RNA–Protein interactions for RNA: ENST00000560970.5

TPM1-227, Transcript of tropomyosin 1, humanhuman

TSL 1 (best)

Gene TPM1, Length 1,039 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM1-227ENST00000560970 OR10K1Q8NGX5 313 aa8.73□□□□□ -1.01
TPM1-227ENST00000560970 TNFAIP8L1Q8WVP5 186 aa8.73□□□□□ -1.01
TPM1-227ENST00000560970 TMED9Q9BVK6 235 aa8.73□□□□□ -1.01
TPM1-227ENST00000560970 RANBP3Q9H6Z4 567 aaPredicted RBP8.73□□□□□ -1.01
TPM1-227ENST00000560970 METTL8Q9H825 291 aaKnown RBP8.73□□□□□ -1.01
TPM1-227ENST00000560970 FBLN5Q9UBX5 448 aa8.73□□□□□ -1.01
TPM1-227ENST00000560970 GSTK1Q9Y2Q3 226 aa8.73□□□□□ -1.01
TPM1-227ENST00000560970 MEX3AA1L020 520 aaKnown RBP8.72□□□□□ -1.01
TPM1-227ENST00000560970 H3BUX3 64 aa8.72□□□□□ -1.01
TPM1-227ENST00000560970 K7N7A8 449 aa8.72□□□□□ -1.01
TPM1-227ENST00000560970 AIREO43918 545 aa8.72□□□□□ -1.01
TPM1-227ENST00000560970 PSPNO60542 156 aa8.72□□□□□ -1.01
TPM1-227ENST00000560970 SC5DO75845 299 aa8.72□□□□□ -1.01
TPM1-227ENST00000560970 CYB5AP00167 134 aa8.72□□□□□ -1.01
TPM1-227ENST00000560970 ALDOBP05062 364 aa8.72□□□□□ -1.01
TPM1-227ENST00000560970 CHRM2P08172 466 aa8.72□□□□□ -1.01
TPM1-227ENST00000560970 HSMCR30P0CW71 290 aa8.72□□□□□ -1.01
TPM1-227ENST00000560970 TMEM225BP0DP42 221 aa8.72□□□□□ -1.01
TPM1-227ENST00000560970 BDKRB2P30411 391 aa8.72□□□□□ -1.01
TPM1-227ENST00000560970 UBE2E1P51965 193 aa8.72□□□□□ -1.01
TPM1-227ENST00000560970 EFNB2P52799 333 aa8.72□□□□□ -1.01
TPM1-227ENST00000560970 RPS25P62851 125 aaKnown RBP8.72□□□□□ -1.01
TPM1-227ENST00000560970 LRRC75BQ2VPJ9 315 aa8.72□□□□□ -1.01
TPM1-227ENST00000560970 SAMD5Q5TGI4 173 aa8.72□□□□□ -1.01
TPM1-227ENST00000560970 TCF23Q7RTU1 214 aa8.72□□□□□ -1.01
TPM1-227ENST00000560970 REC114Q7Z4M0 266 aa8.72□□□□□ -1.01
TPM1-227ENST00000560970 FAM185AQ8N0U4 392 aa8.72□□□□□ -1.01
TPM1-227ENST00000560970 PXT1Q8NFP0 134 aa8.72□□□□□ -1.01
TPM1-227ENST00000560970 UFD1Q92890 307 aa8.72□□□□□ -1.01
TPM1-227ENST00000560970 TNFRSF14Q92956 283 aa8.72□□□□□ -1.01
TPM1-227ENST00000560970 GPER1Q99527 375 aa8.72□□□□□ -1.01
TPM1-227ENST00000560970 DCUN1D5Q9BTE7 237 aa8.72□□□□□ -1.01
TPM1-227ENST00000560970 CHST6Q9GZX3 395 aa8.72□□□□□ -1.01
TPM1-227ENST00000560970 PPIL3Q9H2H8 161 aaKnown RBP8.72□□□□□ -1.01
TPM1-227ENST00000560970 RAB18Q9NP72 206 aa8.72□□□□□ -1.01
TPM1-227ENST00000560970 TMEM138Q9NPI0 162 aa8.72□□□□□ -1.01
TPM1-227ENST00000560970 NDUFB11Q9NX14 153 aa8.72□□□□□ -1.01
TPM1-227ENST00000560970 ZNF581Q9P0T4 197 aa8.72□□□□□ -1.01
TPM1-227ENST00000560970 DNAH3Q8TD57 4116 aa8.71□□□□□ -1.01
TPM1-227ENST00000560970 TRBV23-1A0A0A0MS06 115 aa8.71□□□□□ -1.02
TPM1-227ENST00000560970 SIRPB1O00241 398 aa8.71□□□□□ -1.02
TPM1-227ENST00000560970 MAGEB3O15480 346 aa8.71□□□□□ -1.02
TPM1-227ENST00000560970 CDRT1O95170 752 aa8.71□□□□□ -1.02
TPM1-227ENST00000560970 OR2H2O95918 312 aa8.71□□□□□ -1.02
TPM1-227ENST00000560970 MAS1P04201 325 aa8.71□□□□□ -1.02
TPM1-227ENST00000560970 CCL3L1P16619 93 aa8.71□□□□□ -1.02
TPM1-227ENST00000560970 CPEP16870 476 aa8.71□□□□□ -1.02
TPM1-227ENST00000560970 GADD45AP24522 165 aa8.71□□□□□ -1.02
TPM1-227ENST00000560970 ZNF93P35789 620 aaPredicted RBP8.71□□□□□ -1.02
