RNA–Protein interactions for RNA: ENST00000560383.5

SNRPA1-210, Transcript of small nuclear ribonucleoprotein polypeptide A', humanhuman

TSL 4

Gene SNRPA1, Length 565 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRPA1-210ENST00000560383 ZNF780AO75290 641 aaPredicted RBP12.29□□□□□ -0.44
SNRPA1-210ENST00000560383 CRHBPP24387 322 aa12.29□□□□□ -0.44
SNRPA1-210ENST00000560383 KCNJ3P48549 501 aa12.29□□□□□ -0.44
SNRPA1-210ENST00000560383 SCN1BQ07699 218 aa12.29□□□□□ -0.44
SNRPA1-210ENST00000560383 SRSF4Q08170 494 aaKnown RBP12.29□□□□□ -0.44
SNRPA1-210ENST00000560383 GPR50Q13585 617 aa12.29□□□□□ -0.44
SNRPA1-210ENST00000560383 LRRC75BQ2VPJ9 315 aa12.29□□□□□ -0.44
SNRPA1-210ENST00000560383 PIGYQ3MUY2 71 aa12.29□□□□□ -0.44
SNRPA1-210ENST00000560383 LDLRAD2Q5SZI1 272 aa12.29□□□□□ -0.44
SNRPA1-210ENST00000560383 DHRS7BQ6IAN0 325 aaPredicted RBP12.29□□□□□ -0.44
SNRPA1-210ENST00000560383 UNQ9370/PRO34162Q6UXP9 181 aa12.29□□□□□ -0.44
SNRPA1-210ENST00000560383 IZUMO2Q6UXV1 221 aa12.29□□□□□ -0.44
SNRPA1-210ENST00000560383 HEPN1Q6WQI6 88 aa12.29□□□□□ -0.44
SNRPA1-210ENST00000560383 MS4A15Q8N5U1 240 aa12.29□□□□□ -0.44
SNRPA1-210ENST00000560383 MALSU1Q96EH3 234 aa12.29□□□□□ -0.44
SNRPA1-210ENST00000560383 SSX3Q99909 188 aa12.29□□□□□ -0.44
SNRPA1-210ENST00000560383 TMEM133Q9H2Q1 129 aa12.29□□□□□ -0.44
SNRPA1-210ENST00000560383 MMP27Q9H306 513 aa12.29□□□□□ -0.44
SNRPA1-210ENST00000560383 GAL3ST2Q9H3Q3 398 aa12.29□□□□□ -0.44
SNRPA1-210ENST00000560383 DSCAML1Q8TD84 2053 aa12.29□□□□□ -0.44
SNRPA1-210ENST00000560383 PRKDCP78527 4128 aaKnown RBP12.28□□□□□ -0.44
SNRPA1-210ENST00000560383 WNK1Q9H4A3 2382 aa12.28□□□□□ -0.44
SNRPA1-210ENST00000560383 IGHV2-26A0A0B4J1V2 119 aa12.28□□□□□ -0.44
SNRPA1-210ENST00000560383 A0A1W2PPK0 400 aa12.28□□□□□ -0.44
SNRPA1-210ENST00000560383 MMP23AO75900 390 aa12.28□□□□□ -0.44
SNRPA1-210ENST00000560383 TSPAN9O75954 239 aa12.28□□□□□ -0.44
SNRPA1-210ENST00000560383 HTR3BO95264 441 aa12.28□□□□□ -0.44
SNRPA1-210ENST00000560383 CGB3P0DN86 165 aa12.28□□□□□ -0.44
SNRPA1-210ENST00000560383 CGB7P0DN87 165 aa12.28□□□□□ -0.44
SNRPA1-210ENST00000560383 MAPK3P27361 379 aaPredicted RBP12.28□□□□□ -0.44
SNRPA1-210ENST00000560383 RBM11P57052 281 aaKnown RBP12.28□□□□□ -0.44
