RNA–Protein interactions for RNA: ENST00000563739.5

SF3B3-204, Transcript of splicing factor 3b subunit 3, humanhuman

TSL 2

Gene SF3B3, Length 1,105 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3B3-204ENST00000563739 CDC42P60953 191 aa8.05□□□□□ -1.12
SF3B3-204ENST00000563739 RPS7P62081 194 aaKnown RBP8.05□□□□□ -1.12
SF3B3-204ENST00000563739 EFNB1P98172 346 aa8.05□□□□□ -1.12
SF3B3-204ENST00000563739 APOFQ13790 326 aa8.05□□□□□ -1.12
SF3B3-204ENST00000563739 EBI3Q14213 229 aa8.05□□□□□ -1.12
SF3B3-204ENST00000563739 AADACL4Q5VUY2 407 aa8.05□□□□□ -1.12
SF3B3-204ENST00000563739 KCTD18Q6PI47 426 aaPredicted RBP8.05□□□□□ -1.12
SF3B3-204ENST00000563739 DEGS2Q6QHC5 323 aa8.05□□□□□ -1.12
SF3B3-204ENST00000563739 SLC35E3Q7Z769 313 aa8.05□□□□□ -1.12
SF3B3-204ENST00000563739 ELMOD2Q8IZ81 293 aa8.05□□□□□ -1.12
SF3B3-204ENST00000563739 COMMD1Q8N668 190 aa8.05□□□□□ -1.12
SF3B3-204ENST00000563739 DRAM1Q8N682 238 aa8.05□□□□□ -1.12
SF3B3-204ENST00000563739 Q8N9W7 124 aa8.05□□□□□ -1.12
SF3B3-204ENST00000563739 ZNF596Q8TC21 504 aa8.05□□□□□ -1.12
SF3B3-204ENST00000563739 CAPSLQ8WWF8 208 aa8.05□□□□□ -1.12
SF3B3-204ENST00000563739 LEAP2Q969E1 77 aa8.05□□□□□ -1.12
SF3B3-204ENST00000563739 KIRREL1Q96J84 757 aa8.05□□□□□ -1.12
SF3B3-204ENST00000563739 HRASLS5Q96KN8 279 aa8.05□□□□□ -1.12
SF3B3-204ENST00000563739 RDH12Q96NR8 316 aa8.05□□□□□ -1.12
SF3B3-204ENST00000563739 IL4I1Q96RQ9 567 aa8.05□□□□□ -1.12
SF3B3-204ENST00000563739 HSPB9Q9BQS6 159 aa8.05□□□□□ -1.12
SF3B3-204ENST00000563739 PPIL3Q9H2H8 161 aaKnown RBP8.05□□□□□ -1.12
SF3B3-204ENST00000563739 GNB4Q9HAV0 340 aa8.05□□□□□ -1.12
SF3B3-204ENST00000563739 IMPAD1Q9NX62 359 aa8.05□□□□□ -1.12
SF3B3-204ENST00000563739 SMPD3Q9NY59 655 aaPredicted RBP8.05□□□□□ -1.12
SF3B3-204ENST00000563739 SLC7A11Q9UPY5 501 aa8.05□□□□□ -1.12
SF3B3-204ENST00000563739 DYNC1H1Q14204 4646 aaKnown RBP8.04□□□□□ -1.12
SF3B3-204ENST00000563739 IGKV1-9A0A0C4DH69 117 aa8.04□□□□□ -1.12
SF3B3-204ENST00000563739 TRBV2A0A0J9YWF9 115 aa8.04□□□□□ -1.12
SF3B3-204ENST00000563739 FAM230AA0A1W2PPH8 454 aa8.04□□□□□ -1.12
SF3B3-204ENST00000563739 A6NHS1 94 aa8.04□□□□□ -1.12
