RNA–Protein interactions for RNA: ENST00000562534.5

USB1-206, Transcript of U6 snRNA biogenesis phosphodiesterase 1, humanhuman

TSL 4

Gene USB1, Length 562 nt, Biotype processed transcript, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USB1-206ENST00000562534 FAM89BQ8N5H3 189 aa13.48□□□□□ -0.25
USB1-206ENST00000562534 ZNF565Q8N9K5 539 aa13.48□□□□□ -0.25
USB1-206ENST00000562534 CORO2AQ92828 525 aa13.48□□□□□ -0.25
USB1-206ENST00000562534 UPRTQ96BW1 309 aa13.48□□□□□ -0.25
USB1-206ENST00000562534 NEDD4LQ96PU5 975 aa13.48□□□□□ -0.25
USB1-206ENST00000562534 RCC2Q9P258 522 aaKnown RBP13.48□□□□□ -0.25
USB1-206ENST00000562534 ONECUT1Q9UBC0 465 aa13.48□□□□□ -0.25
USB1-206ENST00000562534 SMIM30A4D0T7 59 aa13.47□□□□□ -0.25
USB1-206ENST00000562534 METTL21EPA6NDL7 271 aa13.47□□□□□ -0.25
USB1-206ENST00000562534 CA11O75493 328 aa13.47□□□□□ -0.25
USB1-206ENST00000562534 GABARAPO95166 117 aa13.47□□□□□ -0.25
USB1-206ENST00000562534 SLC2A2P11168 524 aaPredicted RBP13.47□□□□□ -0.25
USB1-206ENST00000562534 RAB6AP20340 208 aa13.47□□□□□ -0.25
USB1-206ENST00000562534 SRP14P37108 136 aaKnown RBP13.47□□□□□ -0.25
USB1-206ENST00000562534 GLIPR1P48060 266 aa13.47□□□□□ -0.25
USB1-206ENST00000562534 SCAND1P57086 179 aa13.47□□□□□ -0.25
USB1-206ENST00000562534 VBP1P61758 197 aa13.47□□□□□ -0.25
USB1-206ENST00000562534 SLC35E4Q6ICL7 350 aa13.47□□□□□ -0.25
USB1-206ENST00000562534 SLC16A12Q6ZSM3 486 aa13.47□□□□□ -0.25
USB1-206ENST00000562534 SIRPDQ9H106 197 aa13.47□□□□□ -0.25
USB1-206ENST00000562534 LPAR5Q9H1C0 372 aa13.47□□□□□ -0.25
USB1-206ENST00000562534 METTL8Q9H825 291 aaKnown RBP13.47□□□□□ -0.25
USB1-206ENST00000562534 OR6C3Q9NZP0 311 aa13.47□□□□□ -0.25
USB1-206ENST00000562534 UBE2J1Q9Y385 318 aaPredicted RBP13.47□□□□□ -0.25
USB1-206ENST00000562534 LINC00312Q9Y6C7 94 aa13.47□□□□□ -0.25
USB1-206ENST00000562534 WNK2Q9Y3S1 2297 aa13.46□□□□□ -0.25
USB1-206ENST00000562534 TRGV10A0A0A0MS01 117 aa13.46□□□□□ -0.25
USB1-206ENST00000562534 TMEM272A0A1B0GTI8 110 aa13.46□□□□□ -0.25
USB1-206ENST00000562534 HSPB6O14558 160 aa13.46□□□□□ -0.25
USB1-206ENST00000562534 PDCD6O75340 191 aa13.46□□□□□ -0.25
USB1-206ENST00000562534 ZNF728P0DKX0 622 aa13.46□□□□□ -0.25
USB1-206ENST00000562534 MMP9P14780 707 aa13.46□□□□□ -0.25
USB1-206ENST00000562534 BLVRBP30043 206 aaPredicted RBP13.46□□□□□ -0.25
USB1-206ENST00000562534 TMBIM6P55061 237 aa13.46□□□□□ -0.25
USB1-206ENST00000562534 BPIFB3P59826 476 aa13.46□□□□□ -0.25
USB1-206ENST00000562534 NCS1P62166 190 aa13.46□□□□□ -0.25
USB1-206ENST00000562534 SCGB2A2Q13296 93 aa13.46□□□□□ -0.25
USB1-206ENST00000562534 ATXN7L3Q14CW9 347 aaPredicted RBP13.46□□□□□ -0.25
USB1-206ENST00000562534 CTF1Q16619 201 aa13.46□□□□□ -0.25
USB1-206ENST00000562534 IDNKQ5T6J7 187 aa13.46□□□□□ -0.25
USB1-206ENST00000562534 SIGIRRQ6IA17 410 aa13.46□□□□□ -0.25
USB1-206ENST00000562534 BRICD5Q6PL45 260 aa13.46□□□□□ -0.25
USB1-206ENST00000562534 TPRX1Q8N7U7 411 aa13.46□□□□□ -0.25
USB1-206ENST00000562534 OR56B1Q8NGI3 324 aa13.46□□□□□ -0.25
USB1-206ENST00000562534 NEK7Q8TDX7 302 aa13.46□□□□□ -0.25
USB1-206ENST00000562534 PCGF1Q9BSM1 259 aa13.46□□□□□ -0.25
USB1-206ENST00000562534 PLEKHJ1Q9NW61 149 aa13.46□□□□□ -0.25
USB1-206ENST00000562534 TAS2R3Q9NYW6 316 aa13.46□□□□□ -0.25