SNRPA1-210ENST00000560383 PDLIM3Q53GG5 364 aaPredicted RBP12.28□□□□□ -0.44
SNRPA1-210ENST00000560383 PAN3Q58A45 887 aaKnown RBP12.28□□□□□ -0.44
SNRPA1-210ENST00000560383 KRBOX4Q5JUW0 171 aa12.28□□□□□ -0.44
SNRPA1-210ENST00000560383 Q6ZSV7 163 aa12.28□□□□□ -0.44
SNRPA1-210ENST00000560383 LHFPL4Q7Z7J7 247 aa12.28□□□□□ -0.44
SNRPA1-210ENST00000560383 TRAPPC6BQ86SZ2 158 aa12.28□□□□□ -0.44
SNRPA1-210ENST00000560383 LINC00596Q86U02 117 aa12.28□□□□□ -0.44
SNRPA1-210ENST00000560383 OSR2Q8N2R0 312 aa12.28□□□□□ -0.44
SNRPA1-210ENST00000560383 PIFOQ8TCI5 191 aa12.28□□□□□ -0.44
SNRPA1-210ENST00000560383 FOXRED1Q96CU9 486 aaPredicted RBP12.28□□□□□ -0.44
SNRPA1-210ENST00000560383 NR1H4Q96RI1 486 aaPredicted RBP12.28□□□□□ -0.44
SNRPA1-210ENST00000560383 LINC00574Q9H8X3 128 aa12.28□□□□□ -0.44
SNRPA1-210ENST00000560383 PCDHB16Q9NRJ7 776 aa12.28□□□□□ -0.44
SNRPA1-210ENST00000560383 OR6C3Q9NZP0 311 aa12.28□□□□□ -0.44
SNRPA1-210ENST00000560383 ING4Q9UNL4 249 aa12.28□□□□□ -0.44
SNRPA1-210ENST00000560383 ST3GAL6Q9Y274 331 aa12.28□□□□□ -0.44
SNRPA1-210ENST00000560383 TGP01266 2768 aa12.28□□□□□ -0.44
SNRPA1-210ENST00000560383 NOTCH1P46531 2555 aa12.27□□□□□ -0.44
SNRPA1-210ENST00000560383 H3BUX3 64 aa12.27□□□□□ -0.45
SNRPA1-210ENST00000560383 SC5DO75845 299 aa12.27□□□□□ -0.45
SNRPA1-210ENST00000560383 CSTBP04080 98 aaKnown RBP12.27□□□□□ -0.45
SNRPA1-210ENST00000560383 ARG1P05089 322 aa12.27□□□□□ -0.45
SNRPA1-210ENST00000560383 CD34P28906 385 aa12.27□□□□□ -0.45
SNRPA1-210ENST00000560383 GP2P55259 537 aaKnown RBP12.27□□□□□ -0.45
SNRPA1-210ENST00000560383 KRTAP10-3P60369 221 aa12.27□□□□□ -0.45
SNRPA1-210ENST00000560383 DEFA6Q01524 100 aa12.27□□□□□ -0.45
SNRPA1-210ENST00000560383 GPR176Q14439 515 aa12.27□□□□□ -0.45
SNRPA1-210ENST00000560383 ATXN7L3Q14CW9 347 aaPredicted RBP12.27□□□□□ -0.45
SNRPA1-210ENST00000560383 MINOS1Q5TGZ0 78 aa12.27□□□□□ -0.45
SNRPA1-210ENST00000560383 OR52W1Q6IF63 320 aa12.27□□□□□ -0.45
SNRPA1-210ENST00000560383 DYNAPQ8N1N2 210 aa12.27□□□□□ -0.45
SNRPA1-210ENST00000560383 NKAIN3Q8N8D7 197 aa12.27□□□□□ -0.45
SNRPA1-210ENST00000560383 MRPS24Q96EL2 167 aaKnown RBP12.27□□□□□ -0.45
SNRPA1-210ENST00000560383 CLEC7AQ9BXN2 247 aa12.27□□□□□ -0.45
SNRPA1-210ENST00000560383 PPIL3Q9H2H8 161 aaKnown RBP12.27□□□□□ -0.45
