RNA–Protein interactions for RNA: ENST00000561391.1

SPG11-225, Transcript of SPG11, spatacsin vesicle trafficking associated, humanhuman

TSL 3

Gene SPG11, Length 629 nt, Biotype retained intron, Subcellular localisation Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPG11-225ENST00000561391 EXTL2Q9UBQ6 330 aa2.65□□□□□ -1.99
SPG11-225ENST00000561391 IKZF2Q9UKS7 526 aa2.65□□□□□ -1.99
SPG11-225ENST00000561391 NUP50Q9UKX7 468 aa2.65□□□□□ -1.99
SPG11-225ENST00000561391 ZNF346Q9UL40 294 aaKnown RBP2.65□□□□□ -1.99
SPG11-225ENST00000561391 SPATA2Q9UM82 520 aa2.65□□□□□ -1.99
SPG11-225ENST00000561391 FOXJ3Q9UPW0 622 aa2.65□□□□□ -1.99
SPG11-225ENST00000561391 VDAC3Q9Y277 283 aa2.65□□□□□ -1.99
SPG11-225ENST00000561391 AMDHD2Q9Y303 409 aa2.65□□□□□ -1.99
SPG11-225ENST00000561391 MRPS18CQ9Y3D5 142 aaKnown RBP2.65□□□□□ -1.99
SPG11-225ENST00000561391 V9GY05 133 aa2.65□□□□□ -1.99
SPG11-225ENST00000561391 LYSTQ99698 3801 aa2.65□□□□□ -1.99
SPG11-225ENST00000561391 IGHV3OR16-10A0A075B7F0 116 aa2.64□□□□□ -1.99
SPG11-225ENST00000561391 IGLV1-36A0A0B4J1U3 117 aa2.64□□□□□ -1.99
SPG11-225ENST00000561391 A0A0G2JMP0 313 aa2.64□□□□□ -1.99
SPG11-225ENST00000561391 A0A0X1KG70 313 aa2.64□□□□□ -1.99
SPG11-225ENST00000561391 MDFIC2A0A1B0GVS7 189 aa2.64□□□□□ -1.99
SPG11-225ENST00000561391 TMEM72A0PK05 275 aa2.64□□□□□ -1.99
SPG11-225ENST00000561391 MEIOCA2RUB1 952 aa2.64□□□□□ -1.99
SPG11-225ENST00000561391 METTL21EPA6NDL7 271 aa2.64□□□□□ -1.99
SPG11-225ENST00000561391 OR6C65A6NJZ3 312 aa2.64□□□□□ -1.99
SPG11-225ENST00000561391 ANXA2P2A6NMY6 339 aa2.64□□□□□ -1.99
SPG11-225ENST00000561391 OR4C45A6NMZ5 311 aa2.64□□□□□ -1.99
SPG11-225ENST00000561391 E9PI62 339 aa2.64□□□□□ -1.99
SPG11-225ENST00000561391 GABARAPH6UMI1 98 aa2.64□□□□□ -1.99
SPG11-225ENST00000561391 M0R1B8 84 aa2.64□□□□□ -1.99
SPG11-225ENST00000561391 SULT2B1O00204 365 aa2.64□□□□□ -1.99
SPG11-225ENST00000561391 SULT1C2O00338 296 aa2.64□□□□□ -1.99
SPG11-225ENST00000561391 LYRM1O43325 122 aa2.64□□□□□ -1.99
SPG11-225ENST00000561391 PRAF2O60831 178 aa2.64□□□□□ -1.99
SPG11-225ENST00000561391 UPK3AO75631 287 aa2.64□□□□□ -1.99
SPG11-225ENST00000561391 CCNKO75909 580 aa2.64□□□□□ -1.99
SPG11-225ENST00000561391 GYPBP06028 91 aa2.64□□□□□ -1.99
SPG11-225ENST00000561391 UBCP0CG48 685 aaKnown RBP2.64□□□□□ -1.99
SPG11-225ENST00000561391 CLUP10909 449 aa2.64□□□□□ -1.99
SPG11-225ENST00000561391 SELLP14151 372 aa2.64□□□□□ -1.99
SPG11-225ENST00000561391 MMP9P14780 707 aa2.64□□□□□ -1.99
SPG11-225ENST00000561391 ZNF17P17021 662 aa2.64□□□□□ -1.99
SPG11-225ENST00000561391 ZNF43P17038 809 aa2.64□□□□□ -1.99
SPG11-225ENST00000561391 ELK1P19419 428 aa2.64□□□□□ -1.99
SPG11-225ENST00000561391 C4BPBP20851 252 aa2.64□□□□□ -1.99
SPG11-225ENST00000561391 ACHEP22303 614 aa2.64□□□□□ -1.99
SPG11-225ENST00000561391 LAP3P28838 519 aa2.64□□□□□ -1.99
SPG11-225ENST00000561391 SLC6A1P30531 599 aa2.64□□□□□ -1.99
SPG11-225ENST00000561391 TGFBR1P36897 503 aa2.64□□□□□ -1.99
SPG11-225ENST00000561391 DDOSTP39656 456 aa2.64□□□□□ -1.99
SPG11-225ENST00000561391 NAA10P41227 235 aaPredicted RBP2.64□□□□□ -1.99
SPG11-225ENST00000561391 CASP3P42574 277 aa2.64□□□□□ -1.99
SPG11-225ENST00000561391 CLDN20P56880 219 aa2.64□□□□□ -1.99
SPG11-225ENST00000561391 RPS11P62280 158 aaKnown RBP eCLIP2.64□□□□□ -1.99
