RNA–Protein interactions for RNA: ENST00000560881.5

RPL28-211, Transcript of ribosomal protein L28, humanhuman

TSL 5

Gene RPL28, Length 1,692 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPL28-211ENST00000560881 LOC100506127A0A0U1RQW1 187 aa13.71□□□□□ -0.21
RPL28-211ENST00000560881 CRTAPO75718 401 aaPredicted RBP13.71□□□□□ -0.21
RPL28-211ENST00000560881 OR7C1O76099 320 aaPredicted RBP13.71□□□□□ -0.21
RPL28-211ENST00000560881 TOX4O94842 621 aa13.71□□□□□ -0.21
RPL28-211ENST00000560881 PTTG1O95997 202 aa13.71□□□□□ -0.21
RPL28-211ENST00000560881 FAM157CP0CG43 387 aa13.71□□□□□ -0.21
RPL28-211ENST00000560881 GTF2F2P13984 249 aa13.71□□□□□ -0.21
RPL28-211ENST00000560881 CCL3L1P16619 93 aa13.71□□□□□ -0.21
RPL28-211ENST00000560881 GALP22466 123 aa13.71□□□□□ -0.21
RPL28-211ENST00000560881 MYL9P24844 172 aa13.71□□□□□ -0.21
RPL28-211ENST00000560881 LMO1P25800 156 aa13.71□□□□□ -0.21
RPL28-211ENST00000560881 ERVFRD-1P60508 538 aa13.71□□□□□ -0.21
RPL28-211ENST00000560881 IL13RA2Q14627 380 aa13.71□□□□□ -0.21
RPL28-211ENST00000560881 TAF9Q16594 264 aa13.71□□□□□ -0.21
RPL28-211ENST00000560881 METTL11BQ5VVY1 283 aa13.71□□□□□ -0.21
RPL28-211ENST00000560881 TMEM200BQ69YZ2 307 aa13.71□□□□□ -0.21
RPL28-211ENST00000560881 TCF23Q7RTU1 214 aa13.71□□□□□ -0.21
RPL28-211ENST00000560881 NR2C2APQ86WQ0 139 aa13.71□□□□□ -0.21
RPL28-211ENST00000560881 BPIFB2Q8N4F0 458 aa13.71□□□□□ -0.21
RPL28-211ENST00000560881 Q8N7P7 452 aa13.71□□□□□ -0.21
RPL28-211ENST00000560881 UPRTQ96BW1 309 aa13.71□□□□□ -0.21
RPL28-211ENST00000560881 FOXRED1Q96CU9 486 aaPredicted RBP13.71□□□□□ -0.21
RPL28-211ENST00000560881 SLIRPQ9GZT3 109 aaKnown RBP13.71□□□□□ -0.21
RPL28-211ENST00000560881 SIRT7Q9NRC8 400 aa13.71□□□□□ -0.21
RPL28-211ENST00000560881 SSR3Q9UNL2 185 aa13.71□□□□□ -0.21
RPL28-211ENST00000560881 TRBV23-1A0A0A0MS06 115 aa13.7□□□□□ -0.22
RPL28-211ENST00000560881 ZNF780AO75290 641 aaPredicted RBP13.7□□□□□ -0.22
RPL28-211ENST00000560881 CD37P11049 281 aa13.7□□□□□ -0.22
RPL28-211ENST00000560881 MGMTP16455 207 aa13.7□□□□□ -0.22
RPL28-211ENST00000560881 HTR2CP28335 458 aa13.7□□□□□ -0.22
RPL28-211ENST00000560881 FGF9P31371 208 aaPredicted RBP13.7□□□□□ -0.22
RPL28-211ENST00000560881 TGFBR1P36897 503 aa13.7□□□□□ -0.22
RPL28-211ENST00000560881 AESQ08117 197 aa13.7□□□□□ -0.22
RPL28-211ENST00000560881 NHLRC3Q5JS37 347 aa13.7□□□□□ -0.22
RPL28-211ENST00000560881 HES5Q5TA89 166 aa13.7□□□□□ -0.22
RPL28-211ENST00000560881 BRICD5Q6PL45 260 aa13.7□□□□□ -0.22
RPL28-211ENST00000560881 VMO1Q7Z5L0 202 aa13.7□□□□□ -0.22
RPL28-211ENST00000560881 PDZD9Q8IXQ8 264 aa13.7□□□□□ -0.22
RPL28-211ENST00000560881 SLC7A5P1Q8MH63 180 aa13.7□□□□□ -0.22
RPL28-211ENST00000560881 NANPQ8TBE9 248 aa13.7□□□□□ -0.22
RPL28-211ENST00000560881 SLC25A28Q96A46 364 aa13.7□□□□□ -0.22
RPL28-211ENST00000560881 ZNF486Q96H40 463 aaPredicted RBP13.7□□□□□ -0.22
RPL28-211ENST00000560881 SELENOIQ9C0D9 397 aa13.7□□□□□ -0.22
RPL28-211ENST00000560881 MMP27Q9H306 513 aa13.7□□□□□ -0.22
RPL28-211ENST00000560881 SOX21Q9Y651 276 aaPredicted RBP13.7□□□□□ -0.22
RPL28-211ENST00000560881 TRAV1-2A0A0B4J238 106 aa13.69□□□□□ -0.22
RPL28-211ENST00000560881 SLC17A2O00624 439 aa13.69□□□□□ -0.22
RPL28-211ENST00000560881 MPIG6BO95866 241 aa13.69□□□□□ -0.22
