RNA–Protein interactions for RNA: ENST00000560127.1

RABGGTA-213, Transcript of Rab geranylgeranyltransferase subunit alpha, humanhuman

TSL 4

Gene RABGGTA, Length 573 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RABGGTA-213ENST00000560127 CXCR4P61073 352 aa9.98□□□□□ -0.81
RABGGTA-213ENST00000560127 ISL1P61371 349 aa9.98□□□□□ -0.81
RABGGTA-213ENST00000560127 ZNF85Q03923 595 aa9.98□□□□□ -0.81
RABGGTA-213ENST00000560127 ZNF91Q05481 1191 aa9.98□□□□□ -0.81
RABGGTA-213ENST00000560127 FOXE3Q13461 319 aa9.98□□□□□ -0.81
RABGGTA-213ENST00000560127 HES1Q14469 280 aa9.98□□□□□ -0.81
RABGGTA-213ENST00000560127 HNF4GQ14541 408 aa9.98□□□□□ -0.81
RABGGTA-213ENST00000560127 LRRC36Q1X8D7 754 aa9.98□□□□□ -0.81
RABGGTA-213ENST00000560127 OGFRL1Q5TC84 451 aaPredicted RBP9.98□□□□□ -0.81
RABGGTA-213ENST00000560127 ASPHD1Q5U4P2 390 aa9.98□□□□□ -0.81
RABGGTA-213ENST00000560127 ZNF322Q6U7Q0 402 aaPredicted RBP9.98□□□□□ -0.81
RABGGTA-213ENST00000560127 C10orf67Q8IYJ2 551 aa9.98□□□□□ -0.81
RABGGTA-213ENST00000560127 OR11H1Q8NG94 326 aa9.98□□□□□ -0.81
RABGGTA-213ENST00000560127 RHOXF1Q8NHV9 184 aa9.98□□□□□ -0.81
RABGGTA-213ENST00000560127 C4orf3Q8WVX3 66 aa9.98□□□□□ -0.81
RABGGTA-213ENST00000560127 CORO2AQ92828 525 aa9.98□□□□□ -0.81
RABGGTA-213ENST00000560127 RPEQ96AT9 228 aa9.98□□□□□ -0.81
RABGGTA-213ENST00000560127 TBX5Q99593 518 aa9.98□□□□□ -0.81
RABGGTA-213ENST00000560127 SEBOXQ9HB31 216 aaPredicted RBP9.98□□□□□ -0.81
RABGGTA-213ENST00000560127 NUFIP1Q9UHK0 495 aaKnown RBP9.98□□□□□ -0.81
RABGGTA-213ENST00000560127 SLC7A11Q9UPY5 501 aa9.98□□□□□ -0.81
RABGGTA-213ENST00000560127 V9GYS6 101 aa9.98□□□□□ -0.81
RABGGTA-213ENST00000560127 KIAA1109Q2LD37 5005 aa9.97□□□□□ -0.81
RABGGTA-213ENST00000560127 IGKV1-27A0A075B6S5 117 aa9.97□□□□□ -0.81
RABGGTA-213ENST00000560127 A0A087X0M5 115 aa9.97□□□□□ -0.81
RABGGTA-213ENST00000560127 TRGV10A0A0A0MS01 117 aa9.97□□□□□ -0.81
RABGGTA-213ENST00000560127 A0A1B0GX30 115 aa9.97□□□□□ -0.81
RABGGTA-213ENST00000560127 FAM230AA0A1W2PPH8 454 aa9.97□□□□□ -0.81
RABGGTA-213ENST00000560127 A0A1W2PPI3 338 aa9.97□□□□□ -0.81
RABGGTA-213ENST00000560127 AP4M1O00189 453 aa9.97□□□□□ -0.81
RABGGTA-213ENST00000560127 ELANEP08246 267 aa9.97□□□□□ -0.81
