RNA–Protein interactions for RNA: ENST00000560829.5

SNX1-211, Transcript of sorting nexin 1, humanhuman

TSL 5 BASIC

Gene SNX1, Length 1,869 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX1-211ENST00000560829 MOB3AQ96BX8 217 aa10.89□□□□□ -0.67
SNX1-211ENST00000560829 ELMOD3Q96FG2 381 aa10.89□□□□□ -0.67
SNX1-211ENST00000560829 SYT3Q9BQG1 590 aa10.89□□□□□ -0.67
SNX1-211ENST00000560829 TMPRSS13Q9BYE2 586 aa10.89□□□□□ -0.67
SNX1-211ENST00000560829 SEBOXQ9HB31 216 aaPredicted RBP10.89□□□□□ -0.67
SNX1-211ENST00000560829 RASL12Q9NYN1 266 aa10.89□□□□□ -0.67
SNX1-211ENST00000560829 SLC23A1Q9UHI7 598 aa10.89□□□□□ -0.67
SNX1-211ENST00000560829 GLS2Q9UI32 602 aa10.89□□□□□ -0.67
SNX1-211ENST00000560829 NCOR2Q9Y618 2525 aa10.89□□□□□ -0.67
SNX1-211ENST00000560829 IFNL4K9M1U5 179 aa10.89□□□□□ -0.67
SNX1-211ENST00000560829 SIRPB1O00241 398 aa10.89□□□□□ -0.67
SNX1-211ENST00000560829 SIX6O95475 246 aa10.89□□□□□ -0.67
SNX1-211ENST00000560829 PI3P19957 117 aa10.89□□□□□ -0.67
SNX1-211ENST00000560829 CHRNB4P30926 498 aa10.89□□□□□ -0.67
SNX1-211ENST00000560829 GATA4P43694 442 aa10.89□□□□□ -0.67
SNX1-211ENST00000560829 SEC61A1P61619 476 aaKnown RBP10.89□□□□□ -0.67
SNX1-211ENST00000560829 IGSF11Q5DX21 431 aa10.89□□□□□ -0.67
SNX1-211ENST00000560829 ZNF497Q6ZNH5 498 aa10.89□□□□□ -0.67
SNX1-211ENST00000560829 C20orf204Q6ZNR8 217 aa10.89□□□□□ -0.67
SNX1-211ENST00000560829 MOB1BQ7L9L4 216 aa10.89□□□□□ -0.67
SNX1-211ENST00000560829 FAM90A1Q86YD7 464 aa10.89□□□□□ -0.67
SNX1-211ENST00000560829 WDR89Q96FK6 387 aaPredicted RBP10.89□□□□□ -0.67
SNX1-211ENST00000560829 MEGF10Q96KG7 1140 aa10.89□□□□□ -0.67
SNX1-211ENST00000560829 CLEC4MQ9H2X3 399 aaPredicted RBP10.89□□□□□ -0.67
SNX1-211ENST00000560829 NGBQ9NPG2 151 aa10.89□□□□□ -0.67
SNX1-211ENST00000560829 UFSP2Q9NUQ7 469 aa10.89□□□□□ -0.67
SNX1-211ENST00000560829 C1orf123Q9NWV4 160 aa10.89□□□□□ -0.67
SNX1-211ENST00000560829 TAAR3PQ9P1P4 343 aa10.89□□□□□ -0.67
SNX1-211ENST00000560829 ZZEF1O43149 2961 aa10.88□□□□□ -0.67
SNX1-211ENST00000560829 CACNA1AO00555 2505 aa10.88□□□□□ -0.67
SNX1-211ENST00000560829 SRRM5B3KS81 715 aa10.88□□□□□ -0.67
SNX1-211ENST00000560829 CCL21O00585 134 aa10.88□□□□□ -0.67
SNX1-211ENST00000560829 ABCD4O14678 606 aa10.88□□□□□ -0.67
SNX1-211ENST00000560829 WNT9BO14905 357 aa10.88□□□□□ -0.67
SNX1-211ENST00000560829 SNAPC5O75971 98 aa10.88□□□□□ -0.67
SNX1-211ENST00000560829 CD8AP01732 235 aa10.88□□□□□ -0.67
SNX1-211ENST00000560829 SCTP09683 121 aa10.88□□□□□ -0.67
SNX1-211ENST00000560829 ZNF728P0DKX0 622 aa10.88□□□□□ -0.67
SNX1-211ENST00000560829 BSPH1Q075Z2 132 aa10.88□□□□□ -0.67
SNX1-211ENST00000560829 HERPUD1Q15011 391 aa10.88□□□□□ -0.67
SNX1-211ENST00000560829 SMIM21Q3B7S5 101 aa10.88□□□□□ -0.67
SNX1-211ENST00000560829 LIN54Q6MZP7 749 aa10.88□□□□□ -0.67
SNX1-211ENST00000560829 OR4A4PQ8NGN8 299 aa10.88□□□□□ -0.67
SNX1-211ENST00000560829 PLPPR1Q8TBJ4 325 aa10.88□□□□□ -0.67
SNX1-211ENST00000560829 CASTOR1Q8WTX7 329 aa10.88□□□□□ -0.67
SNX1-211ENST00000560829 PIK3IP1Q96FE7 263 aa10.88□□□□□ -0.67
SNX1-211ENST00000560829 WFIKKN1Q96NZ8 548 aa10.88□□□□□ -0.67
SNX1-211ENST00000560829 TMEM246Q9BRR3 403 aa10.88□□□□□ -0.67
SNX1-211ENST00000560829 GON7Q9BXV9 100 aa10.88□□□□□ -0.67
