RNA–Protein interactions for RNA: ENST00000558735.1

CASC4-205, Transcript of cancer susceptibility 4, humanhuman

TSL 3

Gene CASC4, Length 427 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CASC4-205ENST00000558735 LPLP06858 475 aa9.18□□□□□ -0.94
CASC4-205ENST00000558735 RPSAP08865 295 aaKnown RBP9.18□□□□□ -0.94
CASC4-205ENST00000558735 LIMS3P0CW19 117 aa9.18□□□□□ -0.94
CASC4-205ENST00000558735 LIMS4P0CW20 117 aa9.18□□□□□ -0.94
CASC4-205ENST00000558735 VSIG8P0DPA2 414 aa9.18□□□□□ -0.94
CASC4-205ENST00000558735 PTGFRP43088 359 aa9.18□□□□□ -0.94
CASC4-205ENST00000558735 MTNR1BP49286 362 aa9.18□□□□□ -0.94
CASC4-205ENST00000558735 GBX2P52951 348 aaPredicted RBP9.18□□□□□ -0.94
CASC4-205ENST00000558735 RAB40BQ12829 278 aa9.18□□□□□ -0.94
CASC4-205ENST00000558735 MRPL28Q13084 256 aaKnown RBP9.18□□□□□ -0.94
CASC4-205ENST00000558735 ATXN7L3Q14CW9 347 aaPredicted RBP9.18□□□□□ -0.94
CASC4-205ENST00000558735 ABCA11PQ4W5N1 156 aa9.18□□□□□ -0.94
CASC4-205ENST00000558735 TPTE2P1Q5T6R2 138 aa9.18□□□□□ -0.94
CASC4-205ENST00000558735 ASCL4Q6XD76 172 aa9.18□□□□□ -0.94
CASC4-205ENST00000558735 SATL1Q86VE3 508 aa9.18□□□□□ -0.94
CASC4-205ENST00000558735 ZNF565Q8N9K5 539 aa9.18□□□□□ -0.94
CASC4-205ENST00000558735 Q8NFD4 153 aa9.18□□□□□ -0.94
CASC4-205ENST00000558735 PXT1Q8NFP0 134 aa9.18□□□□□ -0.94
CASC4-205ENST00000558735 CNIH3Q8TBE1 160 aa9.18□□□□□ -0.94
CASC4-205ENST00000558735 APH1BQ8WW43 257 aa9.18□□□□□ -0.94
CASC4-205ENST00000558735 RGP1Q92546 391 aaPredicted RBP9.18□□□□□ -0.94
CASC4-205ENST00000558735 SGCDQ92629 289 aa9.18□□□□□ -0.94
CASC4-205ENST00000558735 SLC25A33Q9BSK2 321 aa9.18□□□□□ -0.94
CASC4-205ENST00000558735 C9orf16Q9BUW7 83 aa9.18□□□□□ -0.94
CASC4-205ENST00000558735 NCOR1P1Q9H4R4 102 aa9.18□□□□□ -0.94
CASC4-205ENST00000558735 LINC00574Q9H8X3 128 aa9.18□□□□□ -0.94
CASC4-205ENST00000558735 S100A14Q9HCY8 104 aa9.18□□□□□ -0.94
CASC4-205ENST00000558735 INPP5EQ9NRR6 644 aa9.18□□□□□ -0.94
CASC4-205ENST00000558735 OR6C3Q9NZP0 311 aa9.18□□□□□ -0.94
CASC4-205ENST00000558735 DHDHQ9UQ10 334 aa9.18□□□□□ -0.94
CASC4-205ENST00000558735 A0A1W2PRX2 142 aa9.17□□□□□ -0.94
CASC4-205ENST00000558735 FAM90A18PA6NE21 464 aa9.17□□□□□ -0.94
CASC4-205ENST00000558735 FAM90A16PA6NEW6 464 aa9.17□□□□□ -0.94
CASC4-205ENST00000558735 FAM90A20PA6NIJ5 464 aa9.17□□□□□ -0.94
CASC4-205ENST00000558735 SH2D7A6NKC9 451 aaPredicted RBP9.17□□□□□ -0.94
CASC4-205ENST00000558735 FAM90A9PA6NNJ1 464 aa9.17□□□□□ -0.94
CASC4-205ENST00000558735 FAM90A12PA8MX19 464 aa9.17□□□□□ -0.94
CASC4-205ENST00000558735 FAM90A5PA8MXJ8 464 aa9.17□□□□□ -0.94
CASC4-205ENST00000558735 GABRPO00591 440 aa9.17□□□□□ -0.94
CASC4-205ENST00000558735 WBP4O75554 376 aaKnown RBP9.17□□□□□ -0.94
CASC4-205ENST00000558735 OR2F2O95006 317 aa9.17□□□□□ -0.94
CASC4-205ENST00000558735 IGHV3-7P01780 117 aa9.17□□□□□ -0.94
CASC4-205ENST00000558735 ALDOBP05062 364 aa9.17□□□□□ -0.94
CASC4-205ENST00000558735 CCDC159P0C7I6 412 aa9.17□□□□□ -0.94
CASC4-205ENST00000558735 FAM90A15PP0C7V4 464 aa9.17□□□□□ -0.94
CASC4-205ENST00000558735 FAM90A13PP0C7W8 464 aa9.17□□□□□ -0.94
CASC4-205ENST00000558735 FAM90A14PP0C7W9 464 aa9.17□□□□□ -0.94
CASC4-205ENST00000558735 FAM90A24PP0C7X0 464 aa9.17□□□□□ -0.94
CASC4-205ENST00000558735 RAB3AP20336 220 aa9.17□□□□□ -0.94