RABGGTA-213ENST00000560127 GP9P14770 177 aa9.97□□□□□ -0.81
RABGGTA-213ENST00000560127 SPNP16150 400 aa9.97□□□□□ -0.81
RABGGTA-213ENST00000560127 DUSP1P28562 367 aa9.97□□□□□ -0.81
RABGGTA-213ENST00000560127 GPR12P47775 334 aa9.97□□□□□ -0.81
RABGGTA-213ENST00000560127 DEGS2Q6QHC5 323 aa9.97□□□□□ -0.81
RABGGTA-213ENST00000560127 ZNF429Q86V71 674 aa9.97□□□□□ -0.81
RABGGTA-213ENST00000560127 ZNF679Q8IYX0 411 aa9.97□□□□□ -0.81
RABGGTA-213ENST00000560127 OR14K1Q8NGZ2 314 aa9.97□□□□□ -0.81
RABGGTA-213ENST00000560127 NRG4Q8WWG1 115 aa9.97□□□□□ -0.81
RABGGTA-213ENST00000560127 EMG1Q92979 244 aaKnown RBP9.97□□□□□ -0.81
RABGGTA-213ENST00000560127 TOMM40LQ969M1 308 aa9.97□□□□□ -0.81
RABGGTA-213ENST00000560127 ISYNA1Q9NPH2 558 aa9.97□□□□□ -0.81
RABGGTA-213ENST00000560127 SMPD3Q9NY59 655 aaPredicted RBP9.97□□□□□ -0.81
RABGGTA-213ENST00000560127 TAS2R3Q9NYW6 316 aa9.97□□□□□ -0.81
RABGGTA-213ENST00000560127 AKAP8LQ9ULX6 646 aaKnown RBP eCLIP9.97□□□□□ -0.81
RABGGTA-213ENST00000560127 GMPPBQ9Y5P6 360 aa9.97□□□□□ -0.81
RABGGTA-213ENST00000560127 A0A1B0GTI1 187 aa9.96□□□□□ -0.82
RABGGTA-213ENST00000560127 LOC100130705A0A1B0GUX0 176 aa9.96□□□□□ -0.82
RABGGTA-213ENST00000560127 LDLRAD4O15165 306 aa9.96□□□□□ -0.82
RABGGTA-213ENST00000560127 IGKV1D-33P01593 117 aa9.96□□□□□ -0.82
RABGGTA-213ENST00000560127 IGKV1-33P01594 117 aa9.96□□□□□ -0.82
RABGGTA-213ENST00000560127 ADARB1P78563 741 aaKnown RBP9.96□□□□□ -0.82
RABGGTA-213ENST00000560127 CFHR3Q02985 330 aa9.96□□□□□ -0.82
RABGGTA-213ENST00000560127 DIAPH2-AS1Q14236 149 aa9.96□□□□□ -0.82
RABGGTA-213ENST00000560127 SMN1Q16637 294 aaKnown RBP9.96□□□□□ -0.82
RABGGTA-213ENST00000560127 LAIR2Q6ISS4 152 aa9.96□□□□□ -0.82
RABGGTA-213ENST00000560127 SLC25A26Q70HW3 274 aa9.96□□□□□ -0.82
RABGGTA-213ENST00000560127 TRUB1Q8WWH5 349 aaKnown RBP9.96□□□□□ -0.82
RABGGTA-213ENST00000560127 ASB17Q8WXJ9 295 aa9.96□□□□□ -0.82
RABGGTA-213ENST00000560127 LGALS12Q96DT0 336 aa9.96□□□□□ -0.82
RABGGTA-213ENST00000560127 PCDHB16Q9NRJ7 776 aa9.96□□□□□ -0.82
RABGGTA-213ENST00000560127 IMPAD1Q9NX62 359 aa9.96□□□□□ -0.82
RABGGTA-213ENST00000560127 ORC6Q9Y5N6 252 aa9.96□□□□□ -0.82
RABGGTA-213ENST00000560127 RBMY1BA6NDE4 496 aaKnown RBP9.95□□□□□ -0.82
RABGGTA-213ENST00000560127 RBMY1EA6NEQ0 496 aaKnown RBP9.95□□□□□ -0.82