SNRPA1-210ENST00000560383 MINOS1-NBL1R4GNA1 71 aa12.27□□□□□ -0.45
SNRPA1-210ENST00000560383 A0A087X0M5 115 aa12.26□□□□□ -0.45
SNRPA1-210ENST00000560383 A0A1B0GX30 115 aa12.26□□□□□ -0.45
SNRPA1-210ENST00000560383 MEGF11A6BM72 1044 aa12.26□□□□□ -0.45
SNRPA1-210ENST00000560383 ZNF729A6NN14 1252 aaPredicted RBP12.26□□□□□ -0.45
SNRPA1-210ENST00000560383 RGS10O43665 173 aa12.26□□□□□ -0.45
SNRPA1-210ENST00000560383 ATP6V1G2O95670 118 aa12.26□□□□□ -0.45
SNRPA1-210ENST00000560383 MAS1P04201 325 aa12.26□□□□□ -0.45
SNRPA1-210ENST00000560383 CD37P11049 281 aa12.26□□□□□ -0.45
SNRPA1-210ENST00000560383 GTF2F2P13984 249 aa12.26□□□□□ -0.45
SNRPA1-210ENST00000560383 CDK2P24941 298 aa12.26□□□□□ -0.45
SNRPA1-210ENST00000560383 PAX6P26367 422 aa12.26□□□□□ -0.45
SNRPA1-210ENST00000560383 DYNLT3P51808 116 aa12.26□□□□□ -0.45
SNRPA1-210ENST00000560383 TPBGQ13641 420 aa12.26□□□□□ -0.45
SNRPA1-210ENST00000560383 MED22Q15528 200 aa12.26□□□□□ -0.45
SNRPA1-210ENST00000560383 C17orf58Q2M2W7 97 aa12.26□□□□□ -0.45
SNRPA1-210ENST00000560383 MPV17LQ2QL34 196 aa12.26□□□□□ -0.45
SNRPA1-210ENST00000560383 SLC22A6Q4U2R8 563 aa12.26□□□□□ -0.45
SNRPA1-210ENST00000560383 ACSM3Q53FZ2 586 aa12.26□□□□□ -0.45
SNRPA1-210ENST00000560383 RSBN1Q5VWQ0 802 aaPredicted RBP12.26□□□□□ -0.45
SNRPA1-210ENST00000560383 PRSS48Q7RTY5 328 aa12.26□□□□□ -0.45
SNRPA1-210ENST00000560383 RTN4RL2Q86UN3 420 aa12.26□□□□□ -0.45
SNRPA1-210ENST00000560383 OR4P4Q8NGL7 312 aa12.26□□□□□ -0.45
SNRPA1-210ENST00000560383 PHYHIPQ92561 330 aa12.26□□□□□ -0.45
SNRPA1-210ENST00000560383 MUL1Q969V5 352 aa12.26□□□□□ -0.45
SNRPA1-210ENST00000560383 S100A13Q99584 98 aa12.26□□□□□ -0.45
SNRPA1-210ENST00000560383 UQCC2Q9BRT2 126 aa12.26□□□□□ -0.45
SNRPA1-210ENST00000560383 BARHL1Q9BZE3 327 aa12.26□□□□□ -0.45
SNRPA1-210ENST00000560383 ISYNA1Q9NPH2 558 aa12.26□□□□□ -0.45
SNRPA1-210ENST00000560383 ZNF581Q9P0T4 197 aa12.26□□□□□ -0.45
SNRPA1-210ENST00000560383 KIF25Q9UIL4 384 aa12.26□□□□□ -0.45
SNRPA1-210ENST00000560383 RAB26Q9ULW5 256 aa12.26□□□□□ -0.45
SNRPA1-210ENST00000560383 MRPS28Q9Y2Q9 187 aaKnown RBP12.26□□□□□ -0.45
SNRPA1-210ENST00000560383 KBTBD11-OT1A0A1B0GTJ5 212 aa12.25□□□□□ -0.45
Retrieved 100 of 20,778 RNA–protein pairs in 35.5 ms