SPG11-225ENST00000561391 LSM6P62312 80 aaKnown RBP2.64□□□□□ -1.99
SPG11-225ENST00000561391 SNRPD2P62316 118 aaKnown RBP2.64□□□□□ -1.99
SPG11-225ENST00000561391 RELQ04864 619 aaPredicted RBP2.64□□□□□ -1.99
SPG11-225ENST00000561391 ECH1Q13011 328 aa2.64□□□□□ -1.99
SPG11-225ENST00000561391 SNTB2Q13425 540 aaKnown RBP2.64□□□□□ -1.99
SPG11-225ENST00000561391 EIF2B1Q14232 305 aaKnown RBP2.64□□□□□ -1.99
SPG11-225ENST00000561391 ARL6IP1Q15041 203 aa2.64□□□□□ -1.99
SPG11-225ENST00000561391 TAF13Q15543 124 aa2.64□□□□□ -1.99
SPG11-225ENST00000561391 OR7A5Q15622 319 aa2.64□□□□□ -1.99
SPG11-225ENST00000561391 ZNF79Q15937 498 aa2.64□□□□□ -1.99
SPG11-225ENST00000561391 MEP1BQ16820 701 aa2.64□□□□□ -1.99
SPG11-225ENST00000561391 PLPPR5Q32ZL2 321 aa2.64□□□□□ -1.99
SPG11-225ENST00000561391 NDUFAF6Q330K2 333 aa2.64□□□□□ -1.99
SPG11-225ENST00000561391 PCGF3Q3KNV8 242 aa2.64□□□□□ -1.99
SPG11-225ENST00000561391 MESTQ5EB52 335 aa2.64□□□□□ -1.99
SPG11-225ENST00000561391 PDSS1Q5T2R2 415 aa2.64□□□□□ -1.99
SPG11-225ENST00000561391 RSBN1Q5VWQ0 802 aaPredicted RBP2.64□□□□□ -1.99
SPG11-225ENST00000561391 GLT8D1Q68CQ7 371 aa2.64□□□□□ -1.99
SPG11-225ENST00000561391 ZNF57Q68EA5 555 aaPredicted RBP2.64□□□□□ -1.99
SPG11-225ENST00000561391 RAB12Q6IQ22 244 aa2.64□□□□□ -1.99
SPG11-225ENST00000561391 FAM122CQ6P4D5 195 aa2.64□□□□□ -1.99
SPG11-225ENST00000561391 TMPPEQ6ZT21 453 aa2.64□□□□□ -1.99
SPG11-225ENST00000561391 SLC35D2Q76EJ3 337 aa2.64□□□□□ -1.99
SPG11-225ENST00000561391 BHLHA15Q7RTS1 189 aaPredicted RBP2.64□□□□□ -1.99
SPG11-225ENST00000561391 DPY19L4Q7Z388 723 aa2.64□□□□□ -1.99
SPG11-225ENST00000561391 NRARPQ7Z6K4 114 aa2.64□□□□□ -1.99
SPG11-225ENST00000561391 SERPINA12Q8IW75 414 aa2.64□□□□□ -1.99
SPG11-225ENST00000561391 PRR22Q8IZ63 422 aa2.64□□□□□ -1.99
SPG11-225ENST00000561391 LYG1Q8N1E2 194 aa2.64□□□□□ -1.99
SPG11-225ENST00000561391 GTPBP8Q8N3Z3 284 aaPredicted RBP2.64□□□□□ -1.99
SPG11-225ENST00000561391 TOMM5Q8N4H5 51 aa2.64□□□□□ -1.99
SPG11-225ENST00000561391 ZNF433Q8N7K0 673 aaPredicted RBP2.64□□□□□ -1.99
SPG11-225ENST00000561391 NKAIN3Q8N8D7 197 aa2.64□□□□□ -1.99
SPG11-225ENST00000561391 ZFP41Q8N8Y5 198 aa2.64□□□□□ -1.99
SPG11-225ENST00000561391 FADS6Q8N9I5 356 aa2.64□□□□□ -1.99
SPG11-225ENST00000561391 OR2M3Q8NG83 312 aa2.64□□□□□ -1.99
SPG11-225ENST00000561391 OR4M2Q8NGB6 313 aa2.64□□□□□ -1.99
SPG11-225ENST00000561391 OR51L1Q8NGJ5 315 aa2.64□□□□□ -1.99
SPG11-225ENST00000561391 OR5D14Q8NGL3 314 aa2.64□□□□□ -1.99
SPG11-225ENST00000561391 OR6M1Q8NGM8 313 aa2.64□□□□□ -1.99
SPG11-225ENST00000561391 OR6N2Q8NGY6 317 aa2.64□□□□□ -1.99
SPG11-225ENST00000561391 OR2G2Q8NGZ5 317 aa2.64□□□□□ -1.99
SPG11-225ENST00000561391 OR52N5Q8NH56 324 aa2.64□□□□□ -1.99
SPG11-225ENST00000561391 OR5R1Q8NH85 324 aa2.64□□□□□ -1.99
SPG11-225ENST00000561391 TRMT10AQ8TBZ6 339 aaKnown RBP2.64□□□□□ -1.99
SPG11-225ENST00000561391 ASB13Q8WXK3 278 aa2.64□□□□□ -1.99
SPG11-225ENST00000561391 MCHR2Q969V1 340 aa2.64□□□□□ -1.99
SPG11-225ENST00000561391 C10orf35Q96D05 121 aa2.64□□□□□ -1.99
SPG11-225ENST00000561391 RASD2Q96D21 266 aa2.64□□□□□ -1.99
SPG11-225ENST00000561391 CPNE2Q96FN4 548 aaPredicted RBP2.64□□□□□ -1.99
SPG11-225ENST00000561391 C4orf45Q96LM5 186 aa2.64□□□□□ -1.99
Retrieved 100 of 20,778 RNA–protein pairs in 27.7 ms