RABGGTA-213ENST00000560127 ZNF254O75437 659 aa9.95□□□□□ -0.82
RABGGTA-213ENST00000560127 GNAO1P09471 354 aa9.95□□□□□ -0.82
RABGGTA-213ENST00000560127 OR8U8P0C7N1 319 aa9.95□□□□□ -0.82
RABGGTA-213ENST00000560127 RBMY1DP0C7P1 496 aaKnown RBP9.95□□□□□ -0.82
RABGGTA-213ENST00000560127 DBTP11182 482 aaKnown RBP9.95□□□□□ -0.82
RABGGTA-213ENST00000560127 GLIPR1P48060 266 aa9.95□□□□□ -0.82
RABGGTA-213ENST00000560127 NPBWR2P48146 333 aa9.95□□□□□ -0.82
RABGGTA-213ENST00000560127 TMED1Q13445 227 aa9.95□□□□□ -0.82
RABGGTA-213ENST00000560127 ZNF146Q15072 292 aa9.95□□□□□ -0.82
RABGGTA-213ENST00000560127 ZNF691Q5VV52 312 aa9.95□□□□□ -0.82
RABGGTA-213ENST00000560127 Q6ZSR3 168 aa9.95□□□□□ -0.82
RABGGTA-213ENST00000560127 LHFPL2Q6ZUX7 228 aa9.95□□□□□ -0.82
RABGGTA-213ENST00000560127 OR10H4Q8NGA5 316 aa9.95□□□□□ -0.82
RABGGTA-213ENST00000560127 OR9G1Q8NH87 305 aa9.95□□□□□ -0.82
RABGGTA-213ENST00000560127 RDH12Q96NR8 316 aa9.95□□□□□ -0.82
RABGGTA-213ENST00000560127 MNTQ99583 582 aa9.95□□□□□ -0.82
RABGGTA-213ENST00000560127 GON7Q9BXV9 100 aa9.95□□□□□ -0.82
RABGGTA-213ENST00000560127 MROQ9BYG7 248 aa9.95□□□□□ -0.82
RABGGTA-213ENST00000560127 ABCG5Q9H222 651 aa9.95□□□□□ -0.82
RABGGTA-213ENST00000560127 AMBNQ9NP70 447 aa9.95□□□□□ -0.82
RABGGTA-213ENST00000560127 RBFOX1Q9NWB1 397 aaKnown RBP9.95□□□□□ -0.82
RABGGTA-213ENST00000560127 H2AFY2Q9P0M6 372 aaPredicted RBP9.95□□□□□ -0.82
RABGGTA-213ENST00000560127 GLS2Q9UI32 602 aa9.95□□□□□ -0.82
RABGGTA-213ENST00000560127 IKZF2Q9UKS7 526 aa9.95□□□□□ -0.82
RABGGTA-213ENST00000560127 EXOGQ9Y2C4 368 aaKnown RBP9.95□□□□□ -0.82
RABGGTA-213ENST00000560127 MYRFQ9Y2G1 1151 aa9.95□□□□□ -0.82
RABGGTA-213ENST00000560127 TMEM14AQ9Y6G1 99 aa9.95□□□□□ -0.82
RABGGTA-213ENST00000560127 R4GMQ9 66 aa9.95□□□□□ -0.82
RABGGTA-213ENST00000560127 DHRS7CA6NNS2 312 aa9.94□□□□□ -0.82
RABGGTA-213ENST00000560127 ZNF670-ZNF695F2Z2N8 137 aa9.94□□□□□ -0.82
RABGGTA-213ENST00000560127 SIRPB1O00241 398 aa9.94□□□□□ -0.82
RABGGTA-213ENST00000560127 IGHG4P01861 327 aa9.94□□□□□ -0.82
RABGGTA-213ENST00000560127 OR2T7P0C7T2 308 aa9.94□□□□□ -0.82
RABGGTA-213ENST00000560127 CALCBP10092 127 aa9.94□□□□□ -0.82
Retrieved 100 of 20,778 RNA–protein pairs in 36.5 ms