SF3B3-204ENST00000563739 OOSP1A8MZH6 123 aa8.04□□□□□ -1.12
SF3B3-204ENST00000563739 I3L521 148 aa8.04□□□□□ -1.12
SF3B3-204ENST00000563739 SIRPB1O00241 398 aa8.04□□□□□ -1.12
SF3B3-204ENST00000563739 SPNP16150 400 aa8.04□□□□□ -1.12
SF3B3-204ENST00000563739 BCL3P20749 454 aa8.04□□□□□ -1.12
SF3B3-204ENST00000563739 GABRR1P24046 479 aa8.04□□□□□ -1.12
SF3B3-204ENST00000563739 VEGFCP49767 419 aa8.04□□□□□ -1.12
SF3B3-204ENST00000563739 NXNL2Q5VZ03 156 aa8.04□□□□□ -1.12
SF3B3-204ENST00000563739 SLC25A26Q70HW3 274 aa8.04□□□□□ -1.12
SF3B3-204ENST00000563739 SSX6Q7RTT6 188 aa8.04□□□□□ -1.12
SF3B3-204ENST00000563739 BCDIN3DQ7Z5W3 292 aaKnown RBP8.04□□□□□ -1.12
SF3B3-204ENST00000563739 COMMD2Q86X83 199 aa8.04□□□□□ -1.12
SF3B3-204ENST00000563739 GID4Q8IVV7 300 aa8.04□□□□□ -1.12
SF3B3-204ENST00000563739 ZNF679Q8IYX0 411 aa8.04□□□□□ -1.12
SF3B3-204ENST00000563739 OR8J1Q8NGP2 316 aa8.04□□□□□ -1.12
SF3B3-204ENST00000563739 C4orf3Q8WVX3 66 aa8.04□□□□□ -1.12
SF3B3-204ENST00000563739 EMG1Q92979 244 aaKnown RBP8.04□□□□□ -1.12
SF3B3-204ENST00000563739 CNBD2Q96M20 576 aa8.04□□□□□ -1.12
SF3B3-204ENST00000563739 APOL4Q9BPW4 351 aa8.04□□□□□ -1.12
SF3B3-204ENST00000563739 YIPF3Q9GZM5 350 aa8.04□□□□□ -1.12
SF3B3-204ENST00000563739 PALMDQ9NP74 551 aa8.04□□□□□ -1.12
SF3B3-204ENST00000563739 PLSCR3Q9NRY6 295 aa8.04□□□□□ -1.12
SF3B3-204ENST00000563739 TAS2R3Q9NYW6 316 aa8.04□□□□□ -1.12
SF3B3-204ENST00000563739 MRM2Q9UI43 246 aaKnown RBP8.04□□□□□ -1.12
SF3B3-204ENST00000563739 ODAMA1E959 279 aa8.03□□□□□ -1.12
SF3B3-204ENST00000563739 DHRS7CA6NNS2 312 aa8.03□□□□□ -1.12
SF3B3-204ENST00000563739 H3BSH0 61 aa8.03□□□□□ -1.12
SF3B3-204ENST00000563739 OR2H2O95918 312 aa8.03□□□□□ -1.12
SF3B3-204ENST00000563739 IGKV1D-33P01593 117 aa8.03□□□□□ -1.12
SF3B3-204ENST00000563739 IGKV1-33P01594 117 aa8.03□□□□□ -1.12
SF3B3-204ENST00000563739 IGHV3-7P01780 117 aa8.03□□□□□ -1.12
SF3B3-204ENST00000563739 IGHG4P01861 327 aa8.03□□□□□ -1.12
SF3B3-204ENST00000563739 TMEM11P17152 192 aa8.03□□□□□ -1.12
SF3B3-204ENST00000563739 PSMB8P28062 276 aa8.03□□□□□ -1.12
SF3B3-204ENST00000563739 SNU13P55769 128 aaKnown RBP8.03□□□□□ -1.12