CASC4-205ENST00000558735 NFYBP25208 207 aa9.17□□□□□ -0.94
CASC4-205ENST00000558735 CEACAM3P40198 252 aa9.17□□□□□ -0.94
CASC4-205ENST00000558735 OR3A4PP47883 348 aa9.17□□□□□ -0.94
CASC4-205ENST00000558735 SOX2P48431 317 aa9.17□□□□□ -0.94
CASC4-205ENST00000558735 SMN1Q16637 294 aaKnown RBP9.17□□□□□ -0.94
CASC4-205ENST00000558735 ZSCAN26Q16670 478 aa9.17□□□□□ -0.94
CASC4-205ENST00000558735 KLHL22Q53GT1 634 aa9.17□□□□□ -0.94
CASC4-205ENST00000558735 LPCAT4Q643R3 524 aa9.17□□□□□ -0.94
CASC4-205ENST00000558735 XAF1Q6GPH4 301 aa9.17□□□□□ -0.94
CASC4-205ENST00000558735 C10orf99Q6UWK7 81 aa9.17□□□□□ -0.94
CASC4-205ENST00000558735 CCDC121Q6ZUS5 278 aa9.17□□□□□ -0.94
CASC4-205ENST00000558735 C10orf67Q8IYJ2 551 aa9.17□□□□□ -0.94
CASC4-205ENST00000558735 OR13A1Q8NGR1 328 aa9.17□□□□□ -0.94
CASC4-205ENST00000558735 OR10K1Q8NGX5 313 aa9.17□□□□□ -0.94
CASC4-205ENST00000558735 CREB3L1Q96BA8 519 aa9.17□□□□□ -0.94
CASC4-205ENST00000558735 PHF21AQ96BD5 680 aa9.17□□□□□ -0.94
CASC4-205ENST00000558735 KIRREL1Q96J84 757 aa9.17□□□□□ -0.94
CASC4-205ENST00000558735 AKR1E2Q96JD6 320 aa9.17□□□□□ -0.94
CASC4-205ENST00000558735 BARHL1Q9BZE3 327 aa9.17□□□□□ -0.94
CASC4-205ENST00000558735 FGF20Q9NP95 211 aaPredicted RBP9.17□□□□□ -0.94
CASC4-205ENST00000558735 ZNF581Q9P0T4 197 aa9.17□□□□□ -0.94
CASC4-205ENST00000558735 KIF25Q9UIL4 384 aa9.17□□□□□ -0.94
CASC4-205ENST00000558735 RPL36Q9Y3U8 105 aaKnown RBP9.17□□□□□ -0.94
CASC4-205ENST00000558735 SIRT4Q9Y6E7 314 aaPredicted RBP9.17□□□□□ -0.94
CASC4-205ENST00000558735 MEIKINA0A087WXM9 373 aa9.16□□□□□ -0.94
CASC4-205ENST00000558735 TCRBV4S1A1TA0A5B7 111 aa9.16□□□□□ -0.94
CASC4-205ENST00000558735 OOSP1A8MZH6 123 aa9.16□□□□□ -0.94
CASC4-205ENST00000558735 NPIPB11E5RHQ5 1161 aa9.16□□□□□ -0.94
CASC4-205ENST00000558735 J3QR06 171 aa9.16□□□□□ -0.94
CASC4-205ENST00000558735 HSPB6O14558 160 aa9.16□□□□□ -0.94
CASC4-205ENST00000558735 C21orf33P30042 268 aaPredicted RBP9.16□□□□□ -0.94
CASC4-205ENST00000558735 ETV1P50549 477 aa9.16□□□□□ -0.94
CASC4-205ENST00000558735 RBM39Q14498 530 aaKnown RBP9.16□□□□□ -0.94
CASC4-205ENST00000558735 PAN3Q58A45 887 aaKnown RBP9.16□□□□□ -0.94
CASC4-205ENST00000558735 RSBN1Q5VWQ0 802 aaPredicted RBP9.16□□□□□ -0.94
CASC4-205ENST00000558735 THNSL2Q86YJ6 484 aa9.16□□□□□ -0.94
CASC4-205ENST00000558735 PQLC1Q8N2U9 271 aa9.16□□□□□ -0.94
CASC4-205ENST00000558735 OR9G1Q8NH87 305 aa9.16□□□□□ -0.94
CASC4-205ENST00000558735 RFESDQ8TAC1 157 aa9.16□□□□□ -0.94
CASC4-205ENST00000558735 PLPPR1Q8TBJ4 325 aa9.16□□□□□ -0.94
CASC4-205ENST00000558735 TNFAIP8L1Q8WVP5 186 aa9.16□□□□□ -0.94
CASC4-205ENST00000558735 TSEN15Q8WW01 171 aaKnown RBP9.16□□□□□ -0.94
CASC4-205ENST00000558735 CAPSLQ8WWF8 208 aa9.16□□□□□ -0.94
CASC4-205ENST00000558735 LEAP2Q969E1 77 aa9.16□□□□□ -0.94
CASC4-205ENST00000558735 GPER1Q99527 375 aa9.16□□□□□ -0.94
CASC4-205ENST00000558735 JAM3Q9BX67 310 aa9.16□□□□□ -0.94
CASC4-205ENST00000558735 TAS2R4Q9NYW5 299 aa9.16□□□□□ -0.94
CASC4-205ENST00000558735 CALYQ9NYX4 217 aa9.16□□□□□ -0.94
CASC4-205ENST00000558735 IDI2-AS1Q9NZ38 188 aa9.16□□□□□ -0.94
CASC4-205ENST00000558735 PSG11Q9UQ72 335 aa9.16□□□□□ -0.94
CASC4-205ENST00000558735 TRAV39A0A0B4J263 110 aa9.15□□□□□ -0.94
Retrieved 100 of 20,778 RNA–protein pairs in 31.4 ms