SNX1-211ENST00000560829 PAIP2BQ9ULR5 123 aaKnown RBP10.88□□□□□ -0.67
SNX1-211ENST00000560829 HSPB11Q9Y547 144 aa10.88□□□□□ -0.67
SNX1-211ENST00000560829 IGKV1-6A0A0C4DH72 117 aa10.87□□□□□ -0.67
SNX1-211ENST00000560829 CRYM-AS1A6NIL9 109 aa10.87□□□□□ -0.67
SNX1-211ENST00000560829 TUSC2O75896 110 aa10.87□□□□□ -0.67
SNX1-211ENST00000560829 PPYP01298 95 aa10.87□□□□□ -0.67
SNX1-211ENST00000560829 TK1P04183 234 aa10.87□□□□□ -0.67
SNX1-211ENST00000560829 AADACP22760 399 aa10.87□□□□□ -0.67
SNX1-211ENST00000560829 KCNJ3P48549 501 aa10.87□□□□□ -0.67
SNX1-211ENST00000560829 HLA-DRB3P79483 266 aa10.87□□□□□ -0.67
SNX1-211ENST00000560829 SLC38A6Q8IZM9 456 aa10.87□□□□□ -0.67
SNX1-211ENST00000560829 COQ8AQ8NI60 647 aa10.87□□□□□ -0.67
SNX1-211ENST00000560829 LRRC29Q8WV35 223 aa10.87□□□□□ -0.67
SNX1-211ENST00000560829 OR2V2Q96R30 315 aa10.87□□□□□ -0.67
SNX1-211ENST00000560829 CABLES2Q9BTV7 478 aa10.87□□□□□ -0.67
SNX1-211ENST00000560829 SLA2Q9H6Q3 261 aa10.87□□□□□ -0.67
SNX1-211ENST00000560829 MBNL3Q9NUK0 354 aaKnown RBP10.87□□□□□ -0.67
SNX1-211ENST00000560829 IL19Q9UHD0 177 aa10.87□□□□□ -0.67
SNX1-211ENST00000560829 ZDHHC8Q9ULC8 765 aa10.87□□□□□ -0.67
SNX1-211ENST00000560829 WIPI2Q9Y4P8 454 aa10.87□□□□□ -0.67
SNX1-211ENST00000560829 hCG_1807616A0A1W2PRN6 198 aa10.87□□□□□ -0.67
SNX1-211ENST00000560829 NPIPB11E5RHQ5 1161 aa10.87□□□□□ -0.67
SNX1-211ENST00000560829 ERVH48-1M5A8F1 160 aa10.87□□□□□ -0.67
SNX1-211ENST00000560829 DIRAS3O95661 229 aa10.87□□□□□ -0.67
SNX1-211ENST00000560829 ADH4P08319 380 aa10.87□□□□□ -0.67
SNX1-211ENST00000560829 ZNF81P51508 661 aa10.87□□□□□ -0.67
SNX1-211ENST00000560829 GMFBP60983 142 aa10.87□□□□□ -0.67
SNX1-211ENST00000560829 ADIPOQQ15848 244 aa10.87□□□□□ -0.67
SNX1-211ENST00000560829 PCSK4Q6UW60 755 aa10.87□□□□□ -0.67
SNX1-211ENST00000560829 RNASE6Q93091 150 aaKnown RBP10.87□□□□□ -0.67
SNX1-211ENST00000560829 RSRP1Q9BUV0 290 aa10.87□□□□□ -0.67
SNX1-211ENST00000560829 RAB18Q9NP72 206 aa10.87□□□□□ -0.67
SNX1-211ENST00000560829 PCDHB10Q9UN67 800 aa10.87□□□□□ -0.67
SNX1-211ENST00000560829 MAP1BP46821 2468 aaKnown RBP10.86□□□□□ -0.67
SNX1-211ENST00000560829 TRBV6-7A0A0A0MS04 114 aa10.86□□□□□ -0.67
SNX1-211ENST00000560829 ANKHD1-EIF4EBP3H7C0V5 636 aaPredicted RBP10.86□□□□□ -0.67
SNX1-211ENST00000560829 SPRY3O43610 288 aa10.86□□□□□ -0.67
SNX1-211ENST00000560829 PSPNO60542 156 aa10.86□□□□□ -0.67
SNX1-211ENST00000560829 ZNF205O95201 554 aa10.86□□□□□ -0.67
SNX1-211ENST00000560829 LHBP01229 141 aa10.86□□□□□ -0.67
SNX1-211ENST00000560829 IGHV1-46P01743 117 aa10.86□□□□□ -0.67
SNX1-211ENST00000560829 RCC1P18754 421 aaPredicted RBP10.86□□□□□ -0.67
SNX1-211ENST00000560829 NFYAP23511 347 aaPredicted RBP10.86□□□□□ -0.67
SNX1-211ENST00000560829 HERV-K104P61576 105 aa10.86□□□□□ -0.67
SNX1-211ENST00000560829 ADORA2A-AS1P86434 159 aa10.86□□□□□ -0.67
SNX1-211ENST00000560829 PAX5Q02548 391 aa10.86□□□□□ -0.67
SNX1-211ENST00000560829 LY6DQ14210 128 aa10.86□□□□□ -0.67
SNX1-211ENST00000560829 ANKRD55Q3KP44 614 aa10.86□□□□□ -0.67
SNX1-211ENST00000560829 NCMAPQ5T1S8 102 aa10.86□□□□□ -0.67
SNX1-211ENST00000560829 SGPP2Q8IWX5 399 aa10.86□□□□□ -0.67
SNX1-211ENST00000560829 GCSAMQ8N6F7 178 aa10.86□□□□□ -0.67
Retrieved 100 of 20,778 RNA–protein pairs in 32 ms