RNA–Protein interactions for RNA: ENST00000563009.5

EDC3-206, Transcript of enhancer of mRNA decapping 3, humanhuman

TSL 3

Gene EDC3, Length 967 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EDC3-206ENST00000563009 MXD1Q05195 221 aa12.52□□□□□ -0.41
EDC3-206ENST00000563009 ATXN7L3Q14CW9 347 aaPredicted RBP12.52□□□□□ -0.41
EDC3-206ENST00000563009 KLF17Q5JT82 389 aaPredicted RBP12.52□□□□□ -0.41
EDC3-206ENST00000563009 SFXN4Q6P4A7 337 aa12.52□□□□□ -0.41
EDC3-206ENST00000563009 METAP1DQ6UB28 335 aaPredicted RBP12.52□□□□□ -0.41
EDC3-206ENST00000563009 GPR141Q7Z602 305 aa12.52□□□□□ -0.41
EDC3-206ENST00000563009 BPIFB2Q8N4F0 458 aa12.52□□□□□ -0.41
EDC3-206ENST00000563009 FAM89BQ8N5H3 189 aa12.52□□□□□ -0.41
EDC3-206ENST00000563009 C11orf42Q8N5U0 333 aa12.52□□□□□ -0.41
EDC3-206ENST00000563009 TPRX1Q8N7U7 411 aa12.52□□□□□ -0.41
EDC3-206ENST00000563009 LPAR5Q9H1C0 372 aa12.52□□□□□ -0.41
EDC3-206ENST00000563009 LIN7BQ9HAP6 207 aa12.52□□□□□ -0.41
EDC3-206ENST00000563009 LINC00312Q9Y6C7 94 aa12.52□□□□□ -0.41
EDC3-206ENST00000563009 NIPBLQ6KC79 2804 aaeCLIP12.52□□□□□ -0.41
EDC3-206ENST00000563009 TMEM272A0A1B0GTI8 110 aa12.51□□□□□ -0.41
EDC3-206ENST00000563009 ODAMA1E959 279 aa12.51□□□□□ -0.41
EDC3-206ENST00000563009 GABARAPO95166 117 aa12.51□□□□□ -0.41
EDC3-206ENST00000563009 GLAP06280 429 aa12.51□□□□□ -0.41
EDC3-206ENST00000563009 CLEC2LP0C7M8 214 aa12.51□□□□□ -0.41
EDC3-206ENST00000563009 SLC2A2P11168 524 aaPredicted RBP12.51□□□□□ -0.41
EDC3-206ENST00000563009 CCL3L1P16619 93 aa12.51□□□□□ -0.41
EDC3-206ENST00000563009 SRD5A1P18405 259 aa12.51□□□□□ -0.41
EDC3-206ENST00000563009 FUT3P21217 361 aa12.51□□□□□ -0.41
EDC3-206ENST00000563009 SRP14P37108 136 aaKnown RBP12.51□□□□□ -0.41
EDC3-206ENST00000563009 RPL5P46777 297 aaKnown RBP12.51□□□□□ -0.41
EDC3-206ENST00000563009 GLIPR1P48060 266 aa12.51□□□□□ -0.41
EDC3-206ENST00000563009 LSM3P62310 102 aaKnown RBP12.51□□□□□ -0.41
EDC3-206ENST00000563009 KRBOX4Q5JUW0 171 aa12.51□□□□□ -0.41
EDC3-206ENST00000563009 ATAD3CQ5T2N8 411 aa12.51□□□□□ -0.41
EDC3-206ENST00000563009 RSBN1Q5VWQ0 802 aaPredicted RBP12.51□□□□□ -0.41
EDC3-206ENST00000563009 RAB12Q6IQ22 244 aa12.51□□□□□ -0.41
EDC3-206ENST00000563009 PLPPR1Q8TBJ4 325 aa12.51□□□□□ -0.41
EDC3-206ENST00000563009 CORO2AQ92828 525 aa12.51□□□□□ -0.41
EDC3-206ENST00000563009 NICN1Q9BSH3 213 aa12.51□□□□□ -0.41
EDC3-206ENST00000563009 PCGF1Q9BSM1 259 aa12.51□□□□□ -0.41
EDC3-206ENST00000563009 URM1Q9BTM9 101 aaKnown RBP12.51□□□□□ -0.41
EDC3-206ENST00000563009 BARHL1Q9BZE3 327 aa12.51□□□□□ -0.41
EDC3-206ENST00000563009 METTL8Q9H825 291 aaKnown RBP12.51□□□□□ -0.41
EDC3-206ENST00000563009 UBE2J1Q9Y385 318 aaPredicted RBP12.51□□□□□ -0.41
EDC3-206ENST00000563009 NAV3Q8IVL0 2385 aa12.51□□□□□ -0.41
EDC3-206ENST00000563009 A0A0A6YYD4 124 aa12.5□□□□□ -0.41
EDC3-206ENST00000563009 A0A0B4J203 849 aa12.5□□□□□ -0.41
EDC3-206ENST00000563009 C17orf98A8MV24 154 aa12.5□□□□□ -0.41
EDC3-206ENST00000563009 TMEM127O75204 238 aa12.5□□□□□ -0.41
EDC3-206ENST00000563009 PDCD6O75340 191 aa12.5□□□□□ -0.41
EDC3-206ENST00000563009 IL1AP01583 271 aa12.5□□□□□ -0.41
EDC3-206ENST00000563009 RBP4P02753 201 aa12.5□□□□□ -0.41
EDC3-206ENST00000563009 ZNF728P0DKX0 622 aa12.5□□□□□ -0.41