SF3B3-204ENST00000563739 GNB1P62873 340 aa8.03□□□□□ -1.12
SF3B3-204ENST00000563739 AESQ08117 197 aa8.03□□□□□ -1.12
SF3B3-204ENST00000563739 FOXE3Q13461 319 aa8.03□□□□□ -1.12
SF3B3-204ENST00000563739 HNF4GQ14541 408 aa8.03□□□□□ -1.12
SF3B3-204ENST00000563739 Q6P435 159 aa8.03□□□□□ -1.12
SF3B3-204ENST00000563739 MEPCEQ7L2J0 689 aaKnown RBP8.03□□□□□ -1.12
SF3B3-204ENST00000563739 Q8N1Y9 231 aa8.03□□□□□ -1.12
SF3B3-204ENST00000563739 TRUB1Q8WWH5 349 aaKnown RBP8.03□□□□□ -1.12
SF3B3-204ENST00000563739 TOMM40LQ969M1 308 aa8.03□□□□□ -1.12
SF3B3-204ENST00000563739 CNN2Q99439 309 aaKnown RBP8.03□□□□□ -1.12
SF3B3-204ENST00000563739 ANKRD60Q9BZ19 345 aa8.03□□□□□ -1.12
SF3B3-204ENST00000563739 ABCG5Q9H222 651 aa8.03□□□□□ -1.12
SF3B3-204ENST00000563739 ISYNA1Q9NPH2 558 aa8.03□□□□□ -1.12
SF3B3-204ENST00000563739 C19orf73Q9NVV2 129 aa8.03□□□□□ -1.12
SF3B3-204ENST00000563739 LAMP5Q9UJQ1 280 aa8.03□□□□□ -1.12
SF3B3-204ENST00000563739 GMPPBQ9Y5P6 360 aa8.03□□□□□ -1.12
SF3B3-204ENST00000563739 R4GMQ9 66 aa8.03□□□□□ -1.12
SF3B3-204ENST00000563739 TNCP24821 2201 aa8.03□□□□□ -1.12
SF3B3-204ENST00000563739 FAT2Q9NYQ8 4349 aa8.02□□□□□ -1.13
SF3B3-204ENST00000563739 LOC100130705A0A1B0GUX0 176 aa8.02□□□□□ -1.13
SF3B3-204ENST00000563739 DPPA5A6NC42 116 aa8.02□□□□□ -1.13
SF3B3-204ENST00000563739 SLC16A6O15403 523 aa8.02□□□□□ -1.13
SF3B3-204ENST00000563739 LY86O95711 162 aa8.02□□□□□ -1.13
SF3B3-204ENST00000563739 MYF6P23409 242 aa8.02□□□□□ -1.13
SF3B3-204ENST00000563739 HTR1FP30939 366 aa8.02□□□□□ -1.13
SF3B3-204ENST00000563739 CAPGP40121 348 aa8.02□□□□□ -1.13
SF3B3-204ENST00000563739 SNRPGP62308 76 aaKnown RBP8.02□□□□□ -1.13
SF3B3-204ENST00000563739 ADARB1P78563 741 aaKnown RBP8.02□□□□□ -1.13
SF3B3-204ENST00000563739 GPR50Q13585 617 aa8.02□□□□□ -1.13
SF3B3-204ENST00000563739 RBM39Q14498 530 aaKnown RBP8.02□□□□□ -1.13
SF3B3-204ENST00000563739 PNLIPRP3Q17RR3 467 aa8.02□□□□□ -1.13
SF3B3-204ENST00000563739 ZNF829Q3KNS6 432 aaPredicted RBP8.02□□□□□ -1.13
SF3B3-204ENST00000563739 OR52W1Q6IF63 320 aa8.02□□□□□ -1.13
SF3B3-204ENST00000563739 TEX38Q6PEX7 206 aa8.02□□□□□ -1.13
Retrieved 100 of 20,778 RNA–protein pairs in 194.1 ms