USB1-206ENST00000562534 ZNF581Q9P0T4 197 aa13.46□□□□□ -0.25
USB1-206ENST00000562534 TLN2Q9Y4G6 2542 aa13.46□□□□□ -0.26
USB1-206ENST00000562534 MEIKINA0A087WXM9 373 aa13.45□□□□□ -0.26
USB1-206ENST00000562534 ODAMA1E959 279 aa13.45□□□□□ -0.26
USB1-206ENST00000562534 RBP4P02753 201 aa13.45□□□□□ -0.26
USB1-206ENST00000562534 SRD5A1P18405 259 aa13.45□□□□□ -0.26
USB1-206ENST00000562534 GZMHP20718 246 aa13.45□□□□□ -0.26
USB1-206ENST00000562534 PRTN3P24158 256 aa13.45□□□□□ -0.26
USB1-206ENST00000562534 TGFBR1P36897 503 aa13.45□□□□□ -0.26
USB1-206ENST00000562534 SERPINB10P48595 397 aa13.45□□□□□ -0.26
USB1-206ENST00000562534 METAP1DQ6UB28 335 aaPredicted RBP13.45□□□□□ -0.26
USB1-206ENST00000562534 USP43Q70EL4 1123 aa13.45□□□□□ -0.26
USB1-206ENST00000562534 CLVS1Q8IUQ0 354 aaPredicted RBP13.45□□□□□ -0.26
USB1-206ENST00000562534 Q8N7P7 452 aa13.45□□□□□ -0.26
USB1-206ENST00000562534 RAB2BQ8WUD1 216 aa13.45□□□□□ -0.26
USB1-206ENST00000562534 SLC25A46Q96AG3 418 aa13.45□□□□□ -0.26
USB1-206ENST00000562534 COQ2Q96H96 371 aa13.45□□□□□ -0.26
USB1-206ENST00000562534 ZNF714Q96N38 554 aa13.45□□□□□ -0.26
USB1-206ENST00000562534 BCL7BQ9BQE9 202 aa13.45□□□□□ -0.26
USB1-206ENST00000562534 NAA50Q9GZZ1 169 aaKnown RBP13.45□□□□□ -0.26
USB1-206ENST00000562534 KCNK15Q9H427 330 aa13.45□□□□□ -0.26
USB1-206ENST00000562534 UNKLQ9H9P5 680 aaKnown RBP13.45□□□□□ -0.26
USB1-206ENST00000562534 ING3Q9NXR8 418 aa13.45□□□□□ -0.26
USB1-206ENST00000562534 ABRACLQ9P1F3 81 aa13.45□□□□□ -0.26
USB1-206ENST00000562534 HSF4Q9ULV5 492 aa13.45□□□□□ -0.26
USB1-206ENST00000562534 TMEM30CPA0ZSE6 113 aa13.44□□□□□ -0.26
USB1-206ENST00000562534 C17orf98A8MV24 154 aa13.44□□□□□ -0.26
USB1-206ENST00000562534 MT-ND4P03905 459 aa13.44□□□□□ -0.26
USB1-206ENST00000562534 CHATP28329 748 aa13.44□□□□□ -0.26
USB1-206ENST00000562534 VEGFCP49767 419 aa13.44□□□□□ -0.26
USB1-206ENST00000562534 ZNF273Q14593 569 aa13.44□□□□□ -0.26
USB1-206ENST00000562534 RSBN1Q5VWQ0 802 aaPredicted RBP13.44□□□□□ -0.26
USB1-206ENST00000562534 Q6ZTK2 550 aa13.44□□□□□ -0.26
USB1-206ENST00000562534 IL17RELQ6ZVW7 336 aa13.44□□□□□ -0.26
USB1-206ENST00000562534 VMO1Q7Z5L0 202 aa13.44□□□□□ -0.26
USB1-206ENST00000562534 TRAPPC6BQ86SZ2 158 aa13.44□□□□□ -0.26
USB1-206ENST00000562534 C11orf42Q8N5U0 333 aa13.44□□□□□ -0.26
USB1-206ENST00000562534 PLPPR1Q8TBJ4 325 aa13.44□□□□□ -0.26
USB1-206ENST00000562534 TBX15Q96SF7 602 aa13.44□□□□□ -0.26
USB1-206ENST00000562534 NICN1Q9BSH3 213 aa13.44□□□□□ -0.26
USB1-206ENST00000562534 GAL3ST2Q9H3Q3 398 aa13.44□□□□□ -0.26
USB1-206ENST00000562534 HEXA-AS1Q9H8Q6 139 aa13.44□□□□□ -0.26
USB1-206ENST00000562534 ETAA1Q9NY74 926 aa13.44□□□□□ -0.26
USB1-206ENST00000562534 KIF25Q9UIL4 384 aa13.44□□□□□ -0.26
USB1-206ENST00000562534 NUP50Q9UKX7 468 aa13.44□□□□□ -0.26
USB1-206ENST00000562534 ETV7Q9Y603 341 aa13.44□□□□□ -0.26
USB1-206ENST00000562534 A0A0B4J203 849 aa13.43□□□□□ -0.26
USB1-206ENST00000562534 UBE2QL1A1L167 161 aa13.43□□□□□ -0.26
USB1-206ENST00000562534 SOCS1O15524 211 aa13.43□□□□□ -0.26
USB1-206ENST00000562534 FSHBP01225 129 aa13.43□□□□□ -0.26
USB1-206ENST00000562534 FAM157CP0CG43 387 aa13.43□□□□□ -0.26
USB1-206ENST00000562534 CCL3L1P16619 93 aa13.43□□□□□ -0.26
Retrieved 100 of 20,778 RNA–protein pairs in 57.1 ms