-207ENST00000564060 PRSS48Q7RTY5 328 aa16.1■□□□□ 0.17
CMTM3-207ENST00000564060 LHFPL4Q7Z7J7 247 aa16.1■□□□□ 0.17
CMTM3-207ENST00000564060 TAF15Q92804 592 aaKnown RBP eCLIP16.1■□□□□ 0.17
CMTM3-207ENST00000564060 MUL1Q969V5 352 aa16.1■□□□□ 0.17
CMTM3-207ENST00000564060 CNBD2Q96M20 576 aa16.1■□□□□ 0.17
CMTM3-207ENST00000564060 UQCC2Q9BRT2 126 aa16.1■□□□□ 0.17
CMTM3-207ENST00000564060 CCDC90BQ9GZT6 254 aa16.1■□□□□ 0.17
CMTM3-207ENST00000564060 SPACA1Q9HBV2 294 aa16.1■□□□□ 0.17
CMTM3-207ENST00000564060 TCF7L1Q9HCS4 588 aa16.1■□□□□ 0.17
CMTM3-207ENST00000564060 ING3Q9NXR8 418 aa16.1■□□□□ 0.17
CMTM3-207ENST00000564060 MEIKINA0A087WXM9 373 aa16.09■□□□□ 0.17
CMTM3-207ENST00000564060 VHLP40337 213 aa16.09■□□□□ 0.17
CMTM3-207ENST00000564060 GLP1RP43220 463 aa16.09■□□□□ 0.17
CMTM3-207ENST00000564060 TRAM1Q15629 374 aa16.09■□□□□ 0.17
CMTM3-207ENST00000564060 SSX2Q16385 188 aa16.09■□□□□ 0.17
CMTM3-207ENST00000564060 RBM48Q5RL73 367 aaKnown RBP16.09■□□□□ 0.17
CMTM3-207ENST00000564060 PRAMEF5Q5TYX0 476 aa16.09■□□□□ 0.17
CMTM3-207ENST00000564060 GLIPR1L1Q6UWM5 242 aa16.09■□□□□ 0.17
CMTM3-207ENST00000564060 SUMF2Q8NBJ7 301 aa16.09■□□□□ 0.17
CMTM3-207ENST00000564060 NDNFQ8TB73 568 aa16.09■□□□□ 0.17
CMTM3-207ENST00000564060 PHYHIPQ92561 330 aa16.09■□□□□ 0.17
CMTM3-207ENST00000564060 CREB3L1Q96BA8 519 aa16.09■□□□□ 0.17
CMTM3-207ENST00000564060 TMED9Q9BVK6 235 aa16.09■□□□□ 0.17
CMTM3-207ENST00000564060 DPCDQ9BVM2 203 aaPredicted RBP16.09■□□□□ 0.17
CMTM3-207ENST00000564060 PPIL3Q9H2H8 161 aaKnown RBP16.09■□□□□ 0.17
CMTM3-207ENST00000564060 ISYNA1Q9NPH2 558 aa16.09■□□□□ 0.17
CMTM3-207ENST00000564060 GHRLQ9UBU3 117 aa16.09■□□□□ 0.17
CMTM3-207ENST00000564060 KIF25Q9UIL4 384 aa16.09■□□□□ 0.17
CMTM3-207ENST00000564060 PITPNC1Q9UKF7 332 aa16.09■□□□□ 0.17
CMTM3-207ENST00000564060 RNF114Q9Y508 228 aa16.09■□□□□ 0.17
CMTM3-207ENST00000564060 KBTBD11-OT1A0A1B0GTJ5 212 aa16.08■□□□□ 0.16
CMTM3-207ENST00000564060 H3BUI4 141 aa16.08■□□□□ 0.16
CMTM3-207ENST00000564060 GEMIN2O14893 280 aaKnown RBP16.08■□□□□ 0.16
CMTM3-207ENST00000564060 PIN1P1O15428 100 aa16.08■□□□□ 0.16
CMTM3-207ENST00000564060 TSPAN9O75954 239 aa16.08■□□□□ 0.16
CMTM3-207ENST00000564060 PSMA1P25786 263 aaKnown RBP16.08■□□□□ 0.16
CMTM3-207ENST00000564060 HTR1DP28221 377 aa16.08■□□□□ 0.16
CMTM3-207ENST00000564060 CD34P28906 385 aa16.08■□□□□ 0.16
CMTM3-207ENST00000564060 ARHGDIBP52566 201 aa16.08■□□□□ 0.16
CMTM3-207ENST00000564060 FAM189A2Q15884 450 aa16.08■□□□□ 0.16
CMTM3-207ENST00000564060 UNQ9370/PRO34162Q6UXP9 181 aa16.08■□□□□ 0.16
CMTM3-207ENST00000564060 Q6ZSV7 163 aa16.08■□□□□ 0.16
CMTM3-207ENST00000564060 ABHD12Q8N2K0 398 aa16.08■□□□□ 0.16
CMTM3-207ENST00000564060 LINC01006Q8NI28 216 aa16.08■□□□□ 0.16
CMTM3-207ENST00000564060 WFDC12Q8WWY7 111 aa16.08■□□□□ 0.16
CMTM3-207ENST00000564060 SGCDQ92629 289 aa16.08■□□□□ 0.16
CMTM3-207ENST00000564060 C16orf95Q9H693 158 aa16.08■□□□□ 0.16
CMTM3-207ENST00000564060 MMP23AO75900 390 aa16.07■□□□□ 0.16
CMTM3-207ENST00000564060 HSMCR30P0CW71 290 aa16.07■□□□□ 0.16
CMTM3-207ENST00000564060 DYNLT3P51808 116 aa16.07■□□□□ 0.16
CMTM3-207ENST00000564060 MLLT11Q13015 90 aaPredicted RBP16.07■□□□□ 0.16
CMTM3-207ENST00000564060 RBM39Q14498 530 aaKnown RBP16.07■□□□□ 0.16
CMTM3-207ENST00000564060 LY6EQ16553 131 aa16.07■□□□□ 0.16
CMTM3-207ENST00000564060 ATAD3CQ5T2N8 411 aa16.07■□□□□ 0.16
Retrieved 100 of 20,778 RNA–protein pairs in 49.5 ms