RNA–Protein interactions for RNA: ENST00000562389.5

CLK3-207, Transcript of CDC like kinase 3, humanhuman

TSL 4

Gene CLK3, Length 572 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLK3-207ENST00000562389 GLIPR1P48060 266 aa13.68□□□□□ -0.22
CLK3-207ENST00000562389 PSMD7P51665 324 aa13.68□□□□□ -0.22
CLK3-207ENST00000562389 UBE2E1P51965 193 aa13.68□□□□□ -0.22
CLK3-207ENST00000562389 ERVFRD-1P60508 538 aa13.68□□□□□ -0.22
CLK3-207ENST00000562389 KLRD1Q13241 179 aa13.68□□□□□ -0.22
CLK3-207ENST00000562389 C22orf42Q6IC83 251 aa13.68□□□□□ -0.22
CLK3-207ENST00000562389 HCP5Q6MZN7 132 aa13.68□□□□□ -0.22
CLK3-207ENST00000562389 SIGLECL1Q8N7X8 197 aa13.68□□□□□ -0.22
CLK3-207ENST00000562389 CORO2AQ92828 525 aa13.68□□□□□ -0.22
CLK3-207ENST00000562389 SLC25A28Q96A46 364 aa13.68□□□□□ -0.22
CLK3-207ENST00000562389 ZNF48Q96MX3 618 aaPredicted RBP13.68□□□□□ -0.22
CLK3-207ENST00000562389 JMJD8Q96S16 334 aa13.68□□□□□ -0.22
CLK3-207ENST00000562389 SELENOIQ9C0D9 397 aa13.68□□□□□ -0.22
CLK3-207ENST00000562389 NCOR1P1Q9H4R4 102 aa13.68□□□□□ -0.22
CLK3-207ENST00000562389 PLGRKTQ9HBL7 147 aa13.68□□□□□ -0.22
CLK3-207ENST00000562389 SPACA1Q9HBV2 294 aa13.68□□□□□ -0.22
CLK3-207ENST00000562389 VCX3AQ9NNX9 186 aa13.68□□□□□ -0.22
CLK3-207ENST00000562389 RCC2Q9P258 522 aaKnown RBP13.68□□□□□ -0.22
CLK3-207ENST00000562389 V9GY05 133 aa13.68□□□□□ -0.22
CLK3-207ENST00000562389 TRGV10A0A0A0MS01 117 aa13.67□□□□□ -0.22
CLK3-207ENST00000562389 SHISA3A0PJX4 238 aa13.67□□□□□ -0.22
CLK3-207ENST00000562389 ODAMA1E959 279 aa13.67□□□□□ -0.22
CLK3-207ENST00000562389 TRIM64CA6NLI5 447 aa13.67□□□□□ -0.22
CLK3-207ENST00000562389 VENTXO95231 258 aa13.67□□□□□ -0.22
CLK3-207ENST00000562389 RANBP1P43487 201 aa13.67□□□□□ -0.22
CLK3-207ENST00000562389 PRB3Q04118 309 aaPredicted RBP13.67□□□□□ -0.22
CLK3-207ENST00000562389 RSBN1Q5VWQ0 802 aaPredicted RBP13.67□□□□□ -0.22
CLK3-207ENST00000562389 TRAPPC6BQ86SZ2 158 aa13.67□□□□□ -0.22
CLK3-207ENST00000562389 PDZD9Q8IXQ8 264 aa13.67□□□□□ -0.22
CLK3-207ENST00000562389 KCNG3Q8TAE7 436 aa13.67□□□□□ -0.22
CLK3-207ENST00000562389 BARHL1Q9BZE3 327 aa13.67□□□□□ -0.22
CLK3-207ENST00000562389 PRDM13Q9H4Q3 707 aa13.67□□□□□ -0.22
CLK3-207ENST00000562389 HEXA-AS1Q9H8Q6 139 aa13.67□□□□□ -0.22
CLK3-207ENST00000562389 TXNL4BQ9NX01 149 aaKnown RBP13.67□□□□□ -0.22
CLK3-207ENST00000562389 TAS2R3Q9NYW6 316 aa13.67□□□□□ -0.22
CLK3-207ENST00000562389 SSR3Q9UNL2 185 aa13.67□□□□□ -0.22
CLK3-207ENST00000562389 SOX21Q9Y651 276 aaPredicted RBP13.67□□□□□ -0.22
CLK3-207ENST00000562389 MXRA5Q9NR99 2828 aa13.67□□□□□ -0.22
CLK3-207ENST00000562389 MEX3AA1L020 520 aaKnown RBP13.66□□□□□ -0.22
CLK3-207ENST00000562389 TMEM14DPA8MWL7 114 aa13.66□□□□□ -0.22
CLK3-207ENST00000562389 MPIG6BO95866 241 aa13.66□□□□□ -0.22
CLK3-207ENST00000562389 IGHV1-8P0DP01 117 aa13.66□□□□□ -0.22
CLK3-207ENST00000562389 CFPP27918 469 aa13.66□□□□□ -0.22
CLK3-207ENST00000562389 QRFPP83859 136 aa13.66□□□□□ -0.22
CLK3-207ENST00000562389 RAB11BQ15907 218 aa13.66□□□□□ -0.22
CLK3-207ENST00000562389 ATAD3CQ5T2N8 411 aa13.66□□□□□ -0.22
CLK3-207ENST00000562389 RBMS3Q6XE24 437 aaKnown RBP13.66□□□□□ -0.22
CLK3-207ENST00000562389 PIP4P2Q8N4L2 257 aa13.66□□□□□ -0.22
CLK3-207ENST00000562389 PLPPR1Q8TBJ4 325 aa13.66□□□□□ -0.22