TPM1-227ENST00000560970 OR3A1P47881 315 aa8.71□□□□□ -1.02
TPM1-227ENST00000560970 RPL31P62899 125 aaKnown RBP8.71□□□□□ -1.02
TPM1-227ENST00000560970 TPBGQ13641 420 aa8.71□□□□□ -1.02
TPM1-227ENST00000560970 SPCS2Q15005 226 aa8.71□□□□□ -1.02
TPM1-227ENST00000560970 SSX1Q16384 188 aa8.71□□□□□ -1.02
TPM1-227ENST00000560970 ACSM3Q53FZ2 586 aa8.71□□□□□ -1.02
TPM1-227ENST00000560970 FBLN7Q53RD9 439 aa8.71□□□□□ -1.02
TPM1-227ENST00000560970 SPIN3Q5JUX0 258 aa8.71□□□□□ -1.02
TPM1-227ENST00000560970 SLC35E4Q6ICL7 350 aa8.71□□□□□ -1.02
TPM1-227ENST00000560970 Q6P435 159 aa8.71□□□□□ -1.02
TPM1-227ENST00000560970 UNQ9370/PRO34162Q6UXP9 181 aa8.71□□□□□ -1.02
TPM1-227ENST00000560970 LIAT1Q6ZQX7 453 aa8.71□□□□□ -1.02
TPM1-227ENST00000560970 LINC00299Q6ZSB3 139 aa8.71□□□□□ -1.02
TPM1-227ENST00000560970 C1orf122Q6ZSJ8 110 aa8.71□□□□□ -1.02
TPM1-227ENST00000560970 LYPD6Q86Y78 171 aa8.71□□□□□ -1.02
TPM1-227ENST00000560970 OR8H2Q8N162 312 aa8.71□□□□□ -1.02
TPM1-227ENST00000560970 KLHDC1Q8N7A1 406 aa8.71□□□□□ -1.02
TPM1-227ENST00000560970 TPRX1Q8N7U7 411 aa8.71□□□□□ -1.02
TPM1-227ENST00000560970 OR4S1Q8NGB4 309 aa8.71□□□□□ -1.02
TPM1-227ENST00000560970 OR2T6Q8NHC8 308 aa8.71□□□□□ -1.02
TPM1-227ENST00000560970 SNX22Q96L94 193 aa8.71□□□□□ -1.02
TPM1-227ENST00000560970 FAM234AQ9H0X4 552 aa8.71□□□□□ -1.02
TPM1-227ENST00000560970 SEBOXQ9HB31 216 aaPredicted RBP8.71□□□□□ -1.02
TPM1-227ENST00000560970 EXOSC4Q9NPD3 245 aaKnown RBP8.71□□□□□ -1.02
TPM1-227ENST00000560970 FOXJ3Q9UPW0 622 aa8.71□□□□□ -1.02
TPM1-227ENST00000560970 SF3B6Q9Y3B4 125 aaKnown RBP8.71□□□□□ -1.02
TPM1-227ENST00000560970 A0A1W2PP11 408 aa8.7□□□□□ -1.02
TPM1-227ENST00000560970 GABRR1P24046 479 aa8.7□□□□□ -1.02
TPM1-227ENST00000560970 MAPK3P27361 379 aaPredicted RBP8.7□□□□□ -1.02
TPM1-227ENST00000560970 PTGFRP43088 359 aa8.7□□□□□ -1.02
TPM1-227ENST00000560970 SERPINB10P48595 397 aa8.7□□□□□ -1.02
TPM1-227ENST00000560970 MTNR1BP49286 362 aa8.7□□□□□ -1.02
TPM1-227ENST00000560970 DLX6P56179 175 aa8.7□□□□□ -1.02
TPM1-227ENST00000560970 ERVFRD-1P60508 538 aa8.7□□□□□ -1.02
TPM1-227ENST00000560970 DYNC1I2Q13409 638 aaKnown RBP8.7□□□□□ -1.02
TPM1-227ENST00000560970 EDDM3AQ14507 147 aa8.7□□□□□ -1.02
TPM1-227ENST00000560970 AANATQ16613 207 aa8.7□□□□□ -1.02
TPM1-227ENST00000560970 PIGYQ3MUY2 71 aa8.7□□□□□ -1.02
TPM1-227ENST00000560970 TMEM200BQ69YZ2 307 aa8.7□□□□□ -1.02
TPM1-227ENST00000560970 ELP2Q6IA86 826 aa8.7□□□□□ -1.02
TPM1-227ENST00000560970 HCP5Q6MZN7 132 aa8.7□□□□□ -1.02
TPM1-227ENST00000560970 ASCL4Q6XD76 172 aa8.7□□□□□ -1.02
TPM1-227ENST00000560970 TMEM91Q6ZNR0 172 aa8.7□□□□□ -1.02
TPM1-227ENST00000560970 LRRTM1Q86UE6 522 aa8.7□□□□□ -1.02
TPM1-227ENST00000560970 C11orf42Q8N5U0 333 aa8.7□□□□□ -1.02
TPM1-227ENST00000560970 OR5D13Q8NGL4 314 aa8.7□□□□□ -1.02
TPM1-227ENST00000560970 CFHR4Q92496 578 aa8.7□□□□□ -1.02
TPM1-227ENST00000560970 TMEM203Q969S6 136 aa8.7□□□□□ -1.02
TPM1-227ENST00000560970 CPNE2Q96FN4 548 aaPredicted RBP8.7□□□□□ -1.02
TPM1-227ENST00000560970 SSX3Q99909 188 aa8.7□□□□□ -1.02
TPM1-227ENST00000560970 NPFFR1Q9GZQ6 430 aa8.7□□□□□ -1.02
Retrieved 100 of 20,778 RNA–protein pairs in 28.2 ms