EDC3-206ENST00000563009 HOXB4P17483 251 aaPredicted RBP12.5□□□□□ -0.41
EDC3-206ENST00000563009 RAB6AP20340 208 aa12.5□□□□□ -0.41
EDC3-206ENST00000563009 PRTN3P24158 256 aa12.5□□□□□ -0.41
EDC3-206ENST00000563009 CHATP28329 748 aa12.5□□□□□ -0.41
EDC3-206ENST00000563009 NCS1P62166 190 aa12.5□□□□□ -0.41
EDC3-206ENST00000563009 BLMHQ13867 455 aa12.5□□□□□ -0.41
EDC3-206ENST00000563009 RBM39Q14498 530 aaKnown RBP12.5□□□□□ -0.41
EDC3-206ENST00000563009 CTF1Q16619 201 aa12.5□□□□□ -0.41
EDC3-206ENST00000563009 GPR107Q5VW38 600 aa12.5□□□□□ -0.41
EDC3-206ENST00000563009 SLC35E4Q6ICL7 350 aa12.5□□□□□ -0.41
EDC3-206ENST00000563009 BRICD5Q6PL45 260 aa12.5□□□□□ -0.41
EDC3-206ENST00000563009 VMO1Q7Z5L0 202 aa12.5□□□□□ -0.41
EDC3-206ENST00000563009 TNFRSF14Q92956 283 aa12.5□□□□□ -0.41
EDC3-206ENST00000563009 PTX4Q96A99 478 aa12.5□□□□□ -0.41
EDC3-206ENST00000563009 ZNF714Q96N38 554 aa12.5□□□□□ -0.41
EDC3-206ENST00000563009 NAA50Q9GZZ1 169 aaKnown RBP12.5□□□□□ -0.41
EDC3-206ENST00000563009 DAPK2Q9UIK4 370 aa12.5□□□□□ -0.41
EDC3-206ENST00000563009 SCOCQ9UIL1 159 aa12.5□□□□□ -0.41
EDC3-206ENST00000563009 NUP50Q9UKX7 468 aa12.5□□□□□ -0.41
EDC3-206ENST00000563009 RAB22AQ9UL26 194 aa12.5□□□□□ -0.41
EDC3-206ENST00000563009 PEX16Q9Y5Y5 336 aa12.5□□□□□ -0.41
EDC3-206ENST00000563009 MXRA5Q9NR99 2828 aa12.5□□□□□ -0.41
EDC3-206ENST00000563009 NF1P21359 2839 aa12.49□□□□□ -0.41
EDC3-206ENST00000563009 TRGV10A0A0A0MS01 117 aa12.49□□□□□ -0.41
EDC3-206ENST00000563009 TRAV40A0A0B4J280 105 aa12.49□□□□□ -0.41
EDC3-206ENST00000563009 FOXI3A8MTJ6 420 aaPredicted RBP12.49□□□□□ -0.41
EDC3-206ENST00000563009 MCRIP1C9JLW8 97 aa12.49□□□□□ -0.41
EDC3-206ENST00000563009 IGHV4-38-2P0DP08 117 aa12.49□□□□□ -0.41
EDC3-206ENST00000563009 RPS19P39019 145 aaKnown RBP12.49□□□□□ -0.41
EDC3-206ENST00000563009 SCAND1P57086 179 aa12.49□□□□□ -0.41
EDC3-206ENST00000563009 VBP1P61758 197 aa12.49□□□□□ -0.41
EDC3-206ENST00000563009 PLA2G7Q13093 441 aa12.49□□□□□ -0.41
EDC3-206ENST00000563009 ZNF497Q6ZNH5 498 aa12.49□□□□□ -0.41
EDC3-206ENST00000563009 CROCCP3Q8IVE0 287 aa12.49□□□□□ -0.41
EDC3-206ENST00000563009 GAPTQ8N292 157 aa12.49□□□□□ -0.41
EDC3-206ENST00000563009 SIRT7Q9NRC8 400 aa12.49□□□□□ -0.41
EDC3-206ENST00000563009 TAS2R3Q9NYW6 316 aa12.49□□□□□ -0.41
EDC3-206ENST00000563009 OR6C3Q9NZP0 311 aa12.49□□□□□ -0.41
EDC3-206ENST00000563009 KIF25Q9UIL4 384 aa12.49□□□□□ -0.41
EDC3-206ENST00000563009 CUBNO60494 3623 aa12.48□□□□□ -0.41
EDC3-206ENST00000563009 SETD2Q9BYW2 2564 aaPredicted RBP12.48□□□□□ -0.41
EDC3-206ENST00000563009 MEIKINA0A087WXM9 373 aa12.48□□□□□ -0.41
EDC3-206ENST00000563009 CENPVL3A0A0U1RRI6 287 aa12.48□□□□□ -0.41
EDC3-206ENST00000563009 hCG_1809904A0A1W2PP81 198 aa12.48□□□□□ -0.41
EDC3-206ENST00000563009 A0A1W2PPE2 198 aa12.48□□□□□ -0.41
EDC3-206ENST00000563009 A0A1W2PR64 198 aa12.48□□□□□ -0.41
EDC3-206ENST00000563009 A0A1W2PRV1 198 aa12.48□□□□□ -0.41
EDC3-206ENST00000563009 TMEM30CPA0ZSE6 113 aa12.48□□□□□ -0.41
EDC3-206ENST00000563009 MEX3AA1L020 520 aaKnown RBP12.48□□□□□ -0.41
EDC3-206ENST00000563009 CA11O75493 328 aa12.48□□□□□ -0.41
EDC3-206ENST00000563009 CGB3P0DN86 165 aa12.48□□□□□ -0.41
EDC3-206ENST00000563009 CGB7P0DN87 165 aa12.48□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 38.6 ms