CLK3-207ENST00000562389 FAM46BQ96A09 425 aa13.66□□□□□ -0.22
CLK3-207ENST00000562389 TMEM59Q9BXS4 323 aa13.66□□□□□ -0.22
CLK3-207ENST00000562389 OR51E2Q9H255 320 aa13.66□□□□□ -0.22
CLK3-207ENST00000562389 GAL3ST2Q9H3Q3 398 aa13.66□□□□□ -0.22
CLK3-207ENST00000562389 ING3Q9NXR8 418 aa13.66□□□□□ -0.22
CLK3-207ENST00000562389 OR6C3Q9NZP0 311 aa13.66□□□□□ -0.22
CLK3-207ENST00000562389 KIAA2026Q5HYC2 2103 aa13.66□□□□□ -0.22
CLK3-207ENST00000562389 H3BUI4 141 aa13.65□□□□□ -0.22
CLK3-207ENST00000562389 NPFFO15130 113 aa13.65□□□□□ -0.22
CLK3-207ENST00000562389 CLPXO76031 633 aa13.65□□□□□ -0.22
CLK3-207ENST00000562389 ARSBP15848 533 aa13.65□□□□□ -0.22
CLK3-207ENST00000562389 CD36P16671 472 aa13.65□□□□□ -0.22
CLK3-207ENST00000562389 JUNBP17275 347 aaPredicted RBP13.65□□□□□ -0.22
CLK3-207ENST00000562389 RAB3BP20337 219 aa13.65□□□□□ -0.22
CLK3-207ENST00000562389 RPS27AP62979 156 aaKnown RBP13.65□□□□□ -0.22
CLK3-207ENST00000562389 UNC119Q13432 240 aa13.65□□□□□ -0.22
CLK3-207ENST00000562389 DEFB112Q30KQ8 113 aa13.65□□□□□ -0.22
CLK3-207ENST00000562389 SLC35E4Q6ICL7 350 aa13.65□□□□□ -0.22
CLK3-207ENST00000562389 OR10K2Q6IF99 312 aa13.65□□□□□ -0.22
CLK3-207ENST00000562389 ZNF782Q6ZMW2 699 aaPredicted RBP13.65□□□□□ -0.22
CLK3-207ENST00000562389 OR2W3Q7Z3T1 314 aa13.65□□□□□ -0.22
CLK3-207ENST00000562389 TM2D1Q9BX74 207 aa13.65□□□□□ -0.22
CLK3-207ENST00000562389 KCNK15Q9H427 330 aa13.65□□□□□ -0.22
CLK3-207ENST00000562389 ESM1Q9NQ30 184 aa13.65□□□□□ -0.22
CLK3-207ENST00000562389 STEAP1Q9UHE8 339 aa13.65□□□□□ -0.22
CLK3-207ENST00000562389 KIF25Q9UIL4 384 aa13.65□□□□□ -0.22
CLK3-207ENST00000562389 MEIKINA0A087WXM9 373 aa13.64□□□□□ -0.23
CLK3-207ENST00000562389 MDFIC2A0A1B0GVS7 189 aa13.64□□□□□ -0.23
CLK3-207ENST00000562389 ZNF729A6NN14 1252 aaPredicted RBP13.64□□□□□ -0.23
CLK3-207ENST00000562389 GLAP06280 429 aa13.64□□□□□ -0.23
CLK3-207ENST00000562389 GADD45AP24522 165 aa13.64□□□□□ -0.23
CLK3-207ENST00000562389 OR10A3P58181 314 aa13.64□□□□□ -0.23
CLK3-207ENST00000562389 SRSF2Q01130 221 aaKnown RBP13.64□□□□□ -0.23
CLK3-207ENST00000562389 RBM39Q14498 530 aaKnown RBP13.64□□□□□ -0.23
CLK3-207ENST00000562389 P2RY14Q15391 338 aa13.64□□□□□ -0.23
CLK3-207ENST00000562389 SIGIRRQ6IA17 410 aa13.64□□□□□ -0.23
CLK3-207ENST00000562389 RAB12Q6IQ22 244 aa13.64□□□□□ -0.23
CLK3-207ENST00000562389 ZDHHC22Q8N966 263 aa13.64□□□□□ -0.23
CLK3-207ENST00000562389 OR13D1Q8NGV5 346 aa13.64□□□□□ -0.23
CLK3-207ENST00000562389 ZFAND2BQ8WV99 257 aa13.64□□□□□ -0.23
CLK3-207ENST00000562389 FBLN5Q9UBX5 448 aa13.64□□□□□ -0.23
CLK3-207ENST00000562389 SESN1Q9Y6P5 492 aa13.64□□□□□ -0.23
CLK3-207ENST00000562389 A0A0U1RQK1 487 aa13.63□□□□□ -0.23
CLK3-207ENST00000562389 TMEM30CPA0ZSE6 113 aa13.63□□□□□ -0.23
CLK3-207ENST00000562389 IFITM5A6NNB3 132 aa13.63□□□□□ -0.23
CLK3-207ENST00000562389 MCRIP1C9JLW8 97 aa13.63□□□□□ -0.23
CLK3-207ENST00000562389 PDCD6O75340 191 aa13.63□□□□□ -0.23
CLK3-207ENST00000562389 CGB3P0DN86 165 aa13.63□□□□□ -0.23
CLK3-207ENST00000562389 CGB7P0DN87 165 aa13.63□□□□□ -0.23
CLK3-207ENST00000562389 FUT3P21217 361 aa13.63□□□□□ -0.23
CLK3-207ENST00000562389 SAA4P35542 130 aa13.63□□□□□ -0.23
Retrieved 100 of 20,778 RNA–protein pairs in 33 ms