RPL28-211ENST00000560881 VSIG8P0DPA2 414 aa13.69□□□□□ -0.22
RPL28-211ENST00000560881 UNC119Q13432 240 aa13.69□□□□□ -0.22
RPL28-211ENST00000560881 PAN3Q58A45 887 aaKnown RBP13.69□□□□□ -0.22
RPL28-211ENST00000560881 PRIMA1Q86XR5 153 aa13.69□□□□□ -0.22
RPL28-211ENST00000560881 LYSMD2Q8IV50 215 aa13.69□□□□□ -0.22
RPL28-211ENST00000560881 OR6M1Q8NGM8 313 aa13.69□□□□□ -0.22
RPL28-211ENST00000560881 COQ2Q96H96 371 aa13.69□□□□□ -0.22
RPL28-211ENST00000560881 POM121Q96HA1 1249 aa13.69□□□□□ -0.22
RPL28-211ENST00000560881 CENPOQ9BU64 300 aa13.69□□□□□ -0.22
RPL28-211ENST00000560881 V9GY05 133 aa13.69□□□□□ -0.22
RPL28-211ENST00000560881 MGST3O14880 152 aa13.69□□□□□ -0.22
RPL28-211ENST00000560881 EPHA1P21709 976 aa13.69□□□□□ -0.22
RPL28-211ENST00000560881 GLIPR1P48060 266 aa13.69□□□□□ -0.22
RPL28-211ENST00000560881 KLRD1Q13241 179 aa13.69□□□□□ -0.22
RPL28-211ENST00000560881 GPR176Q14439 515 aa13.69□□□□□ -0.22
RPL28-211ENST00000560881 RUSC1-AS1Q66K80 236 aa13.69□□□□□ -0.22
RPL28-211ENST00000560881 BRD3OSQ6XYD6 125 aa13.69□□□□□ -0.22
RPL28-211ENST00000560881 CHST4Q8NCG5 386 aa13.69□□□□□ -0.22
RPL28-211ENST00000560881 OR5D13Q8NGL4 314 aa13.69□□□□□ -0.22
RPL28-211ENST00000560881 KPTNQ9Y664 436 aa13.69□□□□□ -0.22
RPL28-211ENST00000560881 A0A0B4J203 849 aa13.68□□□□□ -0.22
RPL28-211ENST00000560881 RAB3BP20337 219 aa13.68□□□□□ -0.22
RPL28-211ENST00000560881 QRFPP83859 136 aa13.68□□□□□ -0.22
RPL28-211ENST00000560881 IFITM2Q01629 132 aa13.68□□□□□ -0.22
RPL28-211ENST00000560881 PLA2G7Q13093 441 aa13.68□□□□□ -0.22
RPL28-211ENST00000560881 RAB11BQ15907 218 aa13.68□□□□□ -0.22
RPL28-211ENST00000560881 ATAD3CQ5T2N8 411 aa13.68□□□□□ -0.22
RPL28-211ENST00000560881 BCL6BQ8N143 479 aaPredicted RBP13.68□□□□□ -0.22
RPL28-211ENST00000560881 SUMF2Q8NBJ7 301 aa13.68□□□□□ -0.22
RPL28-211ENST00000560881 MCFD2Q8NI22 146 aa13.68□□□□□ -0.22
RPL28-211ENST00000560881 PLPPR1Q8TBJ4 325 aa13.68□□□□□ -0.22
RPL28-211ENST00000560881 LHX4Q969G2 390 aa13.68□□□□□ -0.22
RPL28-211ENST00000560881 Q96M66 194 aa13.68□□□□□ -0.22
RPL28-211ENST00000560881 ZNF69Q9UC07 566 aa13.68□□□□□ -0.22
RPL28-211ENST00000560881 FAM172BPA6NC97 362 aa13.67□□□□□ -0.22
RPL28-211ENST00000560881 P2RX3P56373 397 aa13.67□□□□□ -0.22
RPL28-211ENST00000560881 VBP1P61758 197 aa13.67□□□□□ -0.22
RPL28-211ENST00000560881 LSM3P62310 102 aaKnown RBP13.67□□□□□ -0.22
RPL28-211ENST00000560881 MXD1Q05195 221 aa13.67□□□□□ -0.22
RPL28-211ENST00000560881 MPV17LQ2QL34 196 aa13.67□□□□□ -0.22
RPL28-211ENST00000560881 KRBOX4Q5JUW0 171 aa13.67□□□□□ -0.22
RPL28-211ENST00000560881 RTN4RL2Q86UN3 420 aa13.67□□□□□ -0.22
RPL28-211ENST00000560881 C11orf42Q8N5U0 333 aa13.67□□□□□ -0.22
RPL28-211ENST00000560881 KIR3DL3Q8N743 410 aa13.67□□□□□ -0.22
RPL28-211ENST00000560881 OR51D1Q8NGF3 324 aa13.67□□□□□ -0.22
RPL28-211ENST00000560881 PPP1R35Q8TAP8 253 aa13.67□□□□□ -0.22
RPL28-211ENST00000560881 NICN1Q9BSH3 213 aa13.67□□□□□ -0.22
RPL28-211ENST00000560881 DPCDQ9BVM2 203 aaPredicted RBP13.67□□□□□ -0.22
RPL28-211ENST00000560881 PCDHB16Q9NRJ7 776 aa13.67□□□□□ -0.22
RPL28-211ENST00000560881 GHRLQ9UBU3 117 aa13.67□□□□□ -0.22
RPL28-211ENST00000560881 CENPVL3A0A0U1RRI6 287 aa13.66□□□□□ -0.22
RPL28-211ENST00000560881 TMEM14DPA8MWL7 114 aa13.66□□□□□ -0.22
Retrieved 100 of 20,778 RNA–protein pairs